RNA–Protein interactions for RNA: YKL112W

ABF1, Transcript of DNA binding protein with possible chromatin-reorganizing activity, yeastyeast

Gene ABF1, Length 2,196 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ABF1YKL112W YKU70P32807 602 aa5.38□□□□□ -1.55
ABF1YKL112W DSF2P38213 736 aa5.38□□□□□ -1.55
ABF1YKL112W GUA1P38625 525 aaKnown RBP5.38□□□□□ -1.55
ABF1YKL112W APC5Q08683 685 aa5.38□□□□□ -1.55
ABF1YKL112W NOP56Q12460 504 aaKnown RBP RIP-Chip data5.38□□□□□ -1.55not detected
ABF1YKL112W BRF1P29056 596 aa5.37□□□□□ -1.55
ABF1YKL112W YHR218WP38899 603 aa5.37□□□□□ -1.55
ABF1YKL112W MSH4P40965 878 aaPredicted RBP5.37□□□□□ -1.55
ABF1YKL112W OYE2Q03558 400 aaKnown RBP5.37□□□□□ -1.55
ABF1YKL112W PHM6Q05637 104 aa5.37□□□□□ -1.55
ABF1YKL112W HVG1P0CE11 249 aa5.36□□□□□ -1.55
ABF1YKL112W RPN12P32496 274 aa5.36□□□□□ -1.55
ABF1YKL112W GLC3P32775 704 aa5.36□□□□□ -1.55
ABF1YKL112W CBF5P33322 483 aaKnown RBP RIP-Chip data5.36□□□□□ -1.55not detected
ABF1YKL112W BSD2P38356 321 aa5.36□□□□□ -1.55
ABF1YKL112W TGL3P40308 642 aa5.36□□□□□ -1.55
ABF1YKL112W VPS70P47161 811 aa5.36□□□□□ -1.55
ABF1YKL112W TAN1P53072 289 aaPredicted RBP5.36□□□□□ -1.55
ABF1YKL112W ELA1P53861 379 aaPredicted RBP5.36□□□□□ -1.55
ABF1YKL112W TIM11P81449 96 aaPredicted RBP5.36□□□□□ -1.55
ABF1YKL112W AVO1Q08236 1176 aa5.36□□□□□ -1.55
ABF1YKL112W DPS1P04802 557 aaKnown RBP5.36□□□□□ -1.55
ABF1YKL112W LTV1P34078 463 aa5.36□□□□□ -1.55
ABF1YKL112W TFG1P41895 735 aaPredicted RBP5.36□□□□□ -1.55
ABF1YKL112W GRX6Q12438 231 aa5.36□□□□□ -1.55
ABF1YKL112W VMA1P17255 1071 aaKnown RBP5.35□□□□□ -1.55
ABF1YKL112W SIT4P20604 311 aa5.35□□□□□ -1.55
ABF1YKL112W MSH3P25336 1018 aa5.35□□□□□ -1.55
ABF1YKL112W TPS3P38426 1054 aaKnown RBP5.35□□□□□ -1.55
ABF1YKL112W YBP2P53169 641 aa5.35□□□□□ -1.55
ABF1YKL112W SAC3P46674 1301 aa5.35□□□□□ -1.55
ABF1YKL112W SSD1P24276 1250 aaKnown RBP RIP-Chip data5.35□□□□□ -1.55not detected
ABF1YKL112W CDC3P32457 520 aaKnown RBP5.35□□□□□ -1.55
ABF1YKL112W SEC6P32844 805 aa5.35□□□□□ -1.55
ABF1YKL112W STM1P39015 273 aaKnown RBP5.35□□□□□ -1.55
ABF1YKL112W TIM50Q02776 476 aa5.35□□□□□ -1.55
ABF1YKL112W CLN1P20437 546 aa5.34□□□□□ -1.55
ABF1YKL112W TRX2P22803 104 aaKnown RBP5.34□□□□□ -1.55
ABF1YKL112W PPG1P32838 368 aa5.34□□□□□ -1.55
ABF1YKL112W PEX5P35056 612 aa5.34□□□□□ -1.55
ABF1YKL112W FUI1P38196 639 aa5.34□□□□□ -1.55
ABF1YKL112W RPL34AP87262 121 aaPredicted RBP5.34□□□□□ -1.55
ABF1YKL112W CST9Q06032 482 aa5.34□□□□□ -1.55
ABF1YKL112W RRP9Q06506 573 aaKnown RBP5.34□□□□□ -1.55
ABF1YKL112W NFI1Q12216 726 aa5.34□□□□□ -1.55
ABF1YKL112W DBP10Q12389 995 aaKnown RBP5.34□□□□□ -1.55
ABF1YKL112W GRX4P32642 244 aa5.33□□□□□ -1.56
ABF1YKL112W SIC1P38634 284 aa5.33□□□□□ -1.56
ABF1YKL112W YVH1Q02256 364 aaKnown RBP5.33□□□□□ -1.56
ABF1YKL112W RAT1Q02792 1006 aaKnown RBP5.33□□□□□ -1.56
ABF1YKL112W CTI6Q08923 506 aa5.33□□□□□ -1.56
ABF1YKL112W CDC31P06704 161 aaKnown RBP5.33□□□□□ -1.56
ABF1YKL112W LPD1P09624 499 aaKnown RBP5.33□□□□□ -1.56
ABF1YKL112W RPC82P32349 654 aa5.33□□□□□ -1.56
ABF1YKL112W FET4P40988 552 aa5.33□□□□□ -1.56
ABF1YKL112W CWC15Q03772 175 aaKnown RBP5.33□□□□□ -1.56
ABF1YKL112W VTI1Q04338 217 aa5.33□□□□□ -1.56
ABF1YKL112W IRC3Q06683 689 aa5.33□□□□□ -1.56
ABF1YKL112W DIB1Q06819 143 aaPredicted RBP5.33□□□□□ -1.56
ABF1YKL112W NOP14Q99207 810 aaKnown RBP5.33□□□□□ -1.56
ABF1YKL112W SEC3P33332 1336 aaKnown RBP5.32□□□□□ -1.56
ABF1YKL112W TFC3P34111 1160 aa5.32□□□□□ -1.56
ABF1YKL112W MOT2P34909 587 aaKnown RBP5.32□□□□□ -1.56
ABF1YKL112W KEL2P50090 882 aa5.32□□□□□ -1.56
ABF1YKL112W RRP15Q06511 250 aaPredicted RBP5.32□□□□□ -1.56
ABF1YKL112W RUD3Q12234 484 aaKnown RBP5.32□□□□□ -1.56
ABF1YKL112W MAK16P10962 306 aaPredicted RBP5.32□□□□□ -1.56
ABF1YKL112W BYE1P36106 594 aa5.32□□□□□ -1.56
ABF1YKL112W YMR124WP39523 943 aaKnown RBP5.32□□□□□ -1.56
ABF1YKL112W EMP47P43555 445 aa5.32□□□□□ -1.56
ABF1YKL112W BDP1P46678 594 aa5.32□□□□□ -1.56
ABF1YKL112W OCA1P50946 238 aaPredicted RBP5.32□□□□□ -1.56
ABF1YKL112W CTR9P89105 1077 aa5.32□□□□□ -1.56
ABF1YKL112W SPO71Q03868 1245 aa5.32□□□□□ -1.56
ABF1YKL112W UGA3P26370 528 aa5.31□□□□□ -1.56
ABF1YKL112W VPS24P36095 224 aaKnown RBP5.31□□□□□ -1.56
ABF1YKL112W GYP7P48365 746 aa5.31□□□□□ -1.56
ABF1YKL112W RTF1P53064 558 aa5.31□□□□□ -1.56
ABF1YKL112W RRB1Q04225 511 aaKnown RBP5.31□□□□□ -1.56
ABF1YKL112W PUF6Q04373 656 aaKnown RBP5.31□□□□□ -1.56
ABF1YKL112W BDF2Q07442 638 aa5.31□□□□□ -1.56
ABF1YKL112W GAS4Q08271 471 aa5.31□□□□□ -1.56
ABF1YKL112W YOL098CQ12496 1037 aa5.31□□□□□ -1.56
ABF1YKL112W VPS13Q07878 3144 aa5.31□□□□□ -1.56
ABF1YKL112W PDI1P17967 522 aaKnown RBP5.31□□□□□ -1.56
ABF1YKL112W ARC19P33204 171 aaKnown RBP5.31□□□□□ -1.56
ABF1YKL112W RKM3P38222 552 aa5.31□□□□□ -1.56
ABF1YKL112W GLO3P38682 493 aaKnown RBP5.31□□□□□ -1.56
ABF1YKL112W RSC30P38781 883 aa5.31□□□□□ -1.56
ABF1YKL112W EPS1P40557 701 aa5.31□□□□□ -1.56
ABF1YKL112W MTC5Q03897 1148 aa5.31□□□□□ -1.56
ABF1YKL112W SVF1Q05515 481 aa5.31□□□□□ -1.56
ABF1YKL112W CLP1Q08685 445 aaPredicted RBP5.31□□□□□ -1.56
ABF1YKL112W PCL8Q08966 492 aa5.31□□□□□ -1.56
ABF1YKL112W GAP1P19145 602 aaPredicted RBP5.3□□□□□ -1.56
ABF1YKL112W SCT1P32784 759 aa5.3□□□□□ -1.56
ABF1YKL112W SET1P38827 1080 aaKnown RBP5.3□□□□□ -1.56
ABF1YKL112W TIM54P47045 478 aa5.3□□□□□ -1.56
ABF1YKL112W REX2P54964 269 aaKnown RBP5.3□□□□□ -1.56
ABF1YKL112W NUP145P49687 1317 aa5.3□□□□□ -1.56
Retrieved 100 of 5,963 RNA–protein pairs in 14.9 ms