RNA–Protein interactions for RNA: YKL185W
Retrieved 3 of 3 RNA–protein pairs in 2 ms
ASH1, Transcript of Component of the Rpd3L histone deacetylase complex, yeast
Gene ASH1, Length 1,767 nt, Biotype protein coding, Subcellular localisation Cell cortex, Cellular bud, Cytoplasm, Endoplasmic reticulum, Ribosome .
RNA | Protein | Prediction (catRAPID) | Interaction (RIP-Chip) | |||||
---|---|---|---|---|---|---|---|---|
Gene | Ensembl Transcript ID | Gene | UniProt Accession | Length | Protein Status | Prediction Score | Prediction z-Score | Detected Interaction |
ASH1 | YKL185W | HEK2 | P38199 | 381 aa | Known RBP RIP-Chip data | 5.96 | □□□□□ -1.46 | RIP-Chip |
ASH1 | YKL185W | SHE2 | P36068 | 246 aa | Known RBP RIP-Chip data | 5.19 | □□□□□ -1.58 | RIP-Chip |
ASH1 | YKL185W | VTS1 | Q08831 | 523 aa | Known RBP RIP-Chip data | 4.63 | □□□□□ -1.67 | RIP-Chip |