RNA–Protein interactions for RNA: YLR175W

CBF5, Transcript of Pseudouridine synthase catalytic subunit of box H/ACA snoRNPs, yeastyeast

Gene CBF5, Length 1,452 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CBF5YLR175W DRS1P32892 752 aaKnown RBP9.48□□□□□ -0.89
CBF5YLR175W MTC1P47018 478 aaKnown RBP9.19□□□□□ -0.94
CBF5YLR175W SGS1P35187 1447 aa8.47□□□□□ -1.05
CBF5YLR175W INO80P53115 1489 aa8.41□□□□□ -1.06
CBF5YLR175W MON2P48563 1636 aaPredicted RBP8.39□□□□□ -1.07
CBF5YLR175W TCB3Q03640 1545 aaKnown RBP8.35□□□□□ -1.07
CBF5YLR175W FAP1P53971 965 aa8.33□□□□□ -1.08
CBF5YLR175W BFR2Q06631 534 aaKnown RBP8.32□□□□□ -1.08
CBF5YLR175W TY1B-DR4Q07793 1604 aa8.26□□□□□ -1.09
CBF5YLR175W SWR1Q05471 1514 aa8.14□□□□□ -1.11
CBF5YLR175W HSL1P34244 1518 aa8.05□□□□□ -1.12
CBF5YLR175W SPT6P23615 1451 aaKnown RBP8.02□□□□□ -1.12
CBF5YLR175W TFA1P36100 482 aa8.02□□□□□ -1.13
CBF5YLR175W DIP2Q12220 943 aaPredicted RBP8.01□□□□□ -1.13
CBF5YLR175W SPA2P23201 1466 aaKnown RBP8.01□□□□□ -1.13
CBF5YLR175W SSN2P38931 1420 aa8□□□□□ -1.13
CBF5YLR175W AVT3P36062 692 aa7.97□□□□□ -1.13
CBF5YLR175W PRY3P47033 881 aa7.96□□□□□ -1.13
CBF5YLR175W DNA2P38859 1522 aa7.96□□□□□ -1.14
CBF5YLR175W KOG1P38873 1557 aa7.93□□□□□ -1.14
CBF5YLR175W HIR3P47171 1648 aa7.89□□□□□ -1.15
CBF5YLR175W XRN1P22147 1528 aaKnown RBP7.8□□□□□ -1.16
CBF5YLR175W THO2P53552 1597 aaKnown RBP7.71□□□□□ -1.17
CBF5YLR175W BUD4P47136 1447 aa7.7□□□□□ -1.18
CBF5YLR175W REV3P14284 1504 aa7.69□□□□□ -1.18
CBF5YLR175W ECM5Q03214 1411 aa7.68□□□□□ -1.18
CBF5YLR175W SIN3P22579 1536 aa7.66□□□□□ -1.18
CBF5YLR175W SSK2P53599 1579 aa7.59□□□□□ -1.2
CBF5YLR175W YCK3P39962 524 aa7.58□□□□□ -1.2
CBF5YLR175W ATG2P53855 1592 aa7.57□□□□□ -1.2
CBF5YLR175W PEP1P32319 1579 aa7.56□□□□□ -1.2
CBF5YLR175W MDS3P53094 1487 aa7.56□□□□□ -1.2
CBF5YLR175W TAF2P23255 1407 aa7.53□□□□□ -1.2
CBF5YLR175W ESP1Q03018 1630 aa7.51□□□□□ -1.21
CBF5YLR175W RSE1Q04693 1361 aaKnown RBP7.49□□□□□ -1.21
CBF5YLR175W MYO2P19524 1574 aaKnown RBP7.48□□□□□ -1.21
CBF5YLR175W SKI3P17883 1432 aaKnown RBP7.47□□□□□ -1.21
CBF5YLR175W ISW2Q08773 1120 aa7.44□□□□□ -1.22
CBF5YLR175W YPK9Q12697 1472 aa7.44□□□□□ -1.22
CBF5YLR175W SCC2Q04002 1493 aa7.37□□□□□ -1.23
CBF5YLR175W HAA1Q12753 694 aaKnown RBP7.36□□□□□ -1.23
CBF5YLR175W RPO31P04051 1460 aa7.35□□□□□ -1.23
CBF5YLR175W POL1P13382 1468 aa7.34□□□□□ -1.23
CBF5YLR175W RPG1P38249 964 aaKnown RBP7.33□□□□□ -1.24
CBF5YLR175W UFD4P33202 1483 aa7.33□□□□□ -1.24
CBF5YLR175W BPT1P14772 1559 aa7.33□□□□□ -1.24
CBF5YLR175W TOP2P06786 1428 aaKnown RBP7.29□□□□□ -1.24
CBF5YLR175W YCF1P39109 1515 aaKnown RBP7.28□□□□□ -1.24
CBF5YLR175W RKR1Q04781 1562 aa7.26□□□□□ -1.25
CBF5YLR175W STU1P38198 1513 aa7.26□□□□□ -1.25
CBF5YLR175W PRI1P10363 409 aa7.25□□□□□ -1.25
CBF5YLR175W TY2B-LR1P0C2J3 1770 aa7.25□□□□□ -1.25
CBF5YLR175W TY2B-FP0CX63 1770 aa7.25□□□□□ -1.25
CBF5YLR175W TY2B-GR2P0CX64 1770 aa7.25□□□□□ -1.25
CBF5YLR175W TY2B-CP25384 1770 aa7.25□□□□□ -1.25
CBF5YLR175W TY2B-DR2Q03494 1770 aa7.25□□□□□ -1.25
CBF5YLR175W TY1B-DR1Q03855 1755 aa7.25□□□□□ -1.25
CBF5YLR175W TY2B-DR3Q07791 1770 aaKnown RBP7.25□□□□□ -1.25
CBF5YLR175W TY2B-OR1Q12113 1770 aa7.25□□□□□ -1.25
CBF5YLR175W TY2B-DR1Q12472 1770 aa7.25□□□□□ -1.25
CBF5YLR175W TY2B-OR2Q12501 1770 aa7.25□□□□□ -1.25
CBF5YLR175W YOR1P53049 1477 aa7.24□□□□□ -1.25
CBF5YLR175W SMC4Q12267 1418 aa7.22□□□□□ -1.25
CBF5YLR175W YTA7P40340 1379 aa7.21□□□□□ -1.25
CBF5YLR175W CHD1P32657 1468 aa7.18□□□□□ -1.26
CBF5YLR175W TY1B-DR3Q99231 1755 aa7.18□□□□□ -1.26
CBF5YLR175W RPL17AP05740 184 aaKnown RBP7.17□□□□□ -1.26
CBF5YLR175W RPL17BP46990 184 aaKnown RBP7.17□□□□□ -1.26
CBF5YLR175W TY2B-BQ12491 1770 aa7.17□□□□□ -1.26
CBF5YLR175W MYO4P32492 1471 aa7.17□□□□□ -1.26
CBF5YLR175W CDC25P04821 1589 aa7.17□□□□□ -1.26
CBF5YLR175W TY1B-BRQ12193 1756 aa7.17□□□□□ -1.26
CBF5YLR175W TY1B-GR3Q12316 1755 aa7.17□□□□□ -1.26
CBF5YLR175W TY1B-ORQ92393 1755 aa7.17□□□□□ -1.26
CBF5YLR175W TY1B-HO13535 1793 aa7.15□□□□□ -1.27
CBF5YLR175W TY1B-DR5P0C2I2 1755 aa7.15□□□□□ -1.27
CBF5YLR175W TY1B-DR6P0C2I3 1755 aa7.15□□□□□ -1.27
CBF5YLR175W TY1B-LR2P0C2I5 1755 aa7.15□□□□□ -1.27
CBF5YLR175W TY1B-LR3P0C2I6 1755 aaKnown RBP7.15□□□□□ -1.27
CBF5YLR175W TY1B-PR1P0C2I9 1755 aaKnown RBP7.15□□□□□ -1.27
CBF5YLR175W TY1B-PR2P0C2J0 1756 aa7.15□□□□□ -1.27
CBF5YLR175W TY1B-PR3P0C2J1 1755 aaKnown RBP7.15□□□□□ -1.27
CBF5YLR175W TY1B-JR1P47098 1755 aa7.15□□□□□ -1.27
CBF5YLR175W TY1B-ML2Q03434 1755 aaKnown RBP7.15□□□□□ -1.27
CBF5YLR175W TY1B-ER1Q03612 1755 aa7.15□□□□□ -1.27
CBF5YLR175W TY1B-ML1Q04711 1755 aaKnown RBP7.15□□□□□ -1.27
CBF5YLR175W TY1B-GR2Q12269 1755 aa7.15□□□□□ -1.27
CBF5YLR175W TY1B-OLQ12273 1755 aa7.15□□□□□ -1.27
CBF5YLR175W TY1B-PLQ12414 1755 aaKnown RBP7.15□□□□□ -1.27
CBF5YLR175W PAN1P32521 1480 aa7.14□□□□□ -1.27
CBF5YLR175W MMS22Q06164 1454 aa7.13□□□□□ -1.27
CBF5YLR175W SPP41P38904 1435 aa7.11□□□□□ -1.27
CBF5YLR175W AAD16Q02895 342 aa7.1□□□□□ -1.27
CBF5YLR175W RQC2Q12532 1038 aaKnown RBP7.09□□□□□ -1.27
CBF5YLR175W DNF1P32660 1571 aa7.07□□□□□ -1.28
CBF5YLR175W REB1P21538 810 aa7.07□□□□□ -1.28
CBF5YLR175W TSC11P40061 1430 aa7.06□□□□□ -1.28
CBF5YLR175W ESC1Q03661 1658 aaKnown RBP7.06□□□□□ -1.28
CBF5YLR175W RPA190P10964 1664 aaKnown RBP7.05□□□□□ -1.28
CBF5YLR175W VTH1P40438 1549 aa7.05□□□□□ -1.28
Retrieved 100 of 5,963 RNA–protein pairs in 11.3 ms