RNA–Protein interactions for RNA: ENST00000490115.5

PFKFB4-213, Transcript of 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4, humanhuman

TSL 1 (best)

Gene PFKFB4, Length 1,757 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFKFB4-213ENST00000490115 UTP3Q9NQZ2 479 aaKnown RBP eCLIP20.34■□□□□ 0.852e-7■■■■■ 355.8
PFKFB4-213ENST00000490115 SF3B1O75533 1304 aaKnown RBP eCLIP19.69■□□□□ 0.742e-6■■■■■ 101.2
PFKFB4-213ENST00000490115 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP19.55■□□□□ 0.723e-22■■■■■ 75.3
PFKFB4-213ENST00000490115 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP18.88■□□□□ 0.612e-7■■■■■ 55.5
PFKFB4-213ENST00000490115 SF3B4Q15427 424 aaKnown RBP eCLIP16.63■□□□□ 0.252e-9■■■■■ 46.4
PFKFB4-213ENST00000490115 HNRNPLP14866 589 aaKnown RBP eCLIP18.88■□□□□ 0.617e-14■■■■■ 42.4
PFKFB4-213ENST00000490115 GTF2F1P35269 517 aaKnown RBP eCLIP21.34■■□□□ 1.012e-7■■■■■ 40.4
PFKFB4-213ENST00000490115 FUSP35637 526 aaKnown RBP eCLIP11.85□□□□□ -0.511e-10■■■■■ 37.9
PFKFB4-213ENST00000490115 SF3A3Q12874 501 aaKnown RBP eCLIP19.35■□□□□ 0.694e-7■■■■■ 36.7
PFKFB4-213ENST00000490115 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.12■□□□□ 0.494e-6■■■■■ 36.3
PFKFB4-213ENST00000490115 AGGF1Q8N302 714 aaeCLIP19.55■□□□□ 0.722e-8■■■■■ 34.6
PFKFB4-213ENST00000490115 PCBP2Q15366 365 aaKnown RBP eCLIP18.75■□□□□ 0.593e-8■■■■■ 34.3
PFKFB4-213ENST00000490115 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.41■□□□□ 0.861e-8■■■■■ 32.9
PFKFB4-213ENST00000490115 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP14.59□□□□□ -0.072e-16■■■■■ 30.7
PFKFB4-213ENST00000490115 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.12■■□□□ 1.935e-8■■■■■ 28.6
PFKFB4-213ENST00000490115 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP20.38■□□□□ 0.855e-8■■■■■ 28.6
PFKFB4-213ENST00000490115 RBFOX2O43251 390 aaKnown RBP eCLIP15.72■□□□□ 0.113e-7■■■■■ 28.1
PFKFB4-213ENST00000490115 AQRO60306 1485 aaKnown RBP eCLIP28.7■■■□□ 2.194e-7■■■■■ 27.5
PFKFB4-213ENST00000490115 FMR1Q06787 632 aaKnown RBP eCLIP21.46■■□□□ 1.032e-7■■■■■ 26.8
PFKFB4-213ENST00000490115 MATR3P43243 847 aaKnown RBP eCLIP20.4■□□□□ 0.862e-7■■■■□ 26.6
PFKFB4-213ENST00000490115 PPIGQ13427 754 aaKnown RBP eCLIP18.88■□□□□ 0.613e-7■■■■□ 26.2
PFKFB4-213ENST00000490115 EFTUD2Q15029 972 aaKnown RBP eCLIP19.55■□□□□ 0.722e-7■■■■□ 25.8
PFKFB4-213ENST00000490115 ILF3Q12906 894 aaKnown RBP eCLIP17.95■□□□□ 0.461e-7■■■■□ 25.6
PFKFB4-213ENST00000490115 QKIQ96PU8 341 aaKnown RBP eCLIP19.67■□□□□ 0.747e-12■■■■□ 25.1
PFKFB4-213ENST00000490115 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP17.15■□□□□ 0.342e-7■■■■□ 25.1
PFKFB4-213ENST00000490115 PRPF4O43172 522 aaKnown RBP eCLIP19.65■□□□□ 0.741e-6■■■■□ 25.1
PFKFB4-213ENST00000490115 PCBP1Q15365 356 aaKnown RBP eCLIP20.16■□□□□ 0.823e-6■■■■□ 23.3
PFKFB4-213ENST00000490115 EWSR1Q01844 656 aaKnown RBP eCLIP15.87■□□□□ 0.139e-9■■■■□ 21.5
PFKFB4-213ENST00000490115 HNRNPMP52272 730 aaKnown RBP eCLIP26.99■■□□□ 1.916e-6■■■■□ 20.3
PFKFB4-213ENST00000490115 NCBP2P52298 156 aaKnown RBP eCLIP17.94■□□□□ 0.462e-6■■■■□ 20.2
PFKFB4-213ENST00000490115 RBM22Q9NW64 420 aaKnown RBP eCLIP19.3■□□□□ 0.684e-7■■■■□ 19.5
PFKFB4-213ENST00000490115 NOL12Q9UGY1 213 aaKnown RBP eCLIP20.85■□□□□ 0.939e-7■■■■□ 19.3
PFKFB4-213ENST00000490115 TARDBPQ13148 414 aaKnown RBP eCLIP17.74■□□□□ 0.437e-11■■■□□ 18.9
PFKFB4-213ENST00000490115 RBM5P52756 815 aaKnown RBP eCLIP21.48■■□□□ 1.033e-6■■■□□ 18.7
PFKFB4-213ENST00000490115 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP17.66■□□□□ 0.421e-6■■■□□ 17.9
PFKFB4-213ENST00000490115 CDC40O60508 579 aaKnown RBP eCLIP17.3■□□□□ 0.363e-7■■■□□ 17.8
PFKFB4-213ENST00000490115 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.72■■□□□ 1.553e-10■■■□□ 17.2
PFKFB4-213ENST00000490115 DDX24Q9GZR7 859 aaKnown RBP eCLIP22.56■■□□□ 1.29e-7■■■□□ 17.2
PFKFB4-213ENST00000490115 RBM15Q96T37 977 aaKnown RBP eCLIP19.83■□□□□ 0.771e-9■■■□□ 16.2
PFKFB4-213ENST00000490115 POLR2GP62487 172 aaKnown RBP eCLIP15.87■□□□□ 0.138e-8■■■□□ 15.9
PFKFB4-213ENST00000490115 XRN2Q9H0D6 950 aaKnown RBP eCLIP19.47■□□□□ 0.711e-6■■■□□ 14.9
PFKFB4-213ENST00000490115 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.29■■■□□ 2.126e-8■■■□□ 14.8
PFKFB4-213ENST00000490115 LIN28BQ6ZN17 250 aaKnown RBP eCLIP19.19■□□□□ 0.666e-8■■□□□ 14.5
PFKFB4-213ENST00000490115 YBX3P16989 372 aaKnown RBP eCLIP20.59■□□□□ 0.891e-6■■□□□ 14.3
PFKFB4-213ENST00000490115 DDX3XO00571 662 aaKnown RBP eCLIP20.57■□□□□ 0.889e-20■■□□□ 14.2
PFKFB4-213ENST00000490115 DDX6P26196 483 aaKnown RBP eCLIP18.9■□□□□ 0.622e-6■■□□□ 14.2
PFKFB4-213ENST00000490115 NKRFO15226 690 aaKnown RBP eCLIP20.94■□□□□ 0.944e-11■■□□□ 14
PFKFB4-213ENST00000490115 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP19.77■□□□□ 0.768e-7■■□□□ 13.9
PFKFB4-213ENST00000490115 SMNDC1O75940 238 aaKnown RBP eCLIP18.5■□□□□ 0.553e-7■■□□□ 13.5
PFKFB4-213ENST00000490115 TROVE2P10155 538 aaKnown RBP eCLIP19.37■□□□□ 0.692e-6■■□□□ 13.2
PFKFB4-213ENST00000490115 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP21.24■□□□□ 0.997e-9■■□□□ 12.4
PFKFB4-213ENST00000490115 KHSRPQ92945 711 aaKnown RBP eCLIP19.85■□□□□ 0.776e-6■■□□□ 12.2
PFKFB4-213ENST00000490115 GPKOWQ92917 476 aaPredicted RBP eCLIP21.61■■□□□ 1.056e-6■■□□□ 12
PFKFB4-213ENST00000490115 XPO5Q9HAV4 1204 aaKnown RBP eCLIP21.32■■□□□ 12e-6■■□□□ 11.9
PFKFB4-213ENST00000490115 TAF15Q92804 592 aaKnown RBP eCLIP15.59■□□□□ 0.098e-7■■□□□ 11.4
PFKFB4-213ENST00000490115 PTBP1P26599 531 aaKnown RBP eCLIP17.23■□□□□ 0.355e-9■□□□□ 11.2
PFKFB4-213ENST00000490115 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.48■■□□□ 1.836e-12■□□□□ 11
PFKFB4-213ENST00000490115 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.68■■□□□ 1.389e-11■□□□□ 10.1
PFKFB4-213ENST00000490115 AATFQ9NY61 560 aaKnown RBP eCLIP22.02■■□□□ 1.111e-6■□□□□ 9.7
PFKFB4-213ENST00000490115 ZNF622Q969S3 477 aaKnown RBP eCLIP21.67■■□□□ 1.062e-7■□□□□ 8.7
PFKFB4-213ENST00000490115 TIA1P31483 386 aaKnown RBP eCLIP18.29■□□□□ 0.525e-6■□□□□ 8.7
PFKFB4-213ENST00000490115 RPS3P23396 243 aaKnown RBP eCLIP18.85■□□□□ 0.614e-6■□□□□ 8.2
Retrieved 62 of 62 RNA–protein pairs in 12.2 ms