RNA–Protein interactions for RNA: YDL116W

NUP84, Transcript of Subunit of the Nup84p subcomplex of the nuclear pore complex (NPC), yeastyeast

Gene NUP84, Length 2,181 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP84YDL116W DRS1P32892 752 aaKnown RBP12.62□□□□□ -0.39
NUP84YDL116W SGS1P35187 1447 aa11.5□□□□□ -0.57
NUP84YDL116W TFA1P36100 482 aa11.49□□□□□ -0.57
NUP84YDL116W MTC1P47018 478 aaKnown RBP11.43□□□□□ -0.58
NUP84YDL116W BFR2Q06631 534 aaKnown RBP11.4□□□□□ -0.59
NUP84YDL116W SSN2P38931 1420 aa11.19□□□□□ -0.62
NUP84YDL116W SPA2P23201 1466 aaKnown RBP11.14□□□□□ -0.63
NUP84YDL116W INO80P53115 1489 aa10.88□□□□□ -0.67
NUP84YDL116W RQC2Q12532 1038 aaKnown RBP10.83□□□□□ -0.68
NUP84YDL116W TCB3Q03640 1545 aaKnown RBP10.68□□□□□ -0.7
NUP84YDL116W TY1B-DR4Q07793 1604 aa10.61□□□□□ -0.71
NUP84YDL116W HSL1P34244 1518 aa10.58□□□□□ -0.72
NUP84YDL116W AVT3P36062 692 aa10.54□□□□□ -0.72
NUP84YDL116W SPT6P23615 1451 aaKnown RBP10.53□□□□□ -0.72
NUP84YDL116W XRN1P22147 1528 aaKnown RBP10.48□□□□□ -0.73
NUP84YDL116W TAF2P23255 1407 aa10.44□□□□□ -0.74
NUP84YDL116W HIR3P47171 1648 aa10.43□□□□□ -0.74
NUP84YDL116W RSE1Q04693 1361 aaKnown RBP10.42□□□□□ -0.74
NUP84YDL116W DIP2Q12220 943 aaPredicted RBP10.35□□□□□ -0.75
NUP84YDL116W REV3P14284 1504 aa10.3□□□□□ -0.76
NUP84YDL116W TAF7Q05021 590 aa10.28□□□□□ -0.76
NUP84YDL116W SWR1Q05471 1514 aa10.26□□□□□ -0.77
NUP84YDL116W SKI3P17883 1432 aaKnown RBP10.25□□□□□ -0.77
NUP84YDL116W MMS22Q06164 1454 aa10.23□□□□□ -0.77
NUP84YDL116W SAS10Q12136 610 aaPredicted RBP10.21□□□□□ -0.77
NUP84YDL116W MON2P48563 1636 aaPredicted RBP10.18□□□□□ -0.78
NUP84YDL116W THO2P53552 1597 aaKnown RBP10.17□□□□□ -0.78
NUP84YDL116W SSK2P53599 1579 aa10.16□□□□□ -0.78
NUP84YDL116W BPT1P14772 1559 aa10.09□□□□□ -0.79
NUP84YDL116W SIN3P22579 1536 aa10.09□□□□□ -0.79
NUP84YDL116W STU1P38198 1513 aa10.08□□□□□ -0.8
NUP84YDL116W ESP1Q03018 1630 aa10.07□□□□□ -0.8
NUP84YDL116W CHD1P32657 1468 aa10.02□□□□□ -0.81
NUP84YDL116W NSR1P27476 414 aaKnown RBP RIP-Chip data10.01□□□□□ -0.81not detected
NUP84YDL116W MYO2P19524 1574 aaKnown RBP9.99□□□□□ -0.81
NUP84YDL116W TRM732Q03496 1420 aa9.96□□□□□ -0.81
NUP84YDL116W SCC2Q04002 1493 aa9.94□□□□□ -0.82
NUP84YDL116W POL1P13382 1468 aa9.94□□□□□ -0.82
NUP84YDL116W DMA1P38823 416 aa9.92□□□□□ -0.82
NUP84YDL116W UFD4P33202 1483 aa9.92□□□□□ -0.82
NUP84YDL116W ATG2P53855 1592 aa9.89□□□□□ -0.83
NUP84YDL116W RKR1Q04781 1562 aa9.87□□□□□ -0.83
NUP84YDL116W NOP2P40991 618 aaKnown RBP9.87□□□□□ -0.83
NUP84YDL116W ECM5Q03214 1411 aa9.86□□□□□ -0.83
NUP84YDL116W IFH1P39520 1085 aa9.85□□□□□ -0.83
NUP84YDL116W DNA2P38859 1522 aa9.85□□□□□ -0.83
NUP84YDL116W BUD4P47136 1447 aa9.85□□□□□ -0.83
NUP84YDL116W SSM4P40318 1319 aa9.84□□□□□ -0.83
NUP84YDL116W YTA7P40340 1379 aa9.84□□□□□ -0.83
NUP84YDL116W YPK9Q12697 1472 aa9.82□□□□□ -0.84
NUP84YDL116W IKI3Q06706 1349 aaKnown RBP9.79□□□□□ -0.84
NUP84YDL116W YOR1P53049 1477 aa9.78□□□□□ -0.84
NUP84YDL116W STH1P32597 1359 aa9.76□□□□□ -0.85
NUP84YDL116W SNQ2P32568 1501 aaKnown RBP9.72□□□□□ -0.85
NUP84YDL116W PEP1P32319 1579 aa9.7□□□□□ -0.86
NUP84YDL116W KOG1P38873 1557 aa9.7□□□□□ -0.86
NUP84YDL116W RTT106P40161 455 aa9.69□□□□□ -0.86
NUP84YDL116W MDS3P53094 1487 aa9.68□□□□□ -0.86
NUP84YDL116W MLP2P40457 1679 aa9.67□□□□□ -0.86
NUP84YDL116W MYO4P32492 1471 aa9.67□□□□□ -0.86
NUP84YDL116W PDR15Q04182 1529 aaKnown RBP9.67□□□□□ -0.86
NUP84YDL116W TY2B-LR1P0C2J3 1770 aa9.66□□□□□ -0.86
NUP84YDL116W TY2B-FP0CX63 1770 aa9.66□□□□□ -0.86
NUP84YDL116W TY2B-GR2P0CX64 1770 aa9.66□□□□□ -0.86
NUP84YDL116W TY2B-CP25384 1770 aa9.66□□□□□ -0.86
NUP84YDL116W TY2B-DR2Q03494 1770 aa9.66□□□□□ -0.86
NUP84YDL116W TY1B-DR1Q03855 1755 aa9.66□□□□□ -0.86
NUP84YDL116W TY2B-DR3Q07791 1770 aaKnown RBP9.66□□□□□ -0.86
NUP84YDL116W TY2B-OR1Q12113 1770 aa9.66□□□□□ -0.86
NUP84YDL116W TY2B-DR1Q12472 1770 aa9.66□□□□□ -0.86
NUP84YDL116W TY2B-OR2Q12501 1770 aa9.66□□□□□ -0.86
NUP84YDL116W TY1B-DR3Q99231 1755 aa9.66□□□□□ -0.86
NUP84YDL116W RPO31P04051 1460 aa9.64□□□□□ -0.87
NUP84YDL116W YCF1P39109 1515 aaKnown RBP9.63□□□□□ -0.87
NUP84YDL116W TOP2P06786 1428 aaKnown RBP9.63□□□□□ -0.87
NUP84YDL116W SPP41P38904 1435 aa9.61□□□□□ -0.87
NUP84YDL116W GEA1P47102 1408 aaPredicted RBP9.61□□□□□ -0.87
NUP84YDL116W LEU3P08638 886 aa9.61□□□□□ -0.87
NUP84YDL116W SMC4Q12267 1418 aa9.6□□□□□ -0.87
NUP84YDL116W SPT7P35177 1332 aa9.6□□□□□ -0.87
NUP84YDL116W LEO1P38439 464 aa9.58□□□□□ -0.88
NUP84YDL116W TY2B-BQ12491 1770 aa9.58□□□□□ -0.88
NUP84YDL116W ULS1Q08562 1619 aa9.58□□□□□ -0.88
NUP84YDL116W POL5P39985 1022 aaKnown RBP9.57□□□□□ -0.88
NUP84YDL116W TSC11P40061 1430 aa9.57□□□□□ -0.88
NUP84YDL116W NUP170P38181 1502 aa9.57□□□□□ -0.88
NUP84YDL116W PAN1P32521 1480 aa9.57□□□□□ -0.88
NUP84YDL116W TY3B-GQ99315 1547 aa9.54□□□□□ -0.88
NUP84YDL116W ORC1P54784 914 aaPredicted RBP9.52□□□□□ -0.89
NUP84YDL116W PDR10P51533 1564 aa9.5□□□□□ -0.89
NUP84YDL116W ENP1P38333 483 aaKnown RBP9.47□□□□□ -0.89
NUP84YDL116W VPS15P22219 1454 aa9.46□□□□□ -0.89
NUP84YDL116W TY1B-HO13535 1793 aa9.45□□□□□ -0.9
NUP84YDL116W TY1B-DR5P0C2I2 1755 aa9.45□□□□□ -0.9
NUP84YDL116W TY1B-DR6P0C2I3 1755 aa9.45□□□□□ -0.9
NUP84YDL116W TY1B-LR2P0C2I5 1755 aa9.45□□□□□ -0.9
NUP84YDL116W TY1B-LR3P0C2I6 1755 aaKnown RBP9.45□□□□□ -0.9
NUP84YDL116W TY1B-PR1P0C2I9 1755 aaKnown RBP9.45□□□□□ -0.9
NUP84YDL116W TY1B-PR2P0C2J0 1756 aa9.45□□□□□ -0.9
NUP84YDL116W TY1B-PR3P0C2J1 1755 aaKnown RBP9.45□□□□□ -0.9
Retrieved 100 of 5,963 RNA–protein pairs in 15.5 ms