RNA–Protein interactions for RNA: YAL058W

CNE1, Transcript of Calnexin, yeastyeast

Gene CNE1, Length 1,509 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CNE1YAL058W MTC1P47018 478 aaKnown RBP11.92□□□□□ -0.5
CNE1YAL058W MON2P48563 1636 aaPredicted RBP11.24□□□□□ -0.61
CNE1YAL058W DRS1P32892 752 aaKnown RBP11.21□□□□□ -0.61
CNE1YAL058W INO80P53115 1489 aa11.19□□□□□ -0.62
CNE1YAL058W TCB3Q03640 1545 aaKnown RBP10.88□□□□□ -0.67
CNE1YAL058W SGS1P35187 1447 aa10.8□□□□□ -0.68
CNE1YAL058W TY1B-DR4Q07793 1604 aa10.79□□□□□ -0.68
CNE1YAL058W SWR1Q05471 1514 aa10.79□□□□□ -0.68
CNE1YAL058W FAP1P53971 965 aa10.68□□□□□ -0.7
CNE1YAL058W DNA2P38859 1522 aa10.65□□□□□ -0.7
CNE1YAL058W KOG1P38873 1557 aa10.6□□□□□ -0.71
CNE1YAL058W HSL1P34244 1518 aa10.49□□□□□ -0.73
CNE1YAL058W SPT6P23615 1451 aaKnown RBP10.47□□□□□ -0.73
CNE1YAL058W SPA2P23201 1466 aaKnown RBP10.41□□□□□ -0.74
CNE1YAL058W HIR3P47171 1648 aa10.27□□□□□ -0.77
CNE1YAL058W RSE1Q04693 1361 aaKnown RBP10.16□□□□□ -0.78
CNE1YAL058W THO2P53552 1597 aaKnown RBP10.13□□□□□ -0.79
CNE1YAL058W BUD4P47136 1447 aa10.11□□□□□ -0.79
CNE1YAL058W XRN1P22147 1528 aaKnown RBP10.1□□□□□ -0.79
CNE1YAL058W ECM5Q03214 1411 aa10.09□□□□□ -0.79
CNE1YAL058W SSN2P38931 1420 aa10.08□□□□□ -0.8
CNE1YAL058W PRY3P47033 881 aa10.02□□□□□ -0.8
CNE1YAL058W PRI1P10363 409 aa10.02□□□□□ -0.81
CNE1YAL058W MDS3P53094 1487 aa9.99□□□□□ -0.81
CNE1YAL058W AAD16Q02895 342 aa9.97□□□□□ -0.81
CNE1YAL058W REV3P14284 1504 aa9.95□□□□□ -0.82
CNE1YAL058W ISW2Q08773 1120 aa9.9□□□□□ -0.82
CNE1YAL058W PEP1P32319 1579 aa9.89□□□□□ -0.83
CNE1YAL058W ATG2P53855 1592 aa9.89□□□□□ -0.83
CNE1YAL058W SIN3P22579 1536 aa9.86□□□□□ -0.83
CNE1YAL058W DIP2Q12220 943 aaPredicted RBP9.81□□□□□ -0.84
CNE1YAL058W TAF2P23255 1407 aa9.78□□□□□ -0.84
CNE1YAL058W SSK2P53599 1579 aa9.78□□□□□ -0.84
CNE1YAL058W RPG1P38249 964 aaKnown RBP9.77□□□□□ -0.85
CNE1YAL058W SKI3P17883 1432 aaKnown RBP9.75□□□□□ -0.85
CNE1YAL058W BPT1P14772 1559 aa9.71□□□□□ -0.86
CNE1YAL058W ESP1Q03018 1630 aa9.7□□□□□ -0.86
CNE1YAL058W MYO2P19524 1574 aaKnown RBP9.65□□□□□ -0.86
CNE1YAL058W YPK9Q12697 1472 aa9.58□□□□□ -0.88
CNE1YAL058W YCF1P39109 1515 aaKnown RBP9.56□□□□□ -0.88
CNE1YAL058W UFD4P33202 1483 aa9.55□□□□□ -0.88
CNE1YAL058W SCC2Q04002 1493 aa9.55□□□□□ -0.88
CNE1YAL058W RPO31P04051 1460 aa9.47□□□□□ -0.89
CNE1YAL058W TSR3Q12094 313 aaKnown RBP9.46□□□□□ -0.89
CNE1YAL058W AVT3P36062 692 aa9.45□□□□□ -0.9
CNE1YAL058W HAA1Q12753 694 aaKnown RBP9.42□□□□□ -0.9
CNE1YAL058W YCK3P39962 524 aa9.41□□□□□ -0.9
CNE1YAL058W TY2B-LR1P0C2J3 1770 aa9.4□□□□□ -0.9
CNE1YAL058W TY2B-FP0CX63 1770 aa9.4□□□□□ -0.9
CNE1YAL058W TY2B-GR2P0CX64 1770 aa9.4□□□□□ -0.9
CNE1YAL058W TY2B-CP25384 1770 aa9.4□□□□□ -0.9
CNE1YAL058W TY2B-DR2Q03494 1770 aa9.4□□□□□ -0.9
CNE1YAL058W TY1B-DR1Q03855 1755 aa9.4□□□□□ -0.9
CNE1YAL058W TY2B-DR3Q07791 1770 aaKnown RBP9.4□□□□□ -0.9
CNE1YAL058W TY2B-OR1Q12113 1770 aa9.4□□□□□ -0.9
CNE1YAL058W TY2B-DR1Q12472 1770 aa9.4□□□□□ -0.9
CNE1YAL058W TY2B-OR2Q12501 1770 aa9.4□□□□□ -0.9
CNE1YAL058W CDC25P04821 1589 aa9.4□□□□□ -0.9
CNE1YAL058W CHD1P32657 1468 aa9.38□□□□□ -0.91
CNE1YAL058W TOP2P06786 1428 aaKnown RBP9.37□□□□□ -0.91
CNE1YAL058W RKR1Q04781 1562 aa9.35□□□□□ -0.91
CNE1YAL058W POL1P13382 1468 aa9.35□□□□□ -0.91
CNE1YAL058W ESC1Q03661 1658 aaKnown RBP9.35□□□□□ -0.91
CNE1YAL058W BFR2Q06631 534 aaKnown RBP9.35□□□□□ -0.91
CNE1YAL058W TY1B-BRQ12193 1756 aa9.33□□□□□ -0.92
CNE1YAL058W TY1B-GR3Q12316 1755 aa9.33□□□□□ -0.92
CNE1YAL058W TY1B-ORQ92393 1755 aa9.33□□□□□ -0.92
CNE1YAL058W RQC2Q12532 1038 aaKnown RBP9.32□□□□□ -0.92
CNE1YAL058W PAN1P32521 1480 aa9.31□□□□□ -0.92
CNE1YAL058W TY2B-BQ12491 1770 aa9.3□□□□□ -0.92
CNE1YAL058W DNF1P32660 1571 aa9.28□□□□□ -0.92
CNE1YAL058W TY1B-DR3Q99231 1755 aa9.28□□□□□ -0.92
CNE1YAL058W STU1P38198 1513 aa9.27□□□□□ -0.93
CNE1YAL058W YOR1P53049 1477 aa9.27□□□□□ -0.93
CNE1YAL058W TY1B-HO13535 1793 aa9.26□□□□□ -0.93
CNE1YAL058W TY1B-DR5P0C2I2 1755 aa9.26□□□□□ -0.93
CNE1YAL058W TY1B-DR6P0C2I3 1755 aa9.26□□□□□ -0.93
CNE1YAL058W TY1B-LR2P0C2I5 1755 aa9.26□□□□□ -0.93
CNE1YAL058W TY1B-LR3P0C2I6 1755 aaKnown RBP9.26□□□□□ -0.93
CNE1YAL058W TY1B-PR1P0C2I9 1755 aaKnown RBP9.26□□□□□ -0.93
CNE1YAL058W TY1B-PR2P0C2J0 1756 aa9.26□□□□□ -0.93
CNE1YAL058W TY1B-PR3P0C2J1 1755 aaKnown RBP9.26□□□□□ -0.93
CNE1YAL058W TY1B-JR1P47098 1755 aa9.26□□□□□ -0.93
CNE1YAL058W TY1B-ML2Q03434 1755 aaKnown RBP9.26□□□□□ -0.93
CNE1YAL058W TY1B-ER1Q03612 1755 aa9.26□□□□□ -0.93
CNE1YAL058W TY1B-ML1Q04711 1755 aaKnown RBP9.26□□□□□ -0.93
CNE1YAL058W TY1B-GR2Q12269 1755 aa9.26□□□□□ -0.93
CNE1YAL058W TY1B-OLQ12273 1755 aa9.26□□□□□ -0.93
CNE1YAL058W TY1B-PLQ12414 1755 aaKnown RBP9.26□□□□□ -0.93
CNE1YAL058W MET5P47169 1442 aa9.25□□□□□ -0.93
CNE1YAL058W MMS22Q06164 1454 aa9.25□□□□□ -0.93
CNE1YAL058W SMC4Q12267 1418 aa9.25□□□□□ -0.93
CNE1YAL058W RPA190P10964 1664 aaKnown RBP9.23□□□□□ -0.93
CNE1YAL058W TRM732Q03496 1420 aa9.19□□□□□ -0.94
CNE1YAL058W SPP41P38904 1435 aa9.18□□□□□ -0.94
CNE1YAL058W RPL17AP05740 184 aaKnown RBP9.15□□□□□ -0.95
CNE1YAL058W RPL17BP46990 184 aaKnown RBP9.15□□□□□ -0.95
CNE1YAL058W LTE1P07866 1435 aa9.14□□□□□ -0.95
CNE1YAL058W REB1P21538 810 aa9.12□□□□□ -0.95
CNE1YAL058W MRPL32P25348 183 aa9.12□□□□□ -0.95
Retrieved 100 of 5,963 RNA–protein pairs in 17.3 ms