Protein–RNA interactions for Protein: P32807

YKU70, ATP-dependent DNA helicase II subunit 1, yeastyeast

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
YKU70P32807 YML009W-BYML009W-B 477 nt24.87■■□□□ 1.57
YKU70P32807 NOP1YDL014W 984 nt24.46■■□□□ 1.51
YKU70P32807 NSR1YGR159C 1245 nt24.2■■□□□ 1.46
YKU70P32807 YKL036CYKL036C 393 nt23.14■■□□□ 1.29
YKU70P32807 YJL027CYJL027C 417 nt21.73■■□□□ 1.07
YKU70P32807 Q0297Q0297 156 nt21.6■■□□□ 1.05
YKU70P32807 SRX1YKL086W 384 nt21.36■■□□□ 1.01
YKU70P32807 SCS3YGL126W 1143 nt21.35■■□□□ 1.01
YKU70P32807 MDJ1YFL016C 1536 nt20.85■□□□□ 0.93
YKU70P32807 YCR051WYCR051W 669 nt20.34■□□□□ 0.85
YKU70P32807 YOL085CYOL085C 342 nt20.03■□□□□ 0.8
YKU70P32807 SCJ1YMR214W 1134 nt19.72■□□□□ 0.75
YKU70P32807 PKP1YIL042C 1185 nt19.65■□□□□ 0.74
YKU70P32807 RPP1BYDL130W 321 nt19.39■□□□□ 0.69
YKU70P32807 ATS1YAL020C 1002 nt19.31■□□□□ 0.68
YKU70P32807 TRN1tP(UGG)A 72 nt18.91■□□□□ 0.62
YKU70P32807 SUF9tP(UGG)F 72 nt18.91■□□□□ 0.62
YKU70P32807 SUF8tP(UGG)H 72 nt18.91■□□□□ 0.62
YKU70P32807 tP(UGG)LtP(UGG)L 72 nt18.91■□□□□ 0.62
YKU70P32807 SUF7tP(UGG)M 72 nt18.91■□□□□ 0.62
YKU70P32807 tP(UGG)N1tP(UGG)N1 72 nt18.91■□□□□ 0.62
YKU70P32807 tP(UGG)N2tP(UGG)N2 72 nt18.91■□□□□ 0.62
YKU70P32807 tP(UGG)O1tP(UGG)O1 72 nt18.91■□□□□ 0.62
YKU70P32807 SUF11tP(UGG)O2 72 nt18.91■□□□□ 0.62
YKU70P32807 CCC1YLR220W 969 nt18.79■□□□□ 0.6
YKU70P32807 DBP2YNL112W 1641 nt18.71■□□□□ 0.58
YKU70P32807 SCR1SCR1 522 nt18.44■□□□□ 0.54
YKU70P32807 PET122YER153C 765 nt18.43■□□□□ 0.54
YKU70P32807 tP(UGG)O3tP(UGG)O3 72 nt18.13■□□□□ 0.49
YKU70P32807 RRN5YLR141W 1092 nt18■□□□□ 0.47
YKU70P32807 RTC3YHR087W 336 nt17.94■□□□□ 0.46
YKU70P32807 RSB1YOR049C 1065 nt17.81■□□□□ 0.44
YKU70P32807 PST2YDR032C 597 nt17.78■□□□□ 0.44
YKU70P32807 RVS167YDR388W 1449 nt17.76■□□□□ 0.43
YKU70P32807 YER088W-BYER088W-B 147 nt17.64■□□□□ 0.41
YKU70P32807 YBR190WYBR190W 312 nt17.64■□□□□ 0.41
YKU70P32807 YDJ1YNL064C 1230 nt17.53■□□□□ 0.4
YKU70P32807 YKL097CYKL097C 411 nt17.39■□□□□ 0.37
YKU70P32807 SHR5YOL110W 714 nt17.27■□□□□ 0.36
YKU70P32807 GAR1YHR089C 618 nt17.06■□□□□ 0.32
YKU70P32807 SHU1YHL006C 453 nt16.89■□□□□ 0.29
YKU70P32807 DEP1YAL013W 1218 nt16.6■□□□□ 0.25
YKU70P32807 YOR139CYOR139C 393 nt16.57■□□□□ 0.24
YKU70P32807 YAL037C-BYAL037C-B 975 nt16.47■□□□□ 0.23
YKU70P32807 TIR1YER011W 765 nt16.45■□□□□ 0.22
YKU70P32807 URN1YPR152C 1398 nt16.41■□□□□ 0.22
YKU70P32807 YNL208WYNL208W 600 nt16.4■□□□□ 0.22
YKU70P32807 RPN10YHR200W 807 nt16.32■□□□□ 0.2
YKU70P32807 NPL3YDR432W 1245 nt16.31■□□□□ 0.2
YKU70P32807 SSA1YAL005C 1929 nt16.11■□□□□ 0.17
YKU70P32807 OPI9YLR338W 858 nt16.05■□□□□ 0.16
YKU70P32807 SRB2YHR041C 633 nt15.94■□□□□ 0.14
YKU70P32807 YGR021WYGR021W 873 nt15.92■□□□□ 0.14
YKU70P32807 tM(CAU)CtM(CAU)C 72 nt15.9■□□□□ 0.14
YKU70P32807 IMT4tM(CAU)E 72 nt15.9■□□□□ 0.14
YKU70P32807 IMT3tM(CAU)J3 72 nt15.9■□□□□ 0.14
YKU70P32807 IMT1tM(CAU)O1 72 nt15.9■□□□□ 0.14
YKU70P32807 IMT2tM(CAU)P 72 nt15.9■□□□□ 0.14
YKU70P32807 MNP1YGL068W 585 nt15.89■□□□□ 0.13
YKU70P32807 HOM6YJR139C 1080 nt15.89■□□□□ 0.13
YKU70P32807 YOL037CYOL037C 354 nt15.88■□□□□ 0.13
YKU70P32807 WWM1YFL010C 636 nt15.83■□□□□ 0.12
YKU70P32807 SAH1YER043C 1350 nt15.78■□□□□ 0.12
YKU70P32807 YJR018WYJR018W 363 nt15.71■□□□□ 0.11
YKU70P32807 RKM5YLR137W 1104 nt15.66■□□□□ 0.1
YKU70P32807 PUT4YOR348C 1884 nt15.59■□□□□ 0.09
YKU70P32807 PUN1YLR414C 792 nt15.58■□□□□ 0.08
YKU70P32807 PUS2YGL063W 1113 nt15.57■□□□□ 0.08
YKU70P32807 RPP2BYDR382W 333 nt15.56■□□□□ 0.08
YKU70P32807 YFL021C-AYFL021C-A 855 nt15.55■□□□□ 0.08
YKU70P32807 YJR120WYJR120W 351 nt15.54■□□□□ 0.08
YKU70P32807 MOT3YMR070W 1473 nt15.51■□□□□ 0.07
YKU70P32807 YLR281CYLR281C 468 nt15.5■□□□□ 0.07
YKU70P32807 ARE1YCR048W 1833 nt15.45■□□□□ 0.06
YKU70P32807 BSC6YOL137W 1494 nt15.41■□□□□ 0.06
YKU70P32807 WHI5YOR083W 888 nt15.36■□□□□ 0.05
YKU70P32807 SSA3YBL075C 1950 nt15.36■□□□□ 0.05
YKU70P32807 BDH2YAL061W 1254 nt15.35■□□□□ 0.05
YKU70P32807 PTC2YER089C 1395 nt15.29■□□□□ 0.04
YKU70P32807 LSM3YLR438C-A 270 nt15.29■□□□□ 0.04
YKU70P32807 YHR049C-AYHR049C-A 297 nt15.23■□□□□ 0.03
YKU70P32807 POA1YBR022W 534 nt15.19■□□□□ 0.02
YKU70P32807 FMP45YDL222C 930 nt15.15■□□□□ 0.02
YKU70P32807 MRPL8YJL063C 717 nt15.14■□□□□ 0.01
YKU70P32807 YPR011CYPR011C 981 nt15.11■□□□□ 0.01
YKU70P32807 INM2YDR287W 879 nt15.09■□□□□ 0.01
YKU70P32807 DSK2YMR276W 1122 nt15.08■□□□□ 0
YKU70P32807 YCH1YGR203W 447 nt15.05■□□□□ -0
YKU70P32807 IMP2'YIL154C 1041 nt15.01□□□□□ -0.01
YKU70P32807 YBL100CYBL100C 315 nt15.01□□□□□ -0.01
YKU70P32807 NAB2YGL122C 1578 nt15□□□□□ -0.01
YKU70P32807 TRM9YML014W 840 nt14.99□□□□□ -0.01
YKU70P32807 YLR236CYLR236C 324 nt14.98□□□□□ -0.01
YKU70P32807 BUD23YCR047C 828 nt14.96□□□□□ -0.01
YKU70P32807 FPR4YLR449W 1179 nt14.93□□□□□ -0.02
YKU70P32807 DAL1YIR027C 1383 nt14.92□□□□□ -0.02
YKU70P32807 ADO1YJR105W 1023 nt14.9□□□□□ -0.02
YKU70P32807 YLR154C-GYLR154C-G 150 nt14.9□□□□□ -0.02
YKU70P32807 FUN26YAL022C 1554 nt14.86□□□□□ -0.03
YKU70P32807 UBX6YJL048C 1191 nt14.84□□□□□ -0.03
Retrieved 100 of 7,029 protein–RNA pairs in 12.9 ms