RNA–Protein interactions for RNA: ENST00000490115.5

PFKFB4-213, Transcript of 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4, humanhuman

TSL 1 (best)

Gene PFKFB4, Length 1,757 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFKFB4-213ENST00000490115 NISCHQ9Y2I1 1504 aa41.59■■■■■ 4.25
PFKFB4-213ENST00000490115 CCDC180Q9P1Z9 1646 aa35.99■■■■□ 3.35
PFKFB4-213ENST00000490115 ZCCHC6Q5VYS8 1495 aaKnown RBP35.08■■■■□ 3.21
PFKFB4-213ENST00000490115 DCAF1Q9Y4B6 1507 aa34.47■■■■□ 3.11
PFKFB4-213ENST00000490115 SHROOM4Q9ULL8 1493 aa34.21■■■■□ 3.07
PFKFB4-213ENST00000490115 DCAF8L2P0C7V8 631 aa34.02■■■■□ 3.04
PFKFB4-213ENST00000490115 MYO15BQ96JP2 1530 aa33.86■■■■□ 3.01
PFKFB4-213ENST00000490115 ABCC9O60706 1549 aa33.61■■■□□ 2.97
PFKFB4-213ENST00000490115 NACADO15069 1562 aa33.4■■■□□ 2.94
PFKFB4-213ENST00000490115 SUPT5HO00267 1087 aaKnown RBP33.24■■■□□ 2.91
PFKFB4-213ENST00000490115 SCRIBQ14160 1630 aa33.1■■■□□ 2.89
PFKFB4-213ENST00000490115 RB1CC1Q8TDY2 1594 aa32.94■■■□□ 2.86
PFKFB4-213ENST00000490115 RSF1Q96T23 1441 aaPredicted RBP32.49■■■□□ 2.79
PFKFB4-213ENST00000490115 CECR2Q9BXF3 1484 aa32.22■■■□□ 2.75
PFKFB4-213ENST00000490115 CHIC1Q5VXU3 224 aa32.21■■■□□ 2.75
PFKFB4-213ENST00000490115 UNC13AQ9UPW8 1703 aa32.2■■■□□ 2.74
PFKFB4-213ENST00000490115 MROH2BQ7Z745 1585 aa32.12■■■□□ 2.73
PFKFB4-213ENST00000490115 BAZ1AQ9NRL2 1556 aaPredicted RBP32.07■■■□□ 2.73
PFKFB4-213ENST00000490115 BICRAQ9NZM4 1560 aa31.92■■■□□ 2.7
PFKFB4-213ENST00000490115 WIZO95785 1651 aa31.84■■■□□ 2.69
PFKFB4-213ENST00000490115 SMARCA4P51532 1647 aa31.82■■■□□ 2.68
PFKFB4-213ENST00000490115 PABPN1Q86U42 306 aaKnown RBP eCLIP31.62■■■□□ 2.65
PFKFB4-213ENST00000490115 TOP2AP11388 1531 aaKnown RBP31.61■■■□□ 2.65
PFKFB4-213ENST00000490115 PEG3Q9GZU2 1588 aa31.48■■■□□ 2.63
PFKFB4-213ENST00000490115 EIF4G1Q04637 1599 aaKnown RBP31.32■■■□□ 2.6
PFKFB4-213ENST00000490115 SMARCA2P51531 1590 aa31.31■■■□□ 2.6
PFKFB4-213ENST00000490115 CCDC88BA6NC98 1476 aa31.28■■■□□ 2.6
PFKFB4-213ENST00000490115 TRIM41Q8WV44 630 aa31.28■■■□□ 2.6
PFKFB4-213ENST00000490115 ATAD2BQ9ULI0 1458 aa31.18■■■□□ 2.58
PFKFB4-213ENST00000490115 BAZ1BQ9UIG0 1483 aaKnown RBP31.01■■■□□ 2.56
PFKFB4-213ENST00000490115 LOC105371045A0A1W2PR82 267 aa30.92■■■□□ 2.54
PFKFB4-213ENST00000490115 NCAPD3P42695 1498 aa30.84■■■□□ 2.53
PFKFB4-213ENST00000490115 HMGXB3Q12766 1538 aa30.84■■■□□ 2.53
PFKFB4-213ENST00000490115 ABCC8Q09428 1581 aa30.75■■■□□ 2.51
PFKFB4-213ENST00000490115 FAM9AQ8IZU1 332 aaPredicted RBP30.62■■■□□ 2.49
PFKFB4-213ENST00000490115 WRNQ14191 1432 aaPredicted RBP eCLIP30.57■■■□□ 2.48
PFKFB4-213ENST00000490115 DNAJC5BQ9UF47 199 aa30.54■■■□□ 2.48
PFKFB4-213ENST00000490115 EEA1Q15075 1411 aa30.52■■■□□ 2.48
PFKFB4-213ENST00000490115 CC2D2AQ9P2K1 1620 aa30.41■■■□□ 2.46
PFKFB4-213ENST00000490115 SYNJ1O43426 1573 aa30.37■■■□□ 2.45
PFKFB4-213ENST00000490115 SOGA1O94964 1423 aa30.34■■■□□ 2.45
PFKFB4-213ENST00000490115 CFTRP13569 1480 aa30.31■■■□□ 2.44
PFKFB4-213ENST00000490115 TOP2BQ02880 1626 aa30.24■■■□□ 2.43
PFKFB4-213ENST00000490115 CSRNP3Q8WYN3 585 aa30.22■■■□□ 2.43
PFKFB4-213ENST00000490115 BIVM-ERCC5R4GMW8 1640 aa30.19■■■□□ 2.42
PFKFB4-213ENST00000490115 PCGF6Q9BYE7 350 aa30.16■■■□□ 2.42
PFKFB4-213ENST00000490115 RUSC2Q8N2Y8 1516 aa30.15■■■□□ 2.42
PFKFB4-213ENST00000490115 PRDM2Q13029 1718 aa30.11■■■□□ 2.41
PFKFB4-213ENST00000490115 TNIKQ9UKE5 1360 aa30.11■■■□□ 2.41
PFKFB4-213ENST00000490115 TRIM26Q12899 539 aaPredicted RBP30.1■■■□□ 2.41
PFKFB4-213ENST00000490115 EHMT2Q96KQ7 1210 aa30.09■■■□□ 2.41
PFKFB4-213ENST00000490115 CADPSQ9ULU8 1353 aa30.07■■■□□ 2.4
PFKFB4-213ENST00000490115 GOLGA3Q08378 1498 aa30.06■■■□□ 2.4
PFKFB4-213ENST00000490115 KIF21BO75037 1637 aa30.03■■■□□ 2.4
PFKFB4-213ENST00000490115 CEP164Q9UPV0 1460 aa30.01■■■□□ 2.4
PFKFB4-213ENST00000490115 CUX1P39880 1505 aa30■■■□□ 2.39
PFKFB4-213ENST00000490115 CEP162Q5TB80 1403 aa29.94■■■□□ 2.38
PFKFB4-213ENST00000490115 HRCP23327 699 aa29.85■■■□□ 2.37
PFKFB4-213ENST00000490115 UBTFP17480 764 aaKnown RBP29.83■■■□□ 2.37
PFKFB4-213ENST00000490115 KIF27Q86VH2 1401 aa29.76■■■□□ 2.35
PFKFB4-213ENST00000490115 ERICH3Q5RHP9 1530 aa29.75■■■□□ 2.35
PFKFB4-213ENST00000490115 PRXQ9BXM0 1461 aa29.72■■■□□ 2.35
PFKFB4-213ENST00000490115 FANCD2Q9BXW9 1451 aa29.72■■■□□ 2.35
PFKFB4-213ENST00000490115 RAPGEF2Q9Y4G8 1499 aa29.7■■■□□ 2.35
PFKFB4-213ENST00000490115 LAMC3Q9Y6N6 1575 aa29.66■■■□□ 2.34
PFKFB4-213ENST00000490115 CLIP1P30622 1438 aa29.58■■■□□ 2.33
PFKFB4-213ENST00000490115 FGD5Q6ZNL6 1462 aa29.58■■■□□ 2.33
PFKFB4-213ENST00000490115 DNMBPQ6XZF7 1577 aa29.57■■■□□ 2.32
PFKFB4-213ENST00000490115 NESP48681 1621 aa29.52■■■□□ 2.32
PFKFB4-213ENST00000490115 CUX2O14529 1486 aa29.5■■■□□ 2.31
PFKFB4-213ENST00000490115 TOPBP1Q92547 1522 aa29.46■■■□□ 2.31
PFKFB4-213ENST00000490115 VPS8Q8N3P4 1428 aa29.44■■■□□ 2.3
PFKFB4-213ENST00000490115 PDS5BQ9NTI5 1447 aa29.43■■■□□ 2.3
PFKFB4-213ENST00000490115 IGF1RP08069 1367 aa29.42■■■□□ 2.3
PFKFB4-213ENST00000490115 ABCA10Q8WWZ4 1543 aa29.38■■■□□ 2.29
PFKFB4-213ENST00000490115 POLA1P09884 1462 aaPredicted RBP29.36■■■□□ 2.29
PFKFB4-213ENST00000490115 PPARGC1BQ86YN6 1023 aaKnown RBP29.35■■■□□ 2.29
PFKFB4-213ENST00000490115 URB2Q14146 1524 aaKnown RBP29.3■■■□□ 2.28
PFKFB4-213ENST00000490115 CARMIL1Q5VZK9 1371 aa29.27■■■□□ 2.28
PFKFB4-213ENST00000490115 ZEB1P37275 1124 aaPredicted RBP29.26■■■□□ 2.28
PFKFB4-213ENST00000490115 RAD54L2Q9Y4B4 1467 aa29.23■■■□□ 2.27
PFKFB4-213ENST00000490115 ARAP1Q96P48 1450 aa29.21■■■□□ 2.27
PFKFB4-213ENST00000490115 WDR97A6NE52 1622 aa29.18■■■□□ 2.26
PFKFB4-213ENST00000490115 KIF21AQ7Z4S6 1674 aa29.15■■■□□ 2.26
PFKFB4-213ENST00000490115 CUL7Q14999 1698 aa29.14■■■□□ 2.25
PFKFB4-213ENST00000490115 APLP2Q06481 763 aa29.13■■■□□ 2.25
PFKFB4-213ENST00000490115 ARHGAP35Q9NRY4 1499 aa29.1■■■□□ 2.25
PFKFB4-213ENST00000490115 ABCA5Q8WWZ7 1642 aa29.06■■■□□ 2.24
PFKFB4-213ENST00000490115 RANGAP1P46060 587 aaPredicted RBP29.06■■■□□ 2.24
PFKFB4-213ENST00000490115 MRC2Q9UBG0 1479 aa29■■■□□ 2.23
PFKFB4-213ENST00000490115 TTBK1Q5TCY1 1321 aaPredicted RBP28.99■■■□□ 2.23
PFKFB4-213ENST00000490115 GAPVD1Q14C86 1478 aa28.97■■■□□ 2.23
PFKFB4-213ENST00000490115 TARBP1Q13395 1621 aaKnown RBP28.96■■■□□ 2.23
PFKFB4-213ENST00000490115 TDRD9Q8NDG6 1382 aaKnown RBP28.89■■■□□ 2.22
PFKFB4-213ENST00000490115 ERCC6Q03468 1493 aa28.88■■■□□ 2.21
PFKFB4-213ENST00000490115 EFCAB5A4FU69 1503 aa28.88■■■□□ 2.21
PFKFB4-213ENST00000490115 MAP3K1Q13233 1512 aa28.87■■■□□ 2.21
PFKFB4-213ENST00000490115 CTTNBP2Q8WZ74 1663 aa28.84■■■□□ 2.21
PFKFB4-213ENST00000490115 WDR62O43379 1518 aa28.83■■■□□ 2.21
PFKFB4-213ENST00000490115 FHAD1B1AJZ9 1412 aa28.83■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms