RNA–Protein interactions for RNA: YKL185W

ASH1, Transcript of Component of the Rpd3L histone deacetylase complex, yeastyeast

Gene ASH1, Length 1,767 nt, Biotype protein coding, Subcellular localisation Cell cortex, Cellular bud, Cytoplasm, Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ASH1YKL185W MTC1P47018 478 aaKnown RBP11.13□□□□□ -0.63
ASH1YKL185W DRS1P32892 752 aaKnown RBP10.97□□□□□ -0.65
ASH1YKL185W FAP1P53971 965 aa9.44□□□□□ -0.9
ASH1YKL185W DIP2Q12220 943 aaPredicted RBP9.41□□□□□ -0.9
ASH1YKL185W SGS1P35187 1447 aa9.39□□□□□ -0.91
ASH1YKL185W BFR2Q06631 534 aaKnown RBP9.37□□□□□ -0.91
ASH1YKL185W AVT3P36062 692 aa9.21□□□□□ -0.94
ASH1YKL185W INO80P53115 1489 aa9.2□□□□□ -0.94
ASH1YKL185W SPA2P23201 1466 aaKnown RBP9.16□□□□□ -0.94
ASH1YKL185W ISW2Q08773 1120 aa9.1□□□□□ -0.95
ASH1YKL185W SSN2P38931 1420 aa9.07□□□□□ -0.96
ASH1YKL185W PRI1P10363 409 aa9.07□□□□□ -0.96
ASH1YKL185W TCB3Q03640 1545 aaKnown RBP9.03□□□□□ -0.96
ASH1YKL185W RPG1P38249 964 aaKnown RBP9.01□□□□□ -0.97
ASH1YKL185W TY1B-DR4Q07793 1604 aa8.96□□□□□ -0.98
ASH1YKL185W AAD16Q02895 342 aa8.95□□□□□ -0.98
ASH1YKL185W RSE1Q04693 1361 aaKnown RBP8.93□□□□□ -0.98
ASH1YKL185W PRY3P47033 881 aa8.85□□□□□ -0.99
ASH1YKL185W HSL1P34244 1518 aa8.8□□□□□ -1
ASH1YKL185W MON2P48563 1636 aaPredicted RBP8.76□□□□□ -1.01
ASH1YKL185W SPT6P23615 1451 aaKnown RBP8.75□□□□□ -1.01
ASH1YKL185W SWR1Q05471 1514 aa8.65□□□□□ -1.03
ASH1YKL185W HIR3P47171 1648 aa8.65□□□□□ -1.03
ASH1YKL185W TSR3Q12094 313 aaKnown RBP8.64□□□□□ -1.03
ASH1YKL185W RPL17AP05740 184 aaKnown RBP8.63□□□□□ -1.03
ASH1YKL185W TFA1P36100 482 aa8.63□□□□□ -1.03
ASH1YKL185W RPL17BP46990 184 aaKnown RBP8.63□□□□□ -1.03
ASH1YKL185W XRN1P22147 1528 aaKnown RBP8.59□□□□□ -1.03
ASH1YKL185W REB1P21538 810 aa8.54□□□□□ -1.04
ASH1YKL185W REV3P14284 1504 aa8.51□□□□□ -1.05
ASH1YKL185W THO2P53552 1597 aaKnown RBP8.49□□□□□ -1.05
ASH1YKL185W SIN3P22579 1536 aa8.47□□□□□ -1.05
ASH1YKL185W SSK2P53599 1579 aa8.44□□□□□ -1.06
ASH1YKL185W ESP1Q03018 1630 aa8.37□□□□□ -1.07
ASH1YKL185W YCK3P39962 524 aa8.35□□□□□ -1.07
ASH1YKL185W TAF2P23255 1407 aa8.34□□□□□ -1.07
ASH1YKL185W MYO2P19524 1574 aaKnown RBP8.34□□□□□ -1.07
ASH1YKL185W KOG1P38873 1557 aa8.32□□□□□ -1.08
ASH1YKL185W DNA2P38859 1522 aa8.3□□□□□ -1.08
ASH1YKL185W HAA1Q12753 694 aaKnown RBP8.29□□□□□ -1.08
ASH1YKL185W SPT21P35209 758 aa8.27□□□□□ -1.08
ASH1YKL185W ATG2P53855 1592 aa8.27□□□□□ -1.08
ASH1YKL185W MRPL32P25348 183 aa8.27□□□□□ -1.09
ASH1YKL185W SKI3P17883 1432 aaKnown RBP8.27□□□□□ -1.09
ASH1YKL185W BUD4P47136 1447 aa8.26□□□□□ -1.09
ASH1YKL185W CHD1P32657 1468 aa8.25□□□□□ -1.09
ASH1YKL185W MMS22Q06164 1454 aa8.23□□□□□ -1.09
ASH1YKL185W POL1P13382 1468 aa8.2□□□□□ -1.1
ASH1YKL185W YPK9Q12697 1472 aa8.18□□□□□ -1.1
ASH1YKL185W ECM5Q03214 1411 aa8.18□□□□□ -1.1
ASH1YKL185W STU1P38198 1513 aa8.17□□□□□ -1.1
ASH1YKL185W PEP1P32319 1579 aa8.15□□□□□ -1.1
ASH1YKL185W MDS3P53094 1487 aa8.12□□□□□ -1.11
ASH1YKL185W BPT1P14772 1559 aa8.11□□□□□ -1.11
ASH1YKL185W RKR1Q04781 1562 aa8.11□□□□□ -1.11
ASH1YKL185W SCC2Q04002 1493 aa8.11□□□□□ -1.11
ASH1YKL185W RIM101P33400 625 aa8.1□□□□□ -1.11
ASH1YKL185W YTA7P40340 1379 aa8.08□□□□□ -1.12
ASH1YKL185W YKR023WP36119 530 aaKnown RBP8.07□□□□□ -1.12
ASH1YKL185W YOR1P53049 1477 aa8.07□□□□□ -1.12
ASH1YKL185W RPO31P04051 1460 aa8.05□□□□□ -1.12
ASH1YKL185W TY2B-LR1P0C2J3 1770 aa8.04□□□□□ -1.12
ASH1YKL185W TY2B-FP0CX63 1770 aa8.04□□□□□ -1.12
ASH1YKL185W TY2B-GR2P0CX64 1770 aa8.04□□□□□ -1.12
ASH1YKL185W TY2B-CP25384 1770 aa8.04□□□□□ -1.12
ASH1YKL185W TY2B-DR2Q03494 1770 aa8.04□□□□□ -1.12
ASH1YKL185W TY1B-DR1Q03855 1755 aa8.04□□□□□ -1.12
ASH1YKL185W TY2B-DR3Q07791 1770 aaKnown RBP8.04□□□□□ -1.12
ASH1YKL185W TY2B-OR1Q12113 1770 aa8.04□□□□□ -1.12
ASH1YKL185W TY2B-DR1Q12472 1770 aa8.04□□□□□ -1.12
ASH1YKL185W TY2B-OR2Q12501 1770 aa8.04□□□□□ -1.12
ASH1YKL185W MYO4P32492 1471 aa8.03□□□□□ -1.12
ASH1YKL185W TY1B-DR3Q99231 1755 aa8.02□□□□□ -1.13
ASH1YKL185W YCF1P39109 1515 aaKnown RBP8.01□□□□□ -1.13
ASH1YKL185W TOP2P06786 1428 aaKnown RBP8□□□□□ -1.13
ASH1YKL185W UFD4P33202 1483 aa7.98□□□□□ -1.13
ASH1YKL185W SMC4Q12267 1418 aa7.98□□□□□ -1.13
ASH1YKL185W CDC27P38042 758 aa7.97□□□□□ -1.13
ASH1YKL185W TY2B-BQ12491 1770 aa7.97□□□□□ -1.13
ASH1YKL185W SAS10Q12136 610 aaPredicted RBP7.97□□□□□ -1.13
ASH1YKL185W MLP2P40457 1679 aa7.94□□□□□ -1.14
ASH1YKL185W HOP09932 586 aa7.94□□□□□ -1.14
ASH1YKL185W SNQ2P32568 1501 aaKnown RBP7.93□□□□□ -1.14
ASH1YKL185W TRM732Q03496 1420 aa7.92□□□□□ -1.14
ASH1YKL185W NOP2P40991 618 aaKnown RBP7.92□□□□□ -1.14
ASH1YKL185W TY1B-HO13535 1793 aa7.9□□□□□ -1.14
ASH1YKL185W TY1B-DR5P0C2I2 1755 aa7.9□□□□□ -1.14
ASH1YKL185W TY1B-DR6P0C2I3 1755 aa7.9□□□□□ -1.14
ASH1YKL185W TY1B-LR2P0C2I5 1755 aa7.9□□□□□ -1.14
ASH1YKL185W TY1B-LR3P0C2I6 1755 aaKnown RBP7.9□□□□□ -1.14
ASH1YKL185W TY1B-PR1P0C2I9 1755 aaKnown RBP7.9□□□□□ -1.14
ASH1YKL185W TY1B-PR2P0C2J0 1756 aa7.9□□□□□ -1.14
ASH1YKL185W TY1B-PR3P0C2J1 1755 aaKnown RBP7.9□□□□□ -1.14
ASH1YKL185W TY1B-JR1P47098 1755 aa7.9□□□□□ -1.14
ASH1YKL185W TY1B-ML2Q03434 1755 aaKnown RBP7.9□□□□□ -1.14
ASH1YKL185W TY1B-ER1Q03612 1755 aa7.9□□□□□ -1.14
ASH1YKL185W TY1B-ML1Q04711 1755 aaKnown RBP7.9□□□□□ -1.14
ASH1YKL185W TY1B-GR2Q12269 1755 aa7.9□□□□□ -1.14
ASH1YKL185W TY1B-OLQ12273 1755 aa7.9□□□□□ -1.14
ASH1YKL185W TY1B-PLQ12414 1755 aaKnown RBP7.9□□□□□ -1.14
Retrieved 100 of 5,963 RNA–protein pairs in 11.7 ms