RNA–Protein interactions for RNA: YKL112W

ABF1, Transcript of DNA binding protein with possible chromatin-reorganizing activity, yeastyeast

Gene ABF1, Length 2,196 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ABF1YKL112W MON2P48563 1636 aaPredicted RBP9.57□□□□□ -0.88
ABF1YKL112W INO80P53115 1489 aa9.41□□□□□ -0.9
ABF1YKL112W DNA2P38859 1522 aa9□□□□□ -0.97
ABF1YKL112W KOG1P38873 1557 aa8.89□□□□□ -0.99
ABF1YKL112W SWR1Q05471 1514 aa8.89□□□□□ -0.99
ABF1YKL112W RSE1Q04693 1361 aaKnown RBP8.78□□□□□ -1
ABF1YKL112W TY1B-DR4Q07793 1604 aa8.73□□□□□ -1.01
ABF1YKL112W TCB3Q03640 1545 aaKnown RBP8.65□□□□□ -1.03
ABF1YKL112W SPA2P23201 1466 aaKnown RBP8.44□□□□□ -1.06
ABF1YKL112W HSL1P34244 1518 aa8.25□□□□□ -1.09
ABF1YKL112W SPT6P23615 1451 aaKnown RBP8.22□□□□□ -1.09
ABF1YKL112W THO2P53552 1597 aaKnown RBP8.19□□□□□ -1.1
ABF1YKL112W ECM5Q03214 1411 aa8.16□□□□□ -1.1
ABF1YKL112W RQC2Q12532 1038 aaKnown RBP8.14□□□□□ -1.11
ABF1YKL112W SGS1P35187 1447 aa8.13□□□□□ -1.11
ABF1YKL112W MTC1P47018 478 aaKnown RBP8.11□□□□□ -1.11
ABF1YKL112W BUD4P47136 1447 aa8.1□□□□□ -1.11
ABF1YKL112W MDS3P53094 1487 aa8.07□□□□□ -1.12
ABF1YKL112W REV3P14284 1504 aa8.06□□□□□ -1.12
ABF1YKL112W HIR3P47171 1648 aa8.04□□□□□ -1.12
ABF1YKL112W PEP1P32319 1579 aa8□□□□□ -1.13
ABF1YKL112W BPT1P14772 1559 aa7.91□□□□□ -1.14
ABF1YKL112W ATG2P53855 1592 aa7.87□□□□□ -1.15
ABF1YKL112W MIF2P35201 549 aa7.85□□□□□ -1.15
ABF1YKL112W SSK2P53599 1579 aa7.78□□□□□ -1.16
ABF1YKL112W XRN1P22147 1528 aaKnown RBP7.77□□□□□ -1.17
ABF1YKL112W YCF1P39109 1515 aaKnown RBP7.76□□□□□ -1.17
ABF1YKL112W DRS1P32892 752 aaKnown RBP7.76□□□□□ -1.17
ABF1YKL112W MYO2P19524 1574 aaKnown RBP7.67□□□□□ -1.18
ABF1YKL112W TAF7Q05021 590 aa7.65□□□□□ -1.18
ABF1YKL112W BNI1P41832 1953 aa7.62□□□□□ -1.19
ABF1YKL112W SIN3P22579 1536 aa7.62□□□□□ -1.19
ABF1YKL112W MET5P47169 1442 aa7.61□□□□□ -1.19
ABF1YKL112W LTE1P07866 1435 aa7.57□□□□□ -1.2
ABF1YKL112W TFA1P36100 482 aa7.57□□□□□ -1.2
ABF1YKL112W CDC25P04821 1589 aa7.56□□□□□ -1.2
ABF1YKL112W RPA190P10964 1664 aaKnown RBP7.56□□□□□ -1.2
ABF1YKL112W TAF2P23255 1407 aa7.56□□□□□ -1.2
ABF1YKL112W ESC1Q03661 1658 aaKnown RBP7.55□□□□□ -1.2
ABF1YKL112W BFR2Q06631 534 aaKnown RBP7.52□□□□□ -1.21
ABF1YKL112W SKI3P17883 1432 aaKnown RBP7.52□□□□□ -1.21
ABF1YKL112W ESP1Q03018 1630 aa7.51□□□□□ -1.21
ABF1YKL112W YFR006WP43590 535 aa7.51□□□□□ -1.21
ABF1YKL112W TY1B-BRQ12193 1756 aa7.49□□□□□ -1.21
ABF1YKL112W TY1B-GR3Q12316 1755 aa7.49□□□□□ -1.21
ABF1YKL112W TY1B-ORQ92393 1755 aa7.49□□□□□ -1.21
ABF1YKL112W DNF1P32660 1571 aa7.48□□□□□ -1.21
ABF1YKL112W RKR1Q04781 1562 aa7.48□□□□□ -1.21
ABF1YKL112W UFD4P33202 1483 aa7.47□□□□□ -1.21
ABF1YKL112W IRC20Q06554 1556 aa7.46□□□□□ -1.22
ABF1YKL112W TY2B-LR1P0C2J3 1770 aa7.45□□□□□ -1.22
ABF1YKL112W TY2B-FP0CX63 1770 aa7.45□□□□□ -1.22
ABF1YKL112W TY2B-GR2P0CX64 1770 aa7.45□□□□□ -1.22
ABF1YKL112W TY2B-CP25384 1770 aa7.45□□□□□ -1.22
ABF1YKL112W TY2B-DR2Q03494 1770 aa7.45□□□□□ -1.22
ABF1YKL112W TY1B-DR1Q03855 1755 aa7.45□□□□□ -1.22
ABF1YKL112W TY2B-DR3Q07791 1770 aaKnown RBP7.45□□□□□ -1.22
ABF1YKL112W TY2B-OR1Q12113 1770 aa7.45□□□□□ -1.22
ABF1YKL112W TY2B-DR1Q12472 1770 aa7.45□□□□□ -1.22
ABF1YKL112W TY2B-OR2Q12501 1770 aa7.45□□□□□ -1.22
ABF1YKL112W CHD1P32657 1468 aa7.44□□□□□ -1.22
ABF1YKL112W GEA2P39993 1459 aaKnown RBP7.43□□□□□ -1.22
ABF1YKL112W RPO31P04051 1460 aa7.41□□□□□ -1.22
ABF1YKL112W SCC2Q04002 1493 aa7.41□□□□□ -1.22
ABF1YKL112W YPK9Q12697 1472 aa7.38□□□□□ -1.23
ABF1YKL112W TY1B-HO13535 1793 aa7.38□□□□□ -1.23
ABF1YKL112W TY1B-DR5P0C2I2 1755 aa7.38□□□□□ -1.23
ABF1YKL112W TY1B-DR6P0C2I3 1755 aa7.38□□□□□ -1.23
ABF1YKL112W TY1B-LR2P0C2I5 1755 aa7.38□□□□□ -1.23
ABF1YKL112W TY1B-LR3P0C2I6 1755 aaKnown RBP7.38□□□□□ -1.23
ABF1YKL112W TY1B-PR1P0C2I9 1755 aaKnown RBP7.38□□□□□ -1.23
ABF1YKL112W TY1B-PR2P0C2J0 1756 aa7.38□□□□□ -1.23
ABF1YKL112W TY1B-PR3P0C2J1 1755 aaKnown RBP7.38□□□□□ -1.23
ABF1YKL112W TY1B-JR1P47098 1755 aa7.38□□□□□ -1.23
ABF1YKL112W TY1B-ML2Q03434 1755 aaKnown RBP7.38□□□□□ -1.23
ABF1YKL112W TY1B-ER1Q03612 1755 aa7.38□□□□□ -1.23
ABF1YKL112W TY1B-ML1Q04711 1755 aaKnown RBP7.38□□□□□ -1.23
ABF1YKL112W TY1B-GR2Q12269 1755 aa7.38□□□□□ -1.23
ABF1YKL112W TY1B-OLQ12273 1755 aa7.38□□□□□ -1.23
ABF1YKL112W TY1B-PLQ12414 1755 aaKnown RBP7.38□□□□□ -1.23
ABF1YKL112W ABP1P15891 592 aaKnown RBP7.36□□□□□ -1.23
ABF1YKL112W PAN1P32521 1480 aa7.36□□□□□ -1.23
ABF1YKL112W ITT1Q04638 464 aa7.35□□□□□ -1.23
ABF1YKL112W TY2B-BQ12491 1770 aa7.34□□□□□ -1.23
ABF1YKL112W MMS1Q06211 1407 aa7.33□□□□□ -1.24
ABF1YKL112W YRF1-1P0CX20 1796 aa7.32□□□□□ -1.24
ABF1YKL112W YRF1-5P0CX21 1796 aa7.32□□□□□ -1.24
ABF1YKL112W YRF1-8P0CX22 1796 aa7.32□□□□□ -1.24
ABF1YKL112W SSN2P38931 1420 aa7.3□□□□□ -1.24
ABF1YKL112W DNF2Q12675 1612 aa7.29□□□□□ -1.24
ABF1YKL112W TY1B-DR3Q99231 1755 aa7.28□□□□□ -1.24
ABF1YKL112W DRS2P39524 1355 aa7.22□□□□□ -1.25
ABF1YKL112W TY1B-JR2P47100 1755 aaKnown RBP7.2□□□□□ -1.26
ABF1YKL112W TY1B-ER2Q03619 1755 aa7.2□□□□□ -1.26
ABF1YKL112W TY1B-MR1Q04214 1755 aa7.2□□□□□ -1.26
ABF1YKL112W TY1B-MR2Q04670 1755 aaKnown RBP7.2□□□□□ -1.26
ABF1YKL112W TY1B-LR1Q12088 1755 aaKnown RBP7.2□□□□□ -1.26
ABF1YKL112W TY1B-NL1Q12112 1755 aa7.2□□□□□ -1.26
ABF1YKL112W TY1B-GR1Q12141 1755 aa7.2□□□□□ -1.26
ABF1YKL112W TY1B-BLQ12490 1755 aa7.2□□□□□ -1.26
Retrieved 100 of 5,963 RNA–protein pairs in 49.3 ms