Protein–RNA interactions for Protein: Q99315

TY3B-G, Transposon Ty3-G Gag-Pol polyprotein, yeastyeast

Predictions only

Length 1,547 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY3B-GQ99315 YML009W-BYML009W-B 477 nt31.14■■■□□ 2.57
TY3B-GQ99315 NSR1YGR159C 1245 nt30■■■□□ 2.39
TY3B-GQ99315 NOP1YDL014W 984 nt29.84■■■□□ 2.37
TY3B-GQ99315 YKL036CYKL036C 393 nt28.24■■■□□ 2.11
TY3B-GQ99315 MDJ1YFL016C 1536 nt26.89■■□□□ 1.9
TY3B-GQ99315 YJL027CYJL027C 417 nt26.47■■□□□ 1.83
TY3B-GQ99315 Q0297Q0297 156 nt26.44■■□□□ 1.82
TY3B-GQ99315 SRX1YKL086W 384 nt26.35■■□□□ 1.81
TY3B-GQ99315 SCS3YGL126W 1143 nt26.19■■□□□ 1.78
TY3B-GQ99315 YCR051WYCR051W 669 nt25.17■■□□□ 1.62
TY3B-GQ99315 YOL085CYOL085C 342 nt24.41■■□□□ 1.5
TY3B-GQ99315 PKP1YIL042C 1185 nt24.35■■□□□ 1.49
TY3B-GQ99315 DBP2YNL112W 1641 nt23.83■■□□□ 1.41
TY3B-GQ99315 RPP1BYDL130W 321 nt23.75■■□□□ 1.39
TY3B-GQ99315 TRN1tP(UGG)A 72 nt23.74■■□□□ 1.39
TY3B-GQ99315 SUF9tP(UGG)F 72 nt23.74■■□□□ 1.39
TY3B-GQ99315 SUF8tP(UGG)H 72 nt23.74■■□□□ 1.39
TY3B-GQ99315 tP(UGG)LtP(UGG)L 72 nt23.74■■□□□ 1.39
TY3B-GQ99315 SUF7tP(UGG)M 72 nt23.74■■□□□ 1.39
TY3B-GQ99315 tP(UGG)N1tP(UGG)N1 72 nt23.74■■□□□ 1.39
TY3B-GQ99315 tP(UGG)N2tP(UGG)N2 72 nt23.74■■□□□ 1.39
TY3B-GQ99315 tP(UGG)O1tP(UGG)O1 72 nt23.74■■□□□ 1.39
TY3B-GQ99315 SUF11tP(UGG)O2 72 nt23.74■■□□□ 1.39
TY3B-GQ99315 SCJ1YMR214W 1134 nt23.52■■□□□ 1.36
TY3B-GQ99315 CCC1YLR220W 969 nt23.51■■□□□ 1.35
TY3B-GQ99315 ATS1YAL020C 1002 nt23.28■■□□□ 1.32
TY3B-GQ99315 PET122YER153C 765 nt22.96■■□□□ 1.27
TY3B-GQ99315 tP(UGG)O3tP(UGG)O3 72 nt22.51■■□□□ 1.19
TY3B-GQ99315 SCR1SCR1 522 nt22.47■■□□□ 1.19
TY3B-GQ99315 YBR190WYBR190W 312 nt22.31■■□□□ 1.16
TY3B-GQ99315 RVS167YDR388W 1449 nt22.17■■□□□ 1.14
TY3B-GQ99315 RRN5YLR141W 1092 nt22.11■■□□□ 1.13
TY3B-GQ99315 RTC3YHR087W 336 nt21.98■■□□□ 1.11
TY3B-GQ99315 RSB1YOR049C 1065 nt21.93■■□□□ 1.1
TY3B-GQ99315 YER088W-BYER088W-B 147 nt21.72■■□□□ 1.07
TY3B-GQ99315 SHR5YOL110W 714 nt21.62■■□□□ 1.05
TY3B-GQ99315 YDJ1YNL064C 1230 nt21.55■■□□□ 1.04
TY3B-GQ99315 PST2YDR032C 597 nt21.44■■□□□ 1.02
TY3B-GQ99315 GAR1YHR089C 618 nt21.27■■□□□ 1
TY3B-GQ99315 DEP1YAL013W 1218 nt21.19■□□□□ 0.98
TY3B-GQ99315 YKL097CYKL097C 411 nt20.96■□□□□ 0.95
TY3B-GQ99315 URN1YPR152C 1398 nt20.89■□□□□ 0.94
TY3B-GQ99315 SHU1YHL006C 453 nt20.73■□□□□ 0.91
TY3B-GQ99315 YNL208WYNL208W 600 nt20.48■□□□□ 0.87
TY3B-GQ99315 TIR1YER011W 765 nt20.47■□□□□ 0.87
TY3B-GQ99315 YAL037C-BYAL037C-B 975 nt20.43■□□□□ 0.86
TY3B-GQ99315 SRB2YHR041C 633 nt20.37■□□□□ 0.85
TY3B-GQ99315 RPN10YHR200W 807 nt20.37■□□□□ 0.85
TY3B-GQ99315 OPI9YLR338W 858 nt20.3■□□□□ 0.84
TY3B-GQ99315 SAH1YER043C 1350 nt20.3■□□□□ 0.84
TY3B-GQ99315 SSA1YAL005C 1929 nt20.26■□□□□ 0.83
TY3B-GQ99315 YOR139CYOR139C 393 nt20.22■□□□□ 0.83
TY3B-GQ99315 PUT4YOR348C 1884 nt20.13■□□□□ 0.81
TY3B-GQ99315 MNP1YGL068W 585 nt20.04■□□□□ 0.8
TY3B-GQ99315 ARE1YCR048W 1833 nt20■□□□□ 0.79
TY3B-GQ99315 YJR120WYJR120W 351 nt19.99■□□□□ 0.79
TY3B-GQ99315 YHR049C-AYHR049C-A 297 nt19.9■□□□□ 0.78
TY3B-GQ99315 WWM1YFL010C 636 nt19.83■□□□□ 0.77
TY3B-GQ99315 YJR018WYJR018W 363 nt19.82■□□□□ 0.76
TY3B-GQ99315 NPL3YDR432W 1245 nt19.77■□□□□ 0.76
TY3B-GQ99315 HOM6YJR139C 1080 nt19.69■□□□□ 0.74
TY3B-GQ99315 PUN1YLR414C 792 nt19.65■□□□□ 0.74
TY3B-GQ99315 POA1YBR022W 534 nt19.57■□□□□ 0.72
TY3B-GQ99315 YGR021WYGR021W 873 nt19.54■□□□□ 0.72
TY3B-GQ99315 PTC2YER089C 1395 nt19.46■□□□□ 0.71
TY3B-GQ99315 SSA3YBL075C 1950 nt19.45■□□□□ 0.7
TY3B-GQ99315 YOL037CYOL037C 354 nt19.43■□□□□ 0.7
TY3B-GQ99315 RPP2BYDR382W 333 nt19.4■□□□□ 0.7
TY3B-GQ99315 BUD23YCR047C 828 nt19.38■□□□□ 0.69
TY3B-GQ99315 RKM5YLR137W 1104 nt19.38■□□□□ 0.69
TY3B-GQ99315 YFL021C-AYFL021C-A 855 nt19.25■□□□□ 0.67
TY3B-GQ99315 FIS1YIL065C 468 nt19.24■□□□□ 0.67
TY3B-GQ99315 BDH2YAL061W 1254 nt19.21■□□□□ 0.67
TY3B-GQ99315 BSC6YOL137W 1494 nt19.15■□□□□ 0.66
TY3B-GQ99315 tM(CAU)CtM(CAU)C 72 nt19.15■□□□□ 0.66
TY3B-GQ99315 IMT4tM(CAU)E 72 nt19.15■□□□□ 0.66
TY3B-GQ99315 IMT3tM(CAU)J3 72 nt19.15■□□□□ 0.66
TY3B-GQ99315 IMT1tM(CAU)O1 72 nt19.15■□□□□ 0.66
TY3B-GQ99315 IMT2tM(CAU)P 72 nt19.15■□□□□ 0.66
TY3B-GQ99315 FPR4YLR449W 1179 nt19.05■□□□□ 0.64
TY3B-GQ99315 YBL100CYBL100C 315 nt19.05■□□□□ 0.64
TY3B-GQ99315 NAB2YGL122C 1578 nt19.04■□□□□ 0.64
TY3B-GQ99315 PHO4YFR034C 939 nt18.99■□□□□ 0.63
TY3B-GQ99315 PUS2YGL063W 1113 nt18.95■□□□□ 0.62
TY3B-GQ99315 DAL1YIR027C 1383 nt18.92■□□□□ 0.62
TY3B-GQ99315 YLR281CYLR281C 468 nt18.9■□□□□ 0.62
TY3B-GQ99315 WHI5YOR083W 888 nt18.84■□□□□ 0.61
TY3B-GQ99315 YLR236CYLR236C 324 nt18.82■□□□□ 0.6
TY3B-GQ99315 INM2YDR287W 879 nt18.75■□□□□ 0.59
TY3B-GQ99315 MOT3YMR070W 1473 nt18.75■□□□□ 0.59
TY3B-GQ99315 LSM3YLR438C-A 270 nt18.74■□□□□ 0.59
TY3B-GQ99315 FUN26YAL022C 1554 nt18.74■□□□□ 0.59
TY3B-GQ99315 YPR011CYPR011C 981 nt18.69■□□□□ 0.58
TY3B-GQ99315 FMP45YDL222C 930 nt18.63■□□□□ 0.57
TY3B-GQ99315 TRM9YML014W 840 nt18.59■□□□□ 0.57
TY3B-GQ99315 YLR154C-GYLR154C-G 150 nt18.54■□□□□ 0.56
TY3B-GQ99315 DSK2YMR276W 1122 nt18.52■□□□□ 0.56
TY3B-GQ99315 CCT6YDR188W 1641 nt18.51■□□□□ 0.55
TY3B-GQ99315 LPX1YOR084W 1164 nt18.4■□□□□ 0.54
TY3B-GQ99315 YJL152WYJL152W 360 nt18.34■□□□□ 0.53
Retrieved 100 of 7,029 protein–RNA pairs in 13.9 ms