RNA–Protein interactions for RNA: YNL172W

APC1, Transcript of Largest subunit of the Anaphase-Promoting Complex/Cyclosome, yeastyeast

Gene APC1, Length 5,247 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
APC1YNL172W INO80P53115 1489 aa7.64□□□□□ -1.19
APC1YNL172W MTC1P47018 478 aaKnown RBP7.57□□□□□ -1.2
APC1YNL172W RSE1Q04693 1361 aaKnown RBP7.35□□□□□ -1.23
APC1YNL172W SPA2P23201 1466 aaKnown RBP7.27□□□□□ -1.25
APC1YNL172W TCB3Q03640 1545 aaKnown RBP7.21□□□□□ -1.26
APC1YNL172W KOG1P38873 1557 aa7.12□□□□□ -1.27
APC1YNL172W MON2P48563 1636 aaPredicted RBP7.04□□□□□ -1.28
APC1YNL172W SGS1P35187 1447 aa7.01□□□□□ -1.29
APC1YNL172W RQC2Q12532 1038 aaKnown RBP7□□□□□ -1.29
APC1YNL172W DRS1P32892 752 aaKnown RBP6.94□□□□□ -1.3
APC1YNL172W DNA2P38859 1522 aa6.87□□□□□ -1.31
APC1YNL172W SWR1Q05471 1514 aa6.82□□□□□ -1.32
APC1YNL172W SPT6P23615 1451 aaKnown RBP6.79□□□□□ -1.32
APC1YNL172W MIF2P35201 549 aa6.78□□□□□ -1.32
APC1YNL172W TAF7Q05021 590 aa6.78□□□□□ -1.32
APC1YNL172W BUD4P47136 1447 aa6.76□□□□□ -1.33
APC1YNL172W SCT1P32784 759 aa6.72□□□□□ -1.33
APC1YNL172W RTT106P40161 455 aa6.71□□□□□ -1.33
APC1YNL172W TAF2P23255 1407 aa6.69□□□□□ -1.34
APC1YNL172W SKI3P17883 1432 aaKnown RBP6.69□□□□□ -1.34
APC1YNL172W ABP1P15891 592 aaKnown RBP6.67□□□□□ -1.34
APC1YNL172W URN1Q06525 465 aaKnown RBP6.67□□□□□ -1.34
APC1YNL172W ECM5Q03214 1411 aa6.65□□□□□ -1.34
APC1YNL172W THO2P53552 1597 aaKnown RBP6.65□□□□□ -1.35
APC1YNL172W NAP1P25293 417 aaKnown RBP6.55□□□□□ -1.36
APC1YNL172W HSL1P34244 1518 aa6.53□□□□□ -1.36
APC1YNL172W XRN1P22147 1528 aaKnown RBP6.52□□□□□ -1.37
APC1YNL172W STH1P32597 1359 aa6.5□□□□□ -1.37
APC1YNL172W TY1B-DR4Q07793 1604 aa6.49□□□□□ -1.37
APC1YNL172W MDS3P53094 1487 aa6.49□□□□□ -1.37
APC1YNL172W TRM732Q03496 1420 aa6.49□□□□□ -1.37
APC1YNL172W DRS2P39524 1355 aa6.48□□□□□ -1.37
APC1YNL172W BPT1P14772 1559 aa6.48□□□□□ -1.37
APC1YNL172W LTE1P07866 1435 aa6.46□□□□□ -1.38
APC1YNL172W GEA2P39993 1459 aaKnown RBP6.45□□□□□ -1.38
APC1YNL172W YTA7P40340 1379 aa6.43□□□□□ -1.38
APC1YNL172W MYO2P19524 1574 aaKnown RBP6.42□□□□□ -1.38
APC1YNL172W BFR2Q06631 534 aaKnown RBP6.42□□□□□ -1.38
APC1YNL172W PAF1P38351 445 aa6.41□□□□□ -1.38
APC1YNL172W REV3P14284 1504 aa6.41□□□□□ -1.38
APC1YNL172W HIR3P47171 1648 aa6.39□□□□□ -1.39
APC1YNL172W SIN3P22579 1536 aa6.38□□□□□ -1.39
APC1YNL172W SSN2P38931 1420 aa6.37□□□□□ -1.39
APC1YNL172W SSK2P53599 1579 aa6.36□□□□□ -1.39
APC1YNL172W SMC4Q12267 1418 aa6.35□□□□□ -1.39
APC1YNL172W TOP2P06786 1428 aaKnown RBP6.34□□□□□ -1.39
APC1YNL172W MET10P39692 1035 aa6.34□□□□□ -1.39
APC1YNL172W MET5P47169 1442 aa6.34□□□□□ -1.39
APC1YNL172W MMS1Q06211 1407 aa6.33□□□□□ -1.4
APC1YNL172W YCF1P39109 1515 aaKnown RBP6.33□□□□□ -1.4
APC1YNL172W SAS10Q12136 610 aaPredicted RBP6.31□□□□□ -1.4
APC1YNL172W YFR006WP43590 535 aa6.3□□□□□ -1.4
APC1YNL172W BNR1P40450 1375 aa6.3□□□□□ -1.4
APC1YNL172W IFH1P39520 1085 aa6.3□□□□□ -1.4
APC1YNL172W UFD4P33202 1483 aa6.28□□□□□ -1.4
APC1YNL172W STU1P38198 1513 aa6.27□□□□□ -1.41
APC1YNL172W MRX12P47084 519 aa6.27□□□□□ -1.41
APC1YNL172W YMR196WQ04336 1088 aa6.24□□□□□ -1.41
APC1YNL172W LEU3P08638 886 aa6.23□□□□□ -1.41
APC1YNL172W TRM3Q07527 1436 aa6.23□□□□□ -1.41
APC1YNL172W MMS22Q06164 1454 aa6.22□□□□□ -1.41
APC1YNL172W UBP1P25037 809 aa6.22□□□□□ -1.41
APC1YNL172W ESC1Q03661 1658 aaKnown RBP6.22□□□□□ -1.41
APC1YNL172W NSR1P27476 414 aaKnown RBP RIP-Chip data6.21□□□□□ -1.41not detected
APC1YNL172W CKB1P43639 278 aa6.2□□□□□ -1.42
APC1YNL172W NOP7P53261 605 aaKnown RBP6.19□□□□□ -1.42
APC1YNL172W YPK9Q12697 1472 aa6.18□□□□□ -1.42
APC1YNL172W BUD21Q08492 214 aaPredicted RBP6.18□□□□□ -1.42
APC1YNL172W CHD1P32657 1468 aa6.18□□□□□ -1.42
APC1YNL172W ENP1P38333 483 aaKnown RBP6.16□□□□□ -1.42
APC1YNL172W YJL181WP46987 611 aa6.16□□□□□ -1.42
APC1YNL172W PEP1P32319 1579 aa6.16□□□□□ -1.42
APC1YNL172W ESP1Q03018 1630 aa6.16□□□□□ -1.42
APC1YNL172W PAN1P32521 1480 aa6.16□□□□□ -1.42
APC1YNL172W SCC2Q04002 1493 aa6.14□□□□□ -1.43
APC1YNL172W BUD3P25558 1636 aa6.14□□□□□ -1.43
APC1YNL172W PRI1P10363 409 aa6.14□□□□□ -1.43
APC1YNL172W NUP159P40477 1460 aa6.13□□□□□ -1.43
APC1YNL172W SPP41P38904 1435 aa6.13□□□□□ -1.43
APC1YNL172W VPS15P22219 1454 aa6.12□□□□□ -1.43
APC1YNL172W MYO4P32492 1471 aa6.12□□□□□ -1.43
APC1YNL172W RKR1Q04781 1562 aa6.12□□□□□ -1.43
APC1YNL172W DNF1P32660 1571 aa6.11□□□□□ -1.43
APC1YNL172W NUP170P38181 1502 aa6.09□□□□□ -1.43
APC1YNL172W YAP3P38749 330 aa6.09□□□□□ -1.43
APC1YNL172W ITT1Q04638 464 aa6.07□□□□□ -1.44
APC1YNL172W RPO31P04051 1460 aa6.06□□□□□ -1.44
APC1YNL172W NUP157P40064 1391 aaKnown RBP6.06□□□□□ -1.44
APC1YNL172W CDC25P04821 1589 aa6.05□□□□□ -1.44
APC1YNL172W RRT14P40470 206 aa6.04□□□□□ -1.44
APC1YNL172W TSC11P40061 1430 aa6.03□□□□□ -1.44
APC1YNL172W MAK10Q02197 733 aa6.03□□□□□ -1.44
APC1YNL172W CAT8P39113 1433 aa6.02□□□□□ -1.45
APC1YNL172W PRP40P33203 583 aaKnown RBP6.02□□□□□ -1.45
APC1YNL172W RPA190P10964 1664 aaKnown RBP6.02□□□□□ -1.45
APC1YNL172W PDR10P51533 1564 aa6.02□□□□□ -1.45
APC1YNL172W ATG2P53855 1592 aa6.02□□□□□ -1.45
APC1YNL172W CFT1Q06632 1357 aaKnown RBP6.02□□□□□ -1.45
APC1YNL172W IQG1Q12280 1495 aa6.02□□□□□ -1.45
APC1YNL172W YOR1P53049 1477 aa6.01□□□□□ -1.45
Retrieved 100 of 5,963 RNA–protein pairs in 10.2 ms