RNA–Protein interactions for RNA: YIR001C

SGN1, Transcript of Cytoplasmic RNA-binding protein, yeastyeast

Gene SGN1, Length 753 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SGN1YIR001C FAP1P53971 965 aa11□□□□□ -0.65
SGN1YIR001C PRY3P47033 881 aa10.41□□□□□ -0.74
SGN1YIR001C MTC1P47018 478 aaKnown RBP9.99□□□□□ -0.81
SGN1YIR001C YCK3P39962 524 aa9.78□□□□□ -0.84
SGN1YIR001C HAA1Q12753 694 aaKnown RBP9.68□□□□□ -0.86
SGN1YIR001C AAD16Q02895 342 aa9.59□□□□□ -0.87
SGN1YIR001C PRI1P10363 409 aa9.43□□□□□ -0.9
SGN1YIR001C DRS1P32892 752 aaKnown RBP9.11□□□□□ -0.95
SGN1YIR001C TSR3Q12094 313 aaKnown RBP8.81□□□□□ -1
SGN1YIR001C BUD31P25337 157 aaPredicted RBP8.7□□□□□ -1.02
SGN1YIR001C ISW2Q08773 1120 aa8.67□□□□□ -1.02
SGN1YIR001C YGL015CP33199 130 aa8.63□□□□□ -1.03
SGN1YIR001C RPG1P38249 964 aaKnown RBP8.63□□□□□ -1.03
SGN1YIR001C MRPL32P25348 183 aa8.47□□□□□ -1.05
SGN1YIR001C SIS1P25294 352 aaKnown RBP8.11□□□□□ -1.11
SGN1YIR001C INO80P53115 1489 aa8.02□□□□□ -1.13
SGN1YIR001C MON2P48563 1636 aaPredicted RBP7.98□□□□□ -1.13
SGN1YIR001C DIP2Q12220 943 aaPredicted RBP7.89□□□□□ -1.15
SGN1YIR001C UBP9P39967 754 aa7.76□□□□□ -1.17
SGN1YIR001C UBP10P53874 792 aaPredicted RBP7.76□□□□□ -1.17
SGN1YIR001C CDC27P38042 758 aa7.73□□□□□ -1.17
SGN1YIR001C BFR2Q06631 534 aaKnown RBP7.73□□□□□ -1.17
SGN1YIR001C AVT3P36062 692 aa7.69□□□□□ -1.18
SGN1YIR001C MAP2P38174 421 aaKnown RBP7.69□□□□□ -1.18
SGN1YIR001C DNA2P38859 1522 aa7.62□□□□□ -1.19
SGN1YIR001C RSE1Q04693 1361 aaKnown RBP7.59□□□□□ -1.2
SGN1YIR001C SWR1Q05471 1514 aa7.56□□□□□ -1.2
SGN1YIR001C KOG1P38873 1557 aa7.52□□□□□ -1.21
SGN1YIR001C REB1P21538 810 aa7.52□□□□□ -1.21
SGN1YIR001C TCB3Q03640 1545 aaKnown RBP7.47□□□□□ -1.21
SGN1YIR001C TY1B-DR4Q07793 1604 aa7.46□□□□□ -1.21
SGN1YIR001C TIF4632P39936 914 aaKnown RBP7.45□□□□□ -1.22
SGN1YIR001C TGL3P40308 642 aa7.45□□□□□ -1.22
SGN1YIR001C RPL17AP05740 184 aaKnown RBP7.38□□□□□ -1.23
SGN1YIR001C RPL17BP46990 184 aaKnown RBP7.38□□□□□ -1.23
SGN1YIR001C SGS1P35187 1447 aa7.28□□□□□ -1.24
SGN1YIR001C YKR023WP36119 530 aaKnown RBP7.28□□□□□ -1.24
SGN1YIR001C SLX5P32828 619 aaKnown RBP7.23□□□□□ -1.25
SGN1YIR001C SCY1P53009 804 aa7.21□□□□□ -1.26
SGN1YIR001C SPT6P23615 1451 aaKnown RBP7.17□□□□□ -1.26
SGN1YIR001C HSL1P34244 1518 aa7.16□□□□□ -1.26
SGN1YIR001C DCD1P06773 312 aa7.14□□□□□ -1.27
SGN1YIR001C SPA2P23201 1466 aaKnown RBP7.14□□□□□ -1.27
SGN1YIR001C TFC8Q12308 588 aa7.13□□□□□ -1.27
SGN1YIR001C HOP09932 586 aa7.12□□□□□ -1.27
SGN1YIR001C YBL029C-AQ3E756 94 aa7.09□□□□□ -1.27
SGN1YIR001C ECM5Q03214 1411 aa7.09□□□□□ -1.28
SGN1YIR001C TFA1P36100 482 aa7.05□□□□□ -1.28
SGN1YIR001C HIR3P47171 1648 aa7.01□□□□□ -1.29
SGN1YIR001C THO2P53552 1597 aaKnown RBP7□□□□□ -1.29
SGN1YIR001C SPT21P35209 758 aa6.99□□□□□ -1.29
SGN1YIR001C BUD4P47136 1447 aa6.99□□□□□ -1.29
SGN1YIR001C YJL171CP46992 396 aa6.97□□□□□ -1.29
SGN1YIR001C MST1P07236 462 aa6.94□□□□□ -1.3
SGN1YIR001C VNX1P42839 908 aa6.94□□□□□ -1.3
SGN1YIR001C AIR2Q12476 344 aaKnown RBP6.94□□□□□ -1.3
SGN1YIR001C MDS3P53094 1487 aa6.92□□□□□ -1.3
SGN1YIR001C XRN1P22147 1528 aaKnown RBP6.88□□□□□ -1.31
SGN1YIR001C SPP1Q03012 353 aa6.87□□□□□ -1.31
SGN1YIR001C FKH1P40466 484 aa6.84□□□□□ -1.31
SGN1YIR001C REV3P14284 1504 aa6.84□□□□□ -1.31
SGN1YIR001C PEP1P32319 1579 aa6.83□□□□□ -1.32
SGN1YIR001C RIM101P33400 625 aa6.83□□□□□ -1.32
SGN1YIR001C BCH2P36122 765 aa6.83□□□□□ -1.32
SGN1YIR001C BPT1P14772 1559 aa6.82□□□□□ -1.32
SGN1YIR001C YOR238WQ08634 303 aa6.8□□□□□ -1.32
SGN1YIR001C ATG2P53855 1592 aa6.79□□□□□ -1.32
SGN1YIR001C RGA2Q06407 1009 aa6.72□□□□□ -1.33
SGN1YIR001C BMT6Q12291 365 aa6.72□□□□□ -1.33
SGN1YIR001C SKI3P17883 1432 aaKnown RBP6.7□□□□□ -1.34
SGN1YIR001C TAF2P23255 1407 aa6.69□□□□□ -1.34
SGN1YIR001C WSC3Q12215 556 aa6.69□□□□□ -1.34
SGN1YIR001C TIF11P38912 153 aaKnown RBP6.67□□□□□ -1.34
SGN1YIR001C SSK2P53599 1579 aa6.66□□□□□ -1.34
SGN1YIR001C YCF1P39109 1515 aaKnown RBP6.66□□□□□ -1.34
SGN1YIR001C ESP1Q03018 1630 aa6.62□□□□□ -1.35
SGN1YIR001C SIN3P22579 1536 aa6.62□□□□□ -1.35
SGN1YIR001C SSN2P38931 1420 aa6.62□□□□□ -1.35
SGN1YIR001C NSR1P27476 414 aaKnown RBP RIP-Chip data6.6□□□□□ -1.35not detected
SGN1YIR001C LDB19Q12502 818 aa6.59□□□□□ -1.35
SGN1YIR001C ESC1Q03661 1658 aaKnown RBP6.56□□□□□ -1.36
SGN1YIR001C UFD4P33202 1483 aa6.56□□□□□ -1.36
SGN1YIR001C OXP1P28273 1286 aa6.56□□□□□ -1.36
SGN1YIR001C MIF2P35201 549 aa6.56□□□□□ -1.36
SGN1YIR001C BDF1P35817 686 aa6.55□□□□□ -1.36
SGN1YIR001C YIL055CP40523 627 aaKnown RBP6.54□□□□□ -1.36
SGN1YIR001C RQC2Q12532 1038 aaKnown RBP6.53□□□□□ -1.36
SGN1YIR001C EPS1P40557 701 aa6.52□□□□□ -1.37
SGN1YIR001C TY2B-LR1P0C2J3 1770 aa6.5□□□□□ -1.37
SGN1YIR001C TY2B-FP0CX63 1770 aa6.5□□□□□ -1.37
SGN1YIR001C TY2B-GR2P0CX64 1770 aa6.5□□□□□ -1.37
SGN1YIR001C TY2B-CP25384 1770 aa6.5□□□□□ -1.37
SGN1YIR001C TY2B-DR2Q03494 1770 aa6.5□□□□□ -1.37
SGN1YIR001C TY1B-DR1Q03855 1755 aa6.5□□□□□ -1.37
SGN1YIR001C TY2B-DR3Q07791 1770 aaKnown RBP6.5□□□□□ -1.37
SGN1YIR001C TY2B-OR1Q12113 1770 aa6.5□□□□□ -1.37
SGN1YIR001C TY2B-DR1Q12472 1770 aa6.5□□□□□ -1.37
SGN1YIR001C TY2B-OR2Q12501 1770 aa6.5□□□□□ -1.37
SGN1YIR001C MYO2P19524 1574 aaKnown RBP6.5□□□□□ -1.37
SGN1YIR001C YAP5P40574 245 aa6.5□□□□□ -1.37
Retrieved 100 of 5,963 RNA–protein pairs in 119.7 ms