RNA–Protein interactions for RNA: YGL103W

RPL28, Transcript of Ribosomal 60S subunit protein L28, yeastyeast

Gene RPL28, Length 450 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPL28YGL103W SGS1P35187 1447 aa8.04□□□□□ -1.12
RPL28YGL103W SPA2P23201 1466 aaKnown RBP7.89□□□□□ -1.15
RPL28YGL103W SSN2P38931 1420 aa7.82□□□□□ -1.16
RPL28YGL103W INO80P53115 1489 aa7.78□□□□□ -1.16
RPL28YGL103W MTC1P47018 478 aaKnown RBP7.71□□□□□ -1.18
RPL28YGL103W FAP1P53971 965 aa7.71□□□□□ -1.18
RPL28YGL103W DRS1P32892 752 aaKnown RBP7.68□□□□□ -1.18
RPL28YGL103W TCB3Q03640 1545 aaKnown RBP7.57□□□□□ -1.2
RPL28YGL103W TY1B-DR4Q07793 1604 aa7.38□□□□□ -1.23
RPL28YGL103W HSL1P34244 1518 aa7.37□□□□□ -1.23
RPL28YGL103W SPT6P23615 1451 aaKnown RBP7.36□□□□□ -1.23
RPL28YGL103W SKI3P17883 1432 aaKnown RBP7.34□□□□□ -1.23
RPL28YGL103W XRN1P22147 1528 aaKnown RBP7.29□□□□□ -1.24
RPL28YGL103W HIR3P47171 1648 aa7.25□□□□□ -1.25
RPL28YGL103W PRY3P47033 881 aa7.23□□□□□ -1.25
RPL28YGL103W REV3P14284 1504 aa7.2□□□□□ -1.26
RPL28YGL103W MMS22Q06164 1454 aa7.18□□□□□ -1.26
RPL28YGL103W TAF2P23255 1407 aa7.18□□□□□ -1.26
RPL28YGL103W THO2P53552 1597 aaKnown RBP7.16□□□□□ -1.26
RPL28YGL103W CHD1P32657 1468 aa7.14□□□□□ -1.27
RPL28YGL103W SWR1Q05471 1514 aa7.14□□□□□ -1.27
RPL28YGL103W SIN3P22579 1536 aa7.11□□□□□ -1.27
RPL28YGL103W MON2P48563 1636 aaPredicted RBP7.1□□□□□ -1.27
RPL28YGL103W SSK2P53599 1579 aa7.1□□□□□ -1.27
RPL28YGL103W SAS10Q12136 610 aaPredicted RBP7.08□□□□□ -1.28
RPL28YGL103W MYO2P19524 1574 aaKnown RBP7.06□□□□□ -1.28
RPL28YGL103W STU1P38198 1513 aa7.02□□□□□ -1.29
RPL28YGL103W YTA7P40340 1379 aa7.02□□□□□ -1.29
RPL28YGL103W RSE1Q04693 1361 aaKnown RBP7.02□□□□□ -1.29
RPL28YGL103W ESP1Q03018 1630 aa7.01□□□□□ -1.29
RPL28YGL103W POL1P13382 1468 aa7□□□□□ -1.29
RPL28YGL103W UFD4P33202 1483 aa6.97□□□□□ -1.29
RPL28YGL103W BPT1P14772 1559 aa6.95□□□□□ -1.3
RPL28YGL103W BUD4P47136 1447 aa6.93□□□□□ -1.3
RPL28YGL103W TRM732Q03496 1420 aa6.93□□□□□ -1.3
RPL28YGL103W NOP2P40991 618 aaKnown RBP6.93□□□□□ -1.3
RPL28YGL103W YPK9Q12697 1472 aa6.92□□□□□ -1.3
RPL28YGL103W IKI3Q06706 1349 aaKnown RBP6.92□□□□□ -1.3
RPL28YGL103W AAD16Q02895 342 aa6.9□□□□□ -1.3
RPL28YGL103W TAF7Q05021 590 aa6.9□□□□□ -1.3
RPL28YGL103W NSR1P27476 414 aaKnown RBP RIP-Chip data6.89□□□□□ -1.31 RIP-Chip
RPL28YGL103W SCC2Q04002 1493 aa6.89□□□□□ -1.31
RPL28YGL103W RKR1Q04781 1562 aa6.89□□□□□ -1.31
RPL28YGL103W DNA2P38859 1522 aa6.88□□□□□ -1.31
RPL28YGL103W YOR1P53049 1477 aa6.88□□□□□ -1.31
RPL28YGL103W ATG2P53855 1592 aa6.87□□□□□ -1.31
RPL28YGL103W MYO4P32492 1471 aa6.87□□□□□ -1.31
RPL28YGL103W ECM5Q03214 1411 aa6.86□□□□□ -1.31
RPL28YGL103W SPP41P38904 1435 aa6.85□□□□□ -1.31
RPL28YGL103W STH1P32597 1359 aa6.85□□□□□ -1.31
RPL28YGL103W IFH1P39520 1085 aa6.84□□□□□ -1.31
RPL28YGL103W KOG1P38873 1557 aa6.83□□□□□ -1.32
RPL28YGL103W PRI1P10363 409 aa6.83□□□□□ -1.32
RPL28YGL103W SMC4Q12267 1418 aa6.82□□□□□ -1.32
RPL28YGL103W SNQ2P32568 1501 aaKnown RBP6.81□□□□□ -1.32
RPL28YGL103W SSM4P40318 1319 aa6.81□□□□□ -1.32
RPL28YGL103W TOP2P06786 1428 aaKnown RBP6.8□□□□□ -1.32
RPL28YGL103W RPO31P04051 1460 aa6.79□□□□□ -1.32
RPL28YGL103W POL5P39985 1022 aaKnown RBP6.78□□□□□ -1.32
RPL28YGL103W PAN1P32521 1480 aa6.77□□□□□ -1.33
RPL28YGL103W MDS3P53094 1487 aa6.77□□□□□ -1.33
RPL28YGL103W PEP1P32319 1579 aa6.75□□□□□ -1.33
RPL28YGL103W HAA1Q12753 694 aaKnown RBP6.75□□□□□ -1.33
RPL28YGL103W GEA1P47102 1408 aaPredicted RBP6.75□□□□□ -1.33
RPL28YGL103W RQC2Q12532 1038 aaKnown RBP6.74□□□□□ -1.33
RPL28YGL103W YCF1P39109 1515 aaKnown RBP6.74□□□□□ -1.33
RPL28YGL103W NUP170P38181 1502 aa6.73□□□□□ -1.33
RPL28YGL103W PDR15Q04182 1529 aaKnown RBP6.73□□□□□ -1.33
RPL28YGL103W ENP1P38333 483 aaKnown RBP6.73□□□□□ -1.33
RPL28YGL103W RTT106P40161 455 aa6.73□□□□□ -1.33
RPL28YGL103W TSC11P40061 1430 aa6.71□□□□□ -1.34
RPL28YGL103W MLP2P40457 1679 aa6.71□□□□□ -1.34
RPL28YGL103W SEC3P33332 1336 aaKnown RBP6.65□□□□□ -1.35
RPL28YGL103W SPT7P35177 1332 aa6.65□□□□□ -1.35
RPL28YGL103W YCK3P39962 524 aa6.64□□□□□ -1.35
RPL28YGL103W ULS1Q08562 1619 aa6.64□□□□□ -1.35
RPL28YGL103W TY2B-LR1P0C2J3 1770 aa6.62□□□□□ -1.35
RPL28YGL103W TY2B-FP0CX63 1770 aa6.62□□□□□ -1.35
RPL28YGL103W TY2B-GR2P0CX64 1770 aa6.62□□□□□ -1.35
RPL28YGL103W TY2B-CP25384 1770 aa6.62□□□□□ -1.35
RPL28YGL103W TY2B-DR2Q03494 1770 aa6.62□□□□□ -1.35
RPL28YGL103W TY1B-DR1Q03855 1755 aa6.62□□□□□ -1.35
RPL28YGL103W TY2B-DR3Q07791 1770 aaKnown RBP6.62□□□□□ -1.35
RPL28YGL103W TY2B-OR1Q12113 1770 aa6.62□□□□□ -1.35
RPL28YGL103W TY2B-DR1Q12472 1770 aa6.62□□□□□ -1.35
RPL28YGL103W TY2B-OR2Q12501 1770 aa6.62□□□□□ -1.35
RPL28YGL103W TY1B-DR3Q99231 1755 aa6.62□□□□□ -1.35
RPL28YGL103W VPS15P22219 1454 aa6.6□□□□□ -1.35
RPL28YGL103W ISW2Q08773 1120 aa6.6□□□□□ -1.35
RPL28YGL103W VTH1P40438 1549 aa6.6□□□□□ -1.35
RPL28YGL103W VTH2P40890 1549 aa6.6□□□□□ -1.35
RPL28YGL103W LEU3P08638 886 aa6.58□□□□□ -1.36
RPL28YGL103W TY3B-GQ99315 1547 aa6.58□□□□□ -1.36
RPL28YGL103W TY2B-BQ12491 1770 aa6.57□□□□□ -1.36
RPL28YGL103W PDR10P51533 1564 aa6.57□□□□□ -1.36
RPL28YGL103W NOP7P53261 605 aaKnown RBP6.55□□□□□ -1.36
RPL28YGL103W DNF1P32660 1571 aa6.55□□□□□ -1.36
RPL28YGL103W SNT2P53127 1403 aa6.54□□□□□ -1.36
RPL28YGL103W CAT8P39113 1433 aa6.53□□□□□ -1.36
RPL28YGL103W CKB1P43639 278 aa6.52□□□□□ -1.37
Retrieved 100 of 5,963 RNA–protein pairs in 13.9 ms