RNA–Protein interactions for RNA: YDR409W

SIZ1, Transcript of SUMO/Smt3 ligase, yeastyeast

Gene SIZ1, Length 2,715 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SIZ1YDR409W DRS1P32892 752 aaKnown RBP6.46□□□□□ -1.38
SIZ1YDR409W FAP1P53971 965 aa6.32□□□□□ -1.4
SIZ1YDR409W TFA1P36100 482 aa6.2□□□□□ -1.42
SIZ1YDR409W PRY3P47033 881 aa6.04□□□□□ -1.44
SIZ1YDR409W BFR2Q06631 534 aaKnown RBP5.83□□□□□ -1.48
SIZ1YDR409W MTC1P47018 478 aaKnown RBP5.82□□□□□ -1.48
SIZ1YDR409W RQC2Q12532 1038 aaKnown RBP5.76□□□□□ -1.49
SIZ1YDR409W TAF7Q05021 590 aa5.67□□□□□ -1.5
SIZ1YDR409W BUD31P25337 157 aaPredicted RBP5.67□□□□□ -1.5
SIZ1YDR409W AVT3P36062 692 aa5.64□□□□□ -1.51
SIZ1YDR409W HAA1Q12753 694 aaKnown RBP5.44□□□□□ -1.54
SIZ1YDR409W DMA1P38823 416 aa5.33□□□□□ -1.56
SIZ1YDR409W DIP2Q12220 943 aaPredicted RBP5.31□□□□□ -1.56
SIZ1YDR409W SIS1P25294 352 aaKnown RBP5.3□□□□□ -1.56
SIZ1YDR409W SPA2P23201 1466 aaKnown RBP5.22□□□□□ -1.57
SIZ1YDR409W LEO1P38439 464 aa5.22□□□□□ -1.57
SIZ1YDR409W ABP1P15891 592 aaKnown RBP5.21□□□□□ -1.58
SIZ1YDR409W SGS1P35187 1447 aa5.19□□□□□ -1.58
SIZ1YDR409W MON2P48563 1636 aaPredicted RBP5.15□□□□□ -1.58
SIZ1YDR409W SSN2P38931 1420 aa5.12□□□□□ -1.59
SIZ1YDR409W INO80P53115 1489 aa5.04□□□□□ -1.6
SIZ1YDR409W IFH1P39520 1085 aa5.02□□□□□ -1.61
SIZ1YDR409W SAS10Q12136 610 aaPredicted RBP4.98□□□□□ -1.61
SIZ1YDR409W TCB3Q03640 1545 aaKnown RBP4.96□□□□□ -1.62
SIZ1YDR409W LEU3P08638 886 aa4.95□□□□□ -1.62
SIZ1YDR409W ORC1P54784 914 aaPredicted RBP4.95□□□□□ -1.62
SIZ1YDR409W IOC4Q04213 475 aa4.93□□□□□ -1.62
SIZ1YDR409W SKI3P17883 1432 aaKnown RBP4.92□□□□□ -1.62
SIZ1YDR409W TY1B-DR4Q07793 1604 aa4.92□□□□□ -1.62
SIZ1YDR409W DMA2P53924 522 aa4.87□□□□□ -1.63
SIZ1YDR409W RGA2Q06407 1009 aa4.85□□□□□ -1.63
SIZ1YDR409W YCK3P39962 524 aa4.83□□□□□ -1.64
SIZ1YDR409W KOG1P38873 1557 aa4.82□□□□□ -1.64
SIZ1YDR409W NAP1P25293 417 aaKnown RBP4.8□□□□□ -1.64
SIZ1YDR409W PTP3P40048 928 aa4.8□□□□□ -1.64
SIZ1YDR409W SWR1Q05471 1514 aa4.79□□□□□ -1.64
SIZ1YDR409W CHD1P32657 1468 aa4.78□□□□□ -1.64
SIZ1YDR409W HSL1P34244 1518 aa4.74□□□□□ -1.65
SIZ1YDR409W MMS22Q06164 1454 aa4.73□□□□□ -1.65
SIZ1YDR409W RIM101P33400 625 aa4.71□□□□□ -1.66
SIZ1YDR409W SPT21P35209 758 aa4.71□□□□□ -1.66
SIZ1YDR409W XRN1P22147 1528 aaKnown RBP4.71□□□□□ -1.66
SIZ1YDR409W SPT6P23615 1451 aaKnown RBP4.69□□□□□ -1.66
SIZ1YDR409W THO2P53552 1597 aaKnown RBP4.69□□□□□ -1.66
SIZ1YDR409W RSE1Q04693 1361 aaKnown RBP4.69□□□□□ -1.66
SIZ1YDR409W NOP8Q08287 484 aaPredicted RBP4.68□□□□□ -1.66
SIZ1YDR409W HIR3P47171 1648 aa4.67□□□□□ -1.66
SIZ1YDR409W SSP1P38871 571 aa4.66□□□□□ -1.66
SIZ1YDR409W RLF2Q12495 606 aa4.66□□□□□ -1.66
SIZ1YDR409W SIN3P22579 1536 aa4.66□□□□□ -1.66
SIZ1YDR409W OXP1P28273 1286 aa4.66□□□□□ -1.66
SIZ1YDR409W NOP2P40991 618 aaKnown RBP4.65□□□□□ -1.66
SIZ1YDR409W URN1Q06525 465 aaKnown RBP4.65□□□□□ -1.67
SIZ1YDR409W REV3P14284 1504 aa4.64□□□□□ -1.67
SIZ1YDR409W UFD4P33202 1483 aa4.64□□□□□ -1.67
SIZ1YDR409W SSK2P53599 1579 aa4.63□□□□□ -1.67
SIZ1YDR409W DNA2P38859 1522 aa4.63□□□□□ -1.67
SIZ1YDR409W NSR1P27476 414 aaKnown RBP RIP-Chip data4.63□□□□□ -1.67not detected
SIZ1YDR409W RPN1P38764 993 aaKnown RBP4.61□□□□□ -1.67
SIZ1YDR409W ATG36P46983 293 aa4.61□□□□□ -1.67
SIZ1YDR409W YLR271WQ06152 274 aa4.61□□□□□ -1.67
SIZ1YDR409W STU1P38198 1513 aa4.58□□□□□ -1.68
SIZ1YDR409W CKB1P43639 278 aa4.57□□□□□ -1.68
SIZ1YDR409W YML020WQ03722 664 aa4.57□□□□□ -1.68
SIZ1YDR409W ESP1Q03018 1630 aa4.56□□□□□ -1.68
SIZ1YDR409W TRM732Q03496 1420 aa4.56□□□□□ -1.68
SIZ1YDR409W POL1P13382 1468 aa4.56□□□□□ -1.68
SIZ1YDR409W MYO2P19524 1574 aaKnown RBP4.56□□□□□ -1.68
SIZ1YDR409W NUP170P38181 1502 aa4.54□□□□□ -1.68
SIZ1YDR409W SPP41P38904 1435 aa4.53□□□□□ -1.68
SIZ1YDR409W CST9Q06032 482 aa4.53□□□□□ -1.68
SIZ1YDR409W TAF2P23255 1407 aa4.53□□□□□ -1.68
SIZ1YDR409W YTA7P40340 1379 aa4.53□□□□□ -1.69
SIZ1YDR409W YPR148CQ06523 435 aa4.52□□□□□ -1.69
SIZ1YDR409W MAM3Q12296 706 aa4.52□□□□□ -1.69
SIZ1YDR409W IKI3Q06706 1349 aaKnown RBP4.52□□□□□ -1.69
SIZ1YDR409W ECM5Q03214 1411 aa4.51□□□□□ -1.69
SIZ1YDR409W BPT1P14772 1559 aa4.51□□□□□ -1.69
SIZ1YDR409W RPL17AP05740 184 aaKnown RBP4.5□□□□□ -1.69
SIZ1YDR409W RPL17BP46990 184 aaKnown RBP4.5□□□□□ -1.69
SIZ1YDR409W MRX12P47084 519 aa4.5□□□□□ -1.69
SIZ1YDR409W SCC2Q04002 1493 aa4.49□□□□□ -1.69
SIZ1YDR409W LAM6Q08001 693 aa4.48□□□□□ -1.69
SIZ1YDR409W MYO4P32492 1471 aa4.48□□□□□ -1.69
SIZ1YDR409W YPK9Q12697 1472 aa4.48□□□□□ -1.69
SIZ1YDR409W PEP1P32319 1579 aa4.47□□□□□ -1.69
SIZ1YDR409W YOR1P53049 1477 aa4.47□□□□□ -1.69
SIZ1YDR409W PAM1P37304 830 aaKnown RBP4.46□□□□□ -1.69
SIZ1YDR409W BUD4P47136 1447 aa4.45□□□□□ -1.7
SIZ1YDR409W SWE1P32944 819 aa4.45□□□□□ -1.7
SIZ1YDR409W ENP1P38333 483 aaKnown RBP4.45□□□□□ -1.7
SIZ1YDR409W SSM4P40318 1319 aa4.45□□□□□ -1.7
SIZ1YDR409W RKR1Q04781 1562 aa4.45□□□□□ -1.7
SIZ1YDR409W RAM2P29703 316 aa4.44□□□□□ -1.7
SIZ1YDR409W DSF2P38213 736 aa4.44□□□□□ -1.7
SIZ1YDR409W ATG2P53855 1592 aa4.44□□□□□ -1.7
SIZ1YDR409W GUA1P38625 525 aaKnown RBP4.43□□□□□ -1.7
SIZ1YDR409W MGA2P40578 1113 aa4.43□□□□□ -1.7
SIZ1YDR409W SUB2Q07478 446 aaKnown RBP4.43□□□□□ -1.7
SIZ1YDR409W STH1P32597 1359 aa4.43□□□□□ -1.7
Retrieved 100 of 5,963 RNA–protein pairs in 8.2 ms