RNA–Protein interactions for RNA: ENST00000419810.6

HPCAL1-203, Transcript of hippocalcin like 1, humanhuman

TSL 1 (best)

Gene HPCAL1, Length 4,781 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPCAL1-203ENST00000419810 FXR2P51116 673 aaKnown RBP eCLIP14.12□□□□□ -0.157e-13■■□□□ 13.6
HPCAL1-203ENST00000419810 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.8□□□□□ -0.042e-12■□□□□ 10.5
HPCAL1-203ENST00000419810 SUB1P53999 127 aaKnown RBP eCLIP11.9□□□□□ -0.516e-11■□□□□ 11.1
HPCAL1-203ENST00000419810 TBRG4Q969Z0 631 aaKnown RBP eCLIP14.05□□□□□ -0.162e-10■■■■■ 34
HPCAL1-203ENST00000419810 AQRO60306 1485 aaKnown RBP eCLIP16.22■□□□□ 0.193e-10■■■■■ 34.9
HPCAL1-203ENST00000419810 DDX6P26196 483 aaKnown RBP eCLIP12.92□□□□□ -0.341e-9■■■■■ 144.3
HPCAL1-203ENST00000419810 ILF3Q12906 894 aaKnown RBP eCLIP12.79□□□□□ -0.362e-9■□□□□ 9.9
HPCAL1-203ENST00000419810 PABPC4Q13310 644 aaKnown RBP eCLIP14.49□□□□□ -0.097e-9■□□□□ 9.7
HPCAL1-203ENST00000419810 AGGF1Q8N302 714 aaeCLIP14.31□□□□□ -0.121e-8■■■■■ 64.5
HPCAL1-203ENST00000419810 UPF1Q92900 1129 aaKnown RBP eCLIP13.24□□□□□ -0.291e-8■■■■■ 31.7
HPCAL1-203ENST00000419810 TARDBPQ13148 414 aaKnown RBP eCLIP13.11□□□□□ -0.312e-8■■■■■ 34.2
HPCAL1-203ENST00000419810 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.83□□□□□ -0.25e-8■■■■■ 204.6
HPCAL1-203ENST00000419810 LSM11P83369 360 aaKnown RBP eCLIP11.98□□□□□ -0.495e-8■■■■□ 19.3
HPCAL1-203ENST00000419810 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.5■□□□□ 0.399e-8■■■■□ 24.5
HPCAL1-203ENST00000419810 PTBP1P26599 531 aaKnown RBP eCLIP12.59□□□□□ -0.399e-8■■■■■ 27.9
HPCAL1-203ENST00000419810 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.8□□□□□ -0.361e-7■■■■□ 26.4
HPCAL1-203ENST00000419810 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.79□□□□□ -0.21e-7■■■□□ 16.8
HPCAL1-203ENST00000419810 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.21■□□□□ 0.192e-7■■■■■ 375.6
HPCAL1-203ENST00000419810 EFTUD2Q15029 972 aaKnown RBP eCLIP14.13□□□□□ -0.152e-7■■■■■ 31.4
HPCAL1-203ENST00000419810 HNRNPLP14866 589 aaKnown RBP eCLIP13.51□□□□□ -0.252e-7■■■■■ 51.4
HPCAL1-203ENST00000419810 MATR3P43243 847 aaKnown RBP eCLIP15.32■□□□□ 0.043e-7■■■■□ 21.7
HPCAL1-203ENST00000419810 RBFOX2O43251 390 aaKnown RBP eCLIP11.28□□□□□ -0.64e-7■■■■■ 103.3
HPCAL1-203ENST00000419810 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP14.46□□□□□ -0.094e-7■■■■■ 58.1
HPCAL1-203ENST00000419810 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.3■□□□□ 0.044e-7■■■■■ 346.3
HPCAL1-203ENST00000419810 AKAP1Q92667 903 aaKnown RBP eCLIP13.01□□□□□ -0.334e-7■■■■□ 25.5
HPCAL1-203ENST00000419810 YBX3P16989 372 aaKnown RBP eCLIP13.55□□□□□ -0.245e-7■■■■□ 22.1
HPCAL1-203ENST00000419810 QKIQ96PU8 341 aaKnown RBP eCLIP13.42□□□□□ -0.266e-7■■■■■ 42
HPCAL1-203ENST00000419810 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.36□□□□□ -0.276e-7■■■■□ 24
HPCAL1-203ENST00000419810 METAP2P50579 478 aaKnown RBP eCLIP15.36■□□□□ 0.056e-7■■■□□ 17.4
HPCAL1-203ENST00000419810 EIF4G2P78344 907 aaKnown RBP eCLIP17.89■□□□□ 0.457e-7■■■■■ 31
HPCAL1-203ENST00000419810 FTOQ9C0B1 505 aaKnown RBP eCLIP14.81□□□□□ -0.047e-7■■■■■ 34.3
HPCAL1-203ENST00000419810 RBM15Q96T37 977 aaKnown RBP eCLIP14.21□□□□□ -0.139e-7■■■■■ 26.9
HPCAL1-203ENST00000419810 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.33□□□□□ -0.119e-7■■■■■ 27.9
HPCAL1-203ENST00000419810 NONOQ15233 471 aaKnown RBP eCLIP14.83□□□□□ -0.041e-6■■■□□ 16.8
HPCAL1-203ENST00000419810 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.74□□□□□ -0.211e-6■■■■■ 29
HPCAL1-203ENST00000419810 DKC1O60832 514 aaKnown RBP eCLIP14.58□□□□□ -0.081e-6■■■■■ 35.8
HPCAL1-203ENST00000419810 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.78□□□□□ -0.361e-6■■■■■ 38.5
HPCAL1-203ENST00000419810 GTF2F1P35269 517 aaKnown RBP eCLIP15.64■□□□□ 0.091e-6■■■■■ 33.3
HPCAL1-203ENST00000419810 NOLC1Q14978 699 aaKnown RBP eCLIP15.72■□□□□ 0.112e-6■■■■□ 26.1
HPCAL1-203ENST00000419810 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.44□□□□□ -0.262e-6■□□□□ 9.2
HPCAL1-203ENST00000419810 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.87□□□□□ -0.192e-6■■■■■ 29.2
HPCAL1-203ENST00000419810 EIF3DO15371 548 aaKnown RBP eCLIP14.08□□□□□ -0.162e-6■■■■■ 27.7
HPCAL1-203ENST00000419810 CSTF2P33240 577 aaKnown RBP eCLIP13.12□□□□□ -0.312e-6■■■□□ 16.1
HPCAL1-203ENST00000419810 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.41□□□□□ -0.742e-6■■□□□ 13.5
HPCAL1-203ENST00000419810 SRSF7Q16629 238 aaKnown RBP eCLIP11.25□□□□□ -0.612e-6■■■■□ 21.1
HPCAL1-203ENST00000419810 LARP4Q71RC2 724 aaKnown RBP eCLIP12.9□□□□□ -0.342e-6■■■■□ 19.8
HPCAL1-203ENST00000419810 AATFQ9NY61 560 aaKnown RBP eCLIP14.7□□□□□ -0.062e-6■■■■■ 81.7
HPCAL1-203ENST00000419810 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.45□□□□□ -0.13e-6■□□□□ 10.2
HPCAL1-203ENST00000419810 SF3B1O75533 1304 aaKnown RBP eCLIP13.42□□□□□ -0.263e-6■■■■■ 100.5
HPCAL1-203ENST00000419810 CDC40O60508 579 aaKnown RBP eCLIP12.72□□□□□ -0.374e-6■■■■□ 20.6
HPCAL1-203ENST00000419810 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.17□□□□□ -0.35e-6■■■□□ 18.2
HPCAL1-203ENST00000419810 PCBP2Q15366 365 aaKnown RBP eCLIP12.84□□□□□ -0.355e-6■■■■□ 19.7
HPCAL1-203ENST00000419810 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.52□□□□□ -0.096e-6■■■■■ 34.4
HPCAL1-203ENST00000419810 DDX3XO00571 662 aaKnown RBP eCLIP13.92□□□□□ -0.187e-6■□□□□ 9.8
Retrieved 54 of 54 RNA–protein pairs in 12.2 ms