RNA–Protein interactions for RNA: YDR223W

CRF1, Transcript of Transcriptional corepressor, yeastyeast

Gene CRF1, Length 1,404 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CRF1YDR223W DRS1P32892 752 aaKnown RBP13.83□□□□□ -0.2
CRF1YDR223W FAP1P53971 965 aa13.78□□□□□ -0.2
CRF1YDR223W MTC1P47018 478 aaKnown RBP13.65□□□□□ -0.22
CRF1YDR223W PRY3P47033 881 aa13.02□□□□□ -0.33
CRF1YDR223W AAD16Q02895 342 aa12.37□□□□□ -0.43
CRF1YDR223W BFR2Q06631 534 aaKnown RBP12.33□□□□□ -0.44
CRF1YDR223W YCK3P39962 524 aa12.32□□□□□ -0.44
CRF1YDR223W PRI1P10363 409 aa12.28□□□□□ -0.44
CRF1YDR223W HAA1Q12753 694 aaKnown RBP12.13□□□□□ -0.47
CRF1YDR223W TFA1P36100 482 aa12.1□□□□□ -0.47
CRF1YDR223W INO80P53115 1489 aa11.77□□□□□ -0.53
CRF1YDR223W MON2P48563 1636 aaPredicted RBP11.71□□□□□ -0.53
CRF1YDR223W SGS1P35187 1447 aa11.6□□□□□ -0.55
CRF1YDR223W ISW2Q08773 1120 aa11.6□□□□□ -0.55
CRF1YDR223W RPG1P38249 964 aaKnown RBP11.54□□□□□ -0.56
CRF1YDR223W TSR3Q12094 313 aaKnown RBP11.53□□□□□ -0.56
CRF1YDR223W TCB3Q03640 1545 aaKnown RBP11.51□□□□□ -0.57
CRF1YDR223W AVT3P36062 692 aa11.5□□□□□ -0.57
CRF1YDR223W DIP2Q12220 943 aaPredicted RBP11.5□□□□□ -0.57
CRF1YDR223W TY1B-DR4Q07793 1604 aa11.35□□□□□ -0.59
CRF1YDR223W SWR1Q05471 1514 aa11.31□□□□□ -0.6
CRF1YDR223W RQC2Q12532 1038 aaKnown RBP11.2□□□□□ -0.62
CRF1YDR223W DNA2P38859 1522 aa11.18□□□□□ -0.62
CRF1YDR223W KOG1P38873 1557 aa11.09□□□□□ -0.63
CRF1YDR223W MRPL32P25348 183 aa11.07□□□□□ -0.64
CRF1YDR223W SPT6P23615 1451 aaKnown RBP11.07□□□□□ -0.64
CRF1YDR223W HSL1P34244 1518 aa11.06□□□□□ -0.64
CRF1YDR223W SPA2P23201 1466 aaKnown RBP11.03□□□□□ -0.64
CRF1YDR223W YGL015CP33199 130 aa11□□□□□ -0.65
CRF1YDR223W HIR3P47171 1648 aa10.85□□□□□ -0.67
CRF1YDR223W SSN2P38931 1420 aa10.85□□□□□ -0.67
CRF1YDR223W XRN1P22147 1528 aaKnown RBP10.74□□□□□ -0.69
CRF1YDR223W ECM5Q03214 1411 aa10.7□□□□□ -0.7
CRF1YDR223W BUD31P25337 157 aaPredicted RBP10.67□□□□□ -0.7
CRF1YDR223W BUD4P47136 1447 aa10.66□□□□□ -0.7
CRF1YDR223W THO2P53552 1597 aaKnown RBP10.65□□□□□ -0.7
CRF1YDR223W RSE1Q04693 1361 aaKnown RBP10.64□□□□□ -0.71
CRF1YDR223W REV3P14284 1504 aa10.53□□□□□ -0.72
CRF1YDR223W MDS3P53094 1487 aa10.49□□□□□ -0.73
CRF1YDR223W TAF2P23255 1407 aa10.46□□□□□ -0.74
CRF1YDR223W SIN3P22579 1536 aa10.43□□□□□ -0.74
CRF1YDR223W PEP1P32319 1579 aa10.41□□□□□ -0.74
CRF1YDR223W ATG2P53855 1592 aa10.41□□□□□ -0.74
CRF1YDR223W SKI3P17883 1432 aaKnown RBP10.38□□□□□ -0.75
CRF1YDR223W SSK2P53599 1579 aa10.34□□□□□ -0.75
CRF1YDR223W DMA1P38823 416 aa10.33□□□□□ -0.76
CRF1YDR223W REB1P21538 810 aa10.33□□□□□ -0.76
CRF1YDR223W CDC27P38042 758 aa10.31□□□□□ -0.76
CRF1YDR223W ESP1Q03018 1630 aa10.28□□□□□ -0.76
CRF1YDR223W RPL17AP05740 184 aaKnown RBP10.27□□□□□ -0.77
CRF1YDR223W RPL17BP46990 184 aaKnown RBP10.27□□□□□ -0.77
CRF1YDR223W MYO2P19524 1574 aaKnown RBP10.22□□□□□ -0.77
CRF1YDR223W BPT1P14772 1559 aa10.21□□□□□ -0.77
CRF1YDR223W YPK9Q12697 1472 aa10.17□□□□□ -0.78
CRF1YDR223W UFD4P33202 1483 aa10.15□□□□□ -0.79
CRF1YDR223W UBP10P53874 792 aaPredicted RBP10.15□□□□□ -0.79
CRF1YDR223W TAF7Q05021 590 aa10.14□□□□□ -0.79
CRF1YDR223W MAP2P38174 421 aaKnown RBP10.13□□□□□ -0.79
CRF1YDR223W PTP3P40048 928 aa10.12□□□□□ -0.79
CRF1YDR223W SCC2Q04002 1493 aa10.12□□□□□ -0.79
CRF1YDR223W RPO31P04051 1460 aa10.07□□□□□ -0.8
CRF1YDR223W YCF1P39109 1515 aaKnown RBP10.04□□□□□ -0.8
CRF1YDR223W SIS1P25294 352 aaKnown RBP10.02□□□□□ -0.81
CRF1YDR223W POL1P13382 1468 aa9.98□□□□□ -0.81
CRF1YDR223W TOP2P06786 1428 aaKnown RBP9.98□□□□□ -0.81
CRF1YDR223W YKR023WP36119 530 aaKnown RBP9.96□□□□□ -0.82
CRF1YDR223W RKR1Q04781 1562 aa9.94□□□□□ -0.82
CRF1YDR223W CHD1P32657 1468 aa9.93□□□□□ -0.82
CRF1YDR223W TY2B-LR1P0C2J3 1770 aa9.93□□□□□ -0.82
CRF1YDR223W TY2B-FP0CX63 1770 aa9.93□□□□□ -0.82
CRF1YDR223W TY2B-GR2P0CX64 1770 aa9.93□□□□□ -0.82
CRF1YDR223W TY2B-CP25384 1770 aa9.93□□□□□ -0.82
CRF1YDR223W TY2B-DR2Q03494 1770 aa9.93□□□□□ -0.82
CRF1YDR223W TY1B-DR1Q03855 1755 aa9.93□□□□□ -0.82
CRF1YDR223W TY2B-DR3Q07791 1770 aaKnown RBP9.93□□□□□ -0.82
CRF1YDR223W TY2B-OR1Q12113 1770 aa9.93□□□□□ -0.82
CRF1YDR223W TY2B-DR1Q12472 1770 aa9.93□□□□□ -0.82
CRF1YDR223W TY2B-OR2Q12501 1770 aa9.93□□□□□ -0.82
CRF1YDR223W STU1P38198 1513 aa9.93□□□□□ -0.82
CRF1YDR223W CDC25P04821 1589 aa9.91□□□□□ -0.82
CRF1YDR223W YOR1P53049 1477 aa9.88□□□□□ -0.83
CRF1YDR223W SMC4Q12267 1418 aa9.86□□□□□ -0.83
CRF1YDR223W PAN1P32521 1480 aa9.86□□□□□ -0.83
CRF1YDR223W RIM101P33400 625 aa9.85□□□□□ -0.83
CRF1YDR223W TY1B-BRQ12193 1756 aa9.85□□□□□ -0.83
CRF1YDR223W TY1B-GR3Q12316 1755 aa9.85□□□□□ -0.83
CRF1YDR223W TY1B-ORQ92393 1755 aa9.85□□□□□ -0.83
CRF1YDR223W MMS22Q06164 1454 aa9.83□□□□□ -0.84
CRF1YDR223W UBP9P39967 754 aa9.82□□□□□ -0.84
CRF1YDR223W TY2B-BQ12491 1770 aa9.82□□□□□ -0.84
CRF1YDR223W TY1B-DR3Q99231 1755 aa9.82□□□□□ -0.84
CRF1YDR223W SSP1P38871 571 aa9.82□□□□□ -0.84
CRF1YDR223W YTA7P40340 1379 aa9.81□□□□□ -0.84
CRF1YDR223W ESC1Q03661 1658 aaKnown RBP9.81□□□□□ -0.84
CRF1YDR223W LEO1P38439 464 aa9.8□□□□□ -0.84
CRF1YDR223W SPT21P35209 758 aa9.79□□□□□ -0.84
CRF1YDR223W TY1B-HO13535 1793 aa9.79□□□□□ -0.84
CRF1YDR223W TY1B-DR5P0C2I2 1755 aa9.79□□□□□ -0.84
CRF1YDR223W TY1B-DR6P0C2I3 1755 aa9.79□□□□□ -0.84
CRF1YDR223W TY1B-LR2P0C2I5 1755 aa9.79□□□□□ -0.84
Retrieved 100 of 5,963 RNA–protein pairs in 12.3 ms