Protein–RNA interactions for Protein: P04050

RPO21, DNA-directed RNA polymerase II subunit RPB1, yeastyeast

Known RBP Predictions only

Length 1,733 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPO21P04050 YML009W-BYML009W-B 477 nt32.17■■■□□ 2.74
RPO21P04050 NOP1YDL014W 984 nt30.92■■■□□ 2.54
RPO21P04050 NSR1YGR159C 1245 nt30.62■■■□□ 2.49
RPO21P04050 YKL036CYKL036C 393 nt29.65■■■□□ 2.34
RPO21P04050 YJL027CYJL027C 417 nt27.8■■■□□ 2.04
RPO21P04050 SCS3YGL126W 1143 nt27.64■■■□□ 2.02
RPO21P04050 Q0297Q0297 156 nt27.56■■■□□ 2
RPO21P04050 SRX1YKL086W 384 nt27.42■■□□□ 1.98
RPO21P04050 MDJ1YFL016C 1536 nt27.1■■□□□ 1.93
RPO21P04050 YCR051WYCR051W 669 nt26.14■■□□□ 1.78
RPO21P04050 YOL085CYOL085C 342 nt25.49■■□□□ 1.67
RPO21P04050 PKP1YIL042C 1185 nt25.4■■□□□ 1.66
RPO21P04050 SCJ1YMR214W 1134 nt25■■□□□ 1.59
RPO21P04050 RPP1BYDL130W 321 nt24.71■■□□□ 1.55
RPO21P04050 ATS1YAL020C 1002 nt24.61■■□□□ 1.53
RPO21P04050 TRN1tP(UGG)A 72 nt24.44■■□□□ 1.5
RPO21P04050 SUF9tP(UGG)F 72 nt24.44■■□□□ 1.5
RPO21P04050 SUF8tP(UGG)H 72 nt24.44■■□□□ 1.5
RPO21P04050 tP(UGG)LtP(UGG)L 72 nt24.44■■□□□ 1.5
RPO21P04050 SUF7tP(UGG)M 72 nt24.44■■□□□ 1.5
RPO21P04050 tP(UGG)N1tP(UGG)N1 72 nt24.44■■□□□ 1.5
RPO21P04050 tP(UGG)N2tP(UGG)N2 72 nt24.44■■□□□ 1.5
RPO21P04050 tP(UGG)O1tP(UGG)O1 72 nt24.44■■□□□ 1.5
RPO21P04050 SUF11tP(UGG)O2 72 nt24.44■■□□□ 1.5
RPO21P04050 DBP2YNL112W 1641 nt24.14■■□□□ 1.45
RPO21P04050 CCC1YLR220W 969 nt24.1■■□□□ 1.45
RPO21P04050 PET122YER153C 765 nt23.83■■□□□ 1.41
RPO21P04050 SCR1SCR1 522 nt23.51■■□□□ 1.35
RPO21P04050 tP(UGG)O3tP(UGG)O3 72 nt23.25■■□□□ 1.31
RPO21P04050 RTC3YHR087W 336 nt23.08■■□□□ 1.29
RPO21P04050 RRN5YLR141W 1092 nt22.96■■□□□ 1.27
RPO21P04050 RSB1YOR049C 1065 nt22.96■■□□□ 1.27
RPO21P04050 RVS167YDR388W 1449 nt22.66■■□□□ 1.22
RPO21P04050 PST2YDR032C 597 nt22.6■■□□□ 1.21
RPO21P04050 YER088W-BYER088W-B 147 nt22.56■■□□□ 1.2
RPO21P04050 YBR190WYBR190W 312 nt22.4■■□□□ 1.18
RPO21P04050 YKL097CYKL097C 411 nt22.37■■□□□ 1.17
RPO21P04050 YDJ1YNL064C 1230 nt22.27■■□□□ 1.16
RPO21P04050 SHR5YOL110W 714 nt22.14■■□□□ 1.13
RPO21P04050 GAR1YHR089C 618 nt21.87■■□□□ 1.09
RPO21P04050 SHU1YHL006C 453 nt21.78■■□□□ 1.08
RPO21P04050 DEP1YAL013W 1218 nt21.52■■□□□ 1.04
RPO21P04050 YOR139CYOR139C 393 nt21.46■■□□□ 1.03
RPO21P04050 YAL037C-BYAL037C-B 975 nt21.36■■□□□ 1.01
RPO21P04050 URN1YPR152C 1398 nt21.18■□□□□ 0.98
RPO21P04050 TIR1YER011W 765 nt21.04■□□□□ 0.96
RPO21P04050 NPL3YDR432W 1245 nt20.98■□□□□ 0.95
RPO21P04050 MNP1YGL068W 585 nt20.87■□□□□ 0.93
RPO21P04050 YNL208WYNL208W 600 nt20.86■□□□□ 0.93
RPO21P04050 SRB2YHR041C 633 nt20.84■□□□□ 0.93
RPO21P04050 RPN10YHR200W 807 nt20.76■□□□□ 0.91
RPO21P04050 SSA1YAL005C 1929 nt20.7■□□□□ 0.9
RPO21P04050 WWM1YFL010C 636 nt20.47■□□□□ 0.87
RPO21P04050 OPI9YLR338W 858 nt20.47■□□□□ 0.87
RPO21P04050 YOL037CYOL037C 354 nt20.47■□□□□ 0.87
RPO21P04050 HOM6YJR139C 1080 nt20.46■□□□□ 0.87
RPO21P04050 YGR021WYGR021W 873 nt20.36■□□□□ 0.85
RPO21P04050 SAH1YER043C 1350 nt20.35■□□□□ 0.85
RPO21P04050 YJR120WYJR120W 351 nt20.33■□□□□ 0.84
RPO21P04050 tM(CAU)CtM(CAU)C 72 nt20.22■□□□□ 0.83
RPO21P04050 IMT4tM(CAU)E 72 nt20.22■□□□□ 0.83
RPO21P04050 IMT3tM(CAU)J3 72 nt20.22■□□□□ 0.83
RPO21P04050 IMT1tM(CAU)O1 72 nt20.22■□□□□ 0.83
RPO21P04050 IMT2tM(CAU)P 72 nt20.22■□□□□ 0.83
RPO21P04050 YJR018WYJR018W 363 nt20.11■□□□□ 0.81
RPO21P04050 RKM5YLR137W 1104 nt20.1■□□□□ 0.81
RPO21P04050 MOT3YMR070W 1473 nt20■□□□□ 0.79
RPO21P04050 PUS2YGL063W 1113 nt19.95■□□□□ 0.78
RPO21P04050 YFL021C-AYFL021C-A 855 nt19.92■□□□□ 0.78
RPO21P04050 ARE1YCR048W 1833 nt19.88■□□□□ 0.77
RPO21P04050 YHR049C-AYHR049C-A 297 nt19.88■□□□□ 0.77
RPO21P04050 SSA3YBL075C 1950 nt19.86■□□□□ 0.77
RPO21P04050 PUT4YOR348C 1884 nt19.85■□□□□ 0.77
RPO21P04050 PUN1YLR414C 792 nt19.85■□□□□ 0.77
RPO21P04050 RPP2BYDR382W 333 nt19.8■□□□□ 0.76
RPO21P04050 YLR281CYLR281C 468 nt19.78■□□□□ 0.76
RPO21P04050 BSC6YOL137W 1494 nt19.75■□□□□ 0.75
RPO21P04050 WHI5YOR083W 888 nt19.68■□□□□ 0.74
RPO21P04050 BDH2YAL061W 1254 nt19.68■□□□□ 0.74
RPO21P04050 YLR236CYLR236C 324 nt19.65■□□□□ 0.74
RPO21P04050 FMP45YDL222C 930 nt19.61■□□□□ 0.73
RPO21P04050 PTC2YER089C 1395 nt19.5■□□□□ 0.71
RPO21P04050 YPR011CYPR011C 981 nt19.48■□□□□ 0.71
RPO21P04050 DSK2YMR276W 1122 nt19.39■□□□□ 0.69
RPO21P04050 BUD23YCR047C 828 nt19.36■□□□□ 0.69
RPO21P04050 POA1YBR022W 534 nt19.35■□□□□ 0.69
RPO21P04050 YBL100CYBL100C 315 nt19.34■□□□□ 0.69
RPO21P04050 FIS1YIL065C 468 nt19.33■□□□□ 0.68
RPO21P04050 MRPL8YJL063C 717 nt19.22■□□□□ 0.67
RPO21P04050 LSM3YLR438C-A 270 nt19.21■□□□□ 0.67
RPO21P04050 LPX1YOR084W 1164 nt19.2■□□□□ 0.66
RPO21P04050 YCH1YGR203W 447 nt19.2■□□□□ 0.66
RPO21P04050 YLR154C-GYLR154C-G 150 nt19.19■□□□□ 0.66
RPO21P04050 PHO4YFR034C 939 nt19.14■□□□□ 0.65
RPO21P04050 UBX6YJL048C 1191 nt19.13■□□□□ 0.65
RPO21P04050 FPR4YLR449W 1179 nt19.12■□□□□ 0.65
RPO21P04050 NAB2YGL122C 1578 nt19.11■□□□□ 0.65
RPO21P04050 IMP2'YIL154C 1041 nt19.1■□□□□ 0.65
RPO21P04050 RTG1YOL067C 534 nt19.09■□□□□ 0.65
RPO21P04050 SPP1YPL138C 1062 nt19.09■□□□□ 0.65
Retrieved 100 of 7,029 protein–RNA pairs in 12.1 ms