RNA–Protein interactions for RNA: YKL053C-A

MDM35, Transcript of Mitochondrial intermembrane space protein, yeastyeast

Gene MDM35, Length 261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MDM35YKL053C-A SGS1P35187 1447 aa14.09□□□□□ -0.15
MDM35YKL053C-A SPA2P23201 1466 aaKnown RBP13.92□□□□□ -0.18
MDM35YKL053C-A SSN2P38931 1420 aa13.73□□□□□ -0.21
MDM35YKL053C-A INO80P53115 1489 aa13.67□□□□□ -0.22
MDM35YKL053C-A DRS1P32892 752 aaKnown RBP13.37□□□□□ -0.27
MDM35YKL053C-A TCB3Q03640 1545 aaKnown RBP13.29□□□□□ -0.28
MDM35YKL053C-A TY1B-DR4Q07793 1604 aa13.08□□□□□ -0.32
MDM35YKL053C-A HSL1P34244 1518 aa12.94□□□□□ -0.34
MDM35YKL053C-A SKI3P17883 1432 aaKnown RBP12.93□□□□□ -0.34
MDM35YKL053C-A SPT6P23615 1451 aaKnown RBP12.9□□□□□ -0.34
MDM35YKL053C-A HIR3P47171 1648 aa12.77□□□□□ -0.37
MDM35YKL053C-A XRN1P22147 1528 aaKnown RBP12.76□□□□□ -0.37
MDM35YKL053C-A THO2P53552 1597 aaKnown RBP12.64□□□□□ -0.39
MDM35YKL053C-A CHD1P32657 1468 aa12.63□□□□□ -0.39
MDM35YKL053C-A REV3P14284 1504 aa12.62□□□□□ -0.39
MDM35YKL053C-A MMS22Q06164 1454 aa12.6□□□□□ -0.39
MDM35YKL053C-A SIN3P22579 1536 aa12.57□□□□□ -0.4
MDM35YKL053C-A SSK2P53599 1579 aa12.53□□□□□ -0.4
MDM35YKL053C-A SWR1Q05471 1514 aa12.52□□□□□ -0.4
MDM35YKL053C-A MON2P48563 1636 aaPredicted RBP12.51□□□□□ -0.41
MDM35YKL053C-A TAF2P23255 1407 aa12.45□□□□□ -0.42
MDM35YKL053C-A MYO2P19524 1574 aaKnown RBP12.45□□□□□ -0.42
MDM35YKL053C-A ESP1Q03018 1630 aa12.44□□□□□ -0.42
MDM35YKL053C-A STU1P38198 1513 aa12.34□□□□□ -0.43
MDM35YKL053C-A POL1P13382 1468 aa12.3□□□□□ -0.44
MDM35YKL053C-A YTA7P40340 1379 aa12.29□□□□□ -0.44
MDM35YKL053C-A UFD4P33202 1483 aa12.26□□□□□ -0.45
MDM35YKL053C-A SAS10Q12136 610 aaPredicted RBP12.25□□□□□ -0.45
MDM35YKL053C-A RSE1Q04693 1361 aaKnown RBP12.19□□□□□ -0.46
MDM35YKL053C-A BPT1P14772 1559 aa12.18□□□□□ -0.46
MDM35YKL053C-A TRM732Q03496 1420 aa12.17□□□□□ -0.46
MDM35YKL053C-A YPK9Q12697 1472 aa12.15□□□□□ -0.46
MDM35YKL053C-A BUD4P47136 1447 aa12.15□□□□□ -0.46
MDM35YKL053C-A ATG2P53855 1592 aa12.13□□□□□ -0.47
MDM35YKL053C-A RKR1Q04781 1562 aa12.13□□□□□ -0.47
MDM35YKL053C-A IKI3Q06706 1349 aaKnown RBP12.11□□□□□ -0.47
MDM35YKL053C-A NOP2P40991 618 aaKnown RBP12.1□□□□□ -0.47
MDM35YKL053C-A ECM5Q03214 1411 aa12.1□□□□□ -0.47
MDM35YKL053C-A MYO4P32492 1471 aa12.08□□□□□ -0.47
MDM35YKL053C-A SCC2Q04002 1493 aa12.08□□□□□ -0.47
MDM35YKL053C-A DNA2P38859 1522 aa12.08□□□□□ -0.48
MDM35YKL053C-A YOR1P53049 1477 aa12.08□□□□□ -0.48
MDM35YKL053C-A NSR1P27476 414 aaKnown RBP RIP-Chip data12.07□□□□□ -0.48 RIP-Chip
MDM35YKL053C-A TAF7Q05021 590 aa12.03□□□□□ -0.48
MDM35YKL053C-A SPP41P38904 1435 aa12.03□□□□□ -0.48
MDM35YKL053C-A KOG1P38873 1557 aa11.99□□□□□ -0.49
MDM35YKL053C-A SMC4Q12267 1418 aa11.95□□□□□ -0.5
MDM35YKL053C-A MLP2P40457 1679 aa11.95□□□□□ -0.5
MDM35YKL053C-A SNQ2P32568 1501 aaKnown RBP11.95□□□□□ -0.5
MDM35YKL053C-A NUP170P38181 1502 aa11.94□□□□□ -0.5
MDM35YKL053C-A RPO31P04051 1460 aa11.93□□□□□ -0.5
MDM35YKL053C-A STH1P32597 1359 aa11.92□□□□□ -0.5
MDM35YKL053C-A TOP2P06786 1428 aaKnown RBP11.92□□□□□ -0.5
MDM35YKL053C-A SSM4P40318 1319 aa11.9□□□□□ -0.5
MDM35YKL053C-A PEP1P32319 1579 aa11.89□□□□□ -0.51
MDM35YKL053C-A TY1B-DR3Q99231 1755 aa11.87□□□□□ -0.51
MDM35YKL053C-A TY2B-LR1P0C2J3 1770 aa11.86□□□□□ -0.51
MDM35YKL053C-A TY2B-FP0CX63 1770 aa11.86□□□□□ -0.51
MDM35YKL053C-A TY2B-GR2P0CX64 1770 aa11.86□□□□□ -0.51
MDM35YKL053C-A TY2B-CP25384 1770 aa11.86□□□□□ -0.51
MDM35YKL053C-A TY2B-DR2Q03494 1770 aa11.86□□□□□ -0.51
MDM35YKL053C-A TY1B-DR1Q03855 1755 aa11.86□□□□□ -0.51
MDM35YKL053C-A TY2B-DR3Q07791 1770 aaKnown RBP11.86□□□□□ -0.51
MDM35YKL053C-A TY2B-OR1Q12113 1770 aa11.86□□□□□ -0.51
MDM35YKL053C-A TY2B-DR1Q12472 1770 aa11.86□□□□□ -0.51
MDM35YKL053C-A TY2B-OR2Q12501 1770 aa11.86□□□□□ -0.51
MDM35YKL053C-A YCF1P39109 1515 aaKnown RBP11.85□□□□□ -0.51
MDM35YKL053C-A MDS3P53094 1487 aa11.83□□□□□ -0.52
MDM35YKL053C-A IFH1P39520 1085 aa11.83□□□□□ -0.52
MDM35YKL053C-A PDR15Q04182 1529 aaKnown RBP11.82□□□□□ -0.52
MDM35YKL053C-A POL5P39985 1022 aaKnown RBP11.81□□□□□ -0.52
MDM35YKL053C-A PAN1P32521 1480 aa11.81□□□□□ -0.52
MDM35YKL053C-A GEA1P47102 1408 aaPredicted RBP11.8□□□□□ -0.52
MDM35YKL053C-A TY2B-BQ12491 1770 aa11.78□□□□□ -0.52
MDM35YKL053C-A ENP1P38333 483 aaKnown RBP11.77□□□□□ -0.53
MDM35YKL053C-A ULS1Q08562 1619 aa11.75□□□□□ -0.53
MDM35YKL053C-A TSC11P40061 1430 aa11.74□□□□□ -0.53
MDM35YKL053C-A RTT106P40161 455 aa11.68□□□□□ -0.54
MDM35YKL053C-A TY1B-HO13535 1793 aa11.66□□□□□ -0.54
MDM35YKL053C-A TY1B-DR5P0C2I2 1755 aa11.66□□□□□ -0.54
MDM35YKL053C-A TY1B-DR6P0C2I3 1755 aa11.66□□□□□ -0.54
MDM35YKL053C-A TY1B-LR2P0C2I5 1755 aa11.66□□□□□ -0.54
MDM35YKL053C-A TY1B-LR3P0C2I6 1755 aaKnown RBP11.66□□□□□ -0.54
MDM35YKL053C-A TY1B-PR1P0C2I9 1755 aaKnown RBP11.66□□□□□ -0.54
MDM35YKL053C-A TY1B-PR2P0C2J0 1756 aa11.66□□□□□ -0.54
MDM35YKL053C-A TY1B-PR3P0C2J1 1755 aaKnown RBP11.66□□□□□ -0.54
MDM35YKL053C-A TY1B-JR1P47098 1755 aa11.66□□□□□ -0.54
MDM35YKL053C-A TY1B-ML2Q03434 1755 aaKnown RBP11.66□□□□□ -0.54
MDM35YKL053C-A TY1B-ER1Q03612 1755 aa11.66□□□□□ -0.54
MDM35YKL053C-A TY1B-ML1Q04711 1755 aaKnown RBP11.66□□□□□ -0.54
MDM35YKL053C-A TY1B-GR2Q12269 1755 aa11.66□□□□□ -0.54
MDM35YKL053C-A TY1B-OLQ12273 1755 aa11.66□□□□□ -0.54
MDM35YKL053C-A TY1B-PLQ12414 1755 aaKnown RBP11.66□□□□□ -0.54
MDM35YKL053C-A SEC3P33332 1336 aaKnown RBP11.63□□□□□ -0.55
MDM35YKL053C-A TY1B-BRQ12193 1756 aa11.61□□□□□ -0.55
MDM35YKL053C-A TY1B-GR3Q12316 1755 aa11.61□□□□□ -0.55
MDM35YKL053C-A TY1B-ORQ92393 1755 aa11.61□□□□□ -0.55
MDM35YKL053C-A TY3B-GQ99315 1547 aa11.6□□□□□ -0.55
MDM35YKL053C-A SPT7P35177 1332 aa11.59□□□□□ -0.55
MDM35YKL053C-A VTH1P40438 1549 aa11.57□□□□□ -0.56
Retrieved 100 of 5,963 RNA–protein pairs in 14.6 ms