Protein–RNA interactions for Protein: P33203

PRP40, Pre-mRNA-processing protein PRP40, yeastyeast

Known RBP Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PRP40P33203 YML009W-BYML009W-B 477 nt26.37■■□□□ 1.81
PRP40P33203 NOP1YDL014W 984 nt25.97■■□□□ 1.75
PRP40P33203 NSR1YGR159C 1245 nt25.57■■□□□ 1.68
PRP40P33203 YKL036CYKL036C 393 nt24.62■■□□□ 1.53
PRP40P33203 YJL027CYJL027C 417 nt23.12■■□□□ 1.29
PRP40P33203 Q0297Q0297 156 nt22.94■■□□□ 1.26
PRP40P33203 SCS3YGL126W 1143 nt22.75■■□□□ 1.23
PRP40P33203 SRX1YKL086W 384 nt22.66■■□□□ 1.22
PRP40P33203 MDJ1YFL016C 1536 nt21.97■■□□□ 1.11
PRP40P33203 YCR051WYCR051W 669 nt21.56■■□□□ 1.04
PRP40P33203 YOL085CYOL085C 342 nt21.27■■□□□ 1
PRP40P33203 SCJ1YMR214W 1134 nt21.12■□□□□ 0.97
PRP40P33203 PKP1YIL042C 1185 nt20.85■□□□□ 0.93
PRP40P33203 RPP1BYDL130W 321 nt20.59■□□□□ 0.89
PRP40P33203 ATS1YAL020C 1002 nt20.56■□□□□ 0.88
PRP40P33203 TRN1tP(UGG)A 72 nt20.05■□□□□ 0.8
PRP40P33203 SUF9tP(UGG)F 72 nt20.05■□□□□ 0.8
PRP40P33203 SUF8tP(UGG)H 72 nt20.05■□□□□ 0.8
PRP40P33203 tP(UGG)LtP(UGG)L 72 nt20.05■□□□□ 0.8
PRP40P33203 SUF7tP(UGG)M 72 nt20.05■□□□□ 0.8
PRP40P33203 tP(UGG)N1tP(UGG)N1 72 nt20.05■□□□□ 0.8
PRP40P33203 tP(UGG)N2tP(UGG)N2 72 nt20.05■□□□□ 0.8
PRP40P33203 tP(UGG)O1tP(UGG)O1 72 nt20.05■□□□□ 0.8
PRP40P33203 SUF11tP(UGG)O2 72 nt20.05■□□□□ 0.8
PRP40P33203 CCC1YLR220W 969 nt19.85■□□□□ 0.77
PRP40P33203 DBP2YNL112W 1641 nt19.7■□□□□ 0.74
PRP40P33203 SCR1SCR1 522 nt19.61■□□□□ 0.73
PRP40P33203 PET122YER153C 765 nt19.56■□□□□ 0.72
PRP40P33203 tP(UGG)O3tP(UGG)O3 72 nt19.21■□□□□ 0.67
PRP40P33203 RTC3YHR087W 336 nt19.17■□□□□ 0.66
PRP40P33203 RRN5YLR141W 1092 nt19.07■□□□□ 0.64
PRP40P33203 RSB1YOR049C 1065 nt18.93■□□□□ 0.62
PRP40P33203 PST2YDR032C 597 nt18.89■□□□□ 0.61
PRP40P33203 RVS167YDR388W 1449 nt18.82■□□□□ 0.6
PRP40P33203 YER088W-BYER088W-B 147 nt18.7■□□□□ 0.58
PRP40P33203 YDJ1YNL064C 1230 nt18.6■□□□□ 0.57
PRP40P33203 YKL097CYKL097C 411 nt18.59■□□□□ 0.57
PRP40P33203 YBR190WYBR190W 312 nt18.58■□□□□ 0.56
PRP40P33203 SHR5YOL110W 714 nt18.3■□□□□ 0.52
PRP40P33203 GAR1YHR089C 618 nt18.04■□□□□ 0.48
PRP40P33203 SHU1YHL006C 453 nt17.95■□□□□ 0.46
PRP40P33203 YOR139CYOR139C 393 nt17.64■□□□□ 0.41
PRP40P33203 DEP1YAL013W 1218 nt17.49■□□□□ 0.39
PRP40P33203 YAL037C-BYAL037C-B 975 nt17.43■□□□□ 0.38
PRP40P33203 NPL3YDR432W 1245 nt17.41■□□□□ 0.38
PRP40P33203 TIR1YER011W 765 nt17.41■□□□□ 0.38
PRP40P33203 YNL208WYNL208W 600 nt17.34■□□□□ 0.37
PRP40P33203 URN1YPR152C 1398 nt17.31■□□□□ 0.36
PRP40P33203 RPN10YHR200W 807 nt17.3■□□□□ 0.36
PRP40P33203 SSA1YAL005C 1929 nt17.01■□□□□ 0.31
PRP40P33203 YOL037CYOL037C 354 nt16.96■□□□□ 0.31
PRP40P33203 YGR021WYGR021W 873 nt16.95■□□□□ 0.3
PRP40P33203 tM(CAU)CtM(CAU)C 72 nt16.91■□□□□ 0.3
PRP40P33203 IMT4tM(CAU)E 72 nt16.91■□□□□ 0.3
PRP40P33203 IMT3tM(CAU)J3 72 nt16.91■□□□□ 0.3
PRP40P33203 IMT1tM(CAU)O1 72 nt16.91■□□□□ 0.3
PRP40P33203 IMT2tM(CAU)P 72 nt16.91■□□□□ 0.3
PRP40P33203 OPI9YLR338W 858 nt16.91■□□□□ 0.3
PRP40P33203 MNP1YGL068W 585 nt16.88■□□□□ 0.29
PRP40P33203 HOM6YJR139C 1080 nt16.87■□□□□ 0.29
PRP40P33203 SRB2YHR041C 633 nt16.8■□□□□ 0.28
PRP40P33203 WWM1YFL010C 636 nt16.74■□□□□ 0.27
PRP40P33203 RKM5YLR137W 1104 nt16.63■□□□□ 0.25
PRP40P33203 SAH1YER043C 1350 nt16.58■□□□□ 0.24
PRP40P33203 MOT3YMR070W 1473 nt16.57■□□□□ 0.24
PRP40P33203 YJR018WYJR018W 363 nt16.57■□□□□ 0.24
PRP40P33203 BSC6YOL137W 1494 nt16.56■□□□□ 0.24
PRP40P33203 PUS2YGL063W 1113 nt16.54■□□□□ 0.24
PRP40P33203 YFL021C-AYFL021C-A 855 nt16.52■□□□□ 0.24
PRP40P33203 RPP2BYDR382W 333 nt16.49■□□□□ 0.23
PRP40P33203 PUN1YLR414C 792 nt16.47■□□□□ 0.23
PRP40P33203 YLR281CYLR281C 468 nt16.45■□□□□ 0.22
PRP40P33203 YJR120WYJR120W 351 nt16.4■□□□□ 0.22
PRP40P33203 WHI5YOR083W 888 nt16.29■□□□□ 0.2
PRP40P33203 PUT4YOR348C 1884 nt16.25■□□□□ 0.19
PRP40P33203 BDH2YAL061W 1254 nt16.24■□□□□ 0.19
PRP40P33203 MRPL8YJL063C 717 nt16.23■□□□□ 0.19
PRP40P33203 SSA3YBL075C 1950 nt16.21■□□□□ 0.19
PRP40P33203 ARE1YCR048W 1833 nt16.18■□□□□ 0.18
PRP40P33203 LSM3YLR438C-A 270 nt16.18■□□□□ 0.18
PRP40P33203 FMP45YDL222C 930 nt16.14■□□□□ 0.17
PRP40P33203 PTC2YER089C 1395 nt16.09■□□□□ 0.17
PRP40P33203 DSK2YMR276W 1122 nt16.06■□□□□ 0.16
PRP40P33203 YCH1YGR203W 447 nt16.03■□□□□ 0.16
PRP40P33203 YHR049C-AYHR049C-A 297 nt16.01■□□□□ 0.15
PRP40P33203 IMP2'YIL154C 1041 nt16■□□□□ 0.15
PRP40P33203 YPR011CYPR011C 981 nt15.97■□□□□ 0.15
PRP40P33203 ADO1YJR105W 1023 nt15.96■□□□□ 0.15
PRP40P33203 YLR236CYLR236C 324 nt15.93■□□□□ 0.14
PRP40P33203 INM2YDR287W 879 nt15.91■□□□□ 0.14
PRP40P33203 YBL100CYBL100C 315 nt15.86■□□□□ 0.13
PRP40P33203 UBX6YJL048C 1191 nt15.84■□□□□ 0.13
PRP40P33203 TRM9YML014W 840 nt15.82■□□□□ 0.12
PRP40P33203 POA1YBR022W 534 nt15.81■□□□□ 0.12
PRP40P33203 YEL076C-AYEL076C-A 651 nt15.8■□□□□ 0.12
PRP40P33203 YEL076CYEL076C 651 nt15.8■□□□□ 0.12
PRP40P33203 YLR464WYLR464W 651 nt15.8■□□□□ 0.12
PRP40P33203 NAB2YGL122C 1578 nt15.79■□□□□ 0.12
PRP40P33203 YLR154C-GYLR154C-G 150 nt15.78■□□□□ 0.12
PRP40P33203 DAL1YIR027C 1383 nt15.74■□□□□ 0.11
Retrieved 100 of 7,029 protein–RNA pairs in 7.3 ms