RNA–Protein interactions for RNA: YJR104C

SOD1, Transcript of Cytosolic copper-zinc superoxide dismutase, yeastyeast

Gene SOD1, Length 465 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SOD1YJR104C RTC1Q08281 1341 aa4.4□□□□□ -1.71
SOD1YJR104C TRP5P00931 707 aaKnown RBP4.39□□□□□ -1.71
SOD1YJR104C RPS24AP0CX31 135 aaKnown RBP4.39□□□□□ -1.71
SOD1YJR104C RPS24BP0CX32 135 aaKnown RBP4.39□□□□□ -1.71
SOD1YJR104C HPR1P17629 752 aaKnown RBP4.39□□□□□ -1.71
SOD1YJR104C CLB5P30283 435 aa4.39□□□□□ -1.71
SOD1YJR104C AFG2P32794 780 aa4.39□□□□□ -1.71
SOD1YJR104C ASH1P34233 588 aa4.39□□□□□ -1.71
SOD1YJR104C CSE4P36012 229 aa4.39□□□□□ -1.71
SOD1YJR104C PTC4P38089 393 aa4.39□□□□□ -1.71
SOD1YJR104C FPR3P38911 411 aaKnown RBP4.39□□□□□ -1.71
SOD1YJR104C UBP9P39967 754 aa4.39□□□□□ -1.71
SOD1YJR104C PSF2P40359 213 aa4.39□□□□□ -1.71
SOD1YJR104C DAN4P47179 1161 aa4.39□□□□□ -1.71
SOD1YJR104C VPS4P52917 437 aa4.39□□□□□ -1.71
SOD1YJR104C DPL1Q05567 589 aa4.39□□□□□ -1.71
SOD1YJR104C SIT4P20604 311 aa4.38□□□□□ -1.71
SOD1YJR104C RIX1P38883 763 aaPredicted RBP4.38□□□□□ -1.71
SOD1YJR104C ILV3P39522 585 aaKnown RBP4.38□□□□□ -1.71
SOD1YJR104C YFL040WP43562 540 aa4.38□□□□□ -1.71
SOD1YJR104C ULI1P43604 169 aa4.38□□□□□ -1.71
SOD1YJR104C CSN12P47130 423 aa4.38□□□□□ -1.71
SOD1YJR104C YRB30P53107 440 aaPredicted RBP4.38□□□□□ -1.71
SOD1YJR104C SPP1Q03012 353 aa4.38□□□□□ -1.71
SOD1YJR104C JIP4Q03361 876 aa4.38□□□□□ -1.71
SOD1YJR104C TAF8Q03750 510 aa4.38□□□□□ -1.71
SOD1YJR104C TIF11P38912 153 aaKnown RBP4.37□□□□□ -1.71
SOD1YJR104C VNX1P42839 908 aa4.37□□□□□ -1.71
SOD1YJR104C YGR130CP53278 816 aa4.37□□□□□ -1.71
SOD1YJR104C CWC22P53333 577 aaKnown RBP4.37□□□□□ -1.71
SOD1YJR104C TFB3Q03290 321 aa4.37□□□□□ -1.71
SOD1YJR104C CSC1Q06538 782 aa4.37□□□□□ -1.71
SOD1YJR104C IRC3Q06683 689 aa4.37□□□□□ -1.71
SOD1YJR104C GCN1P33892 2672 aaKnown RBP4.36□□□□□ -1.71
SOD1YJR104C CAF20P12962 161 aaKnown RBP4.36□□□□□ -1.71
SOD1YJR104C RGR1P19263 1082 aa4.36□□□□□ -1.71
SOD1YJR104C STV1P37296 890 aa4.36□□□□□ -1.71
SOD1YJR104C MVP1P40959 511 aaKnown RBP4.36□□□□□ -1.71
SOD1YJR104C LPD1P09624 499 aaKnown RBP4.35□□□□□ -1.71
SOD1YJR104C OSM1P21375 501 aaKnown RBP4.35□□□□□ -1.71
SOD1YJR104C DEF1P35732 738 aaKnown RBP4.35□□□□□ -1.71
SOD1YJR104C MSC7P38694 644 aa4.35□□□□□ -1.71
SOD1YJR104C NUG1P40010 520 aaKnown RBP4.35□□□□□ -1.71
SOD1YJR104C SPR3P41901 512 aa4.35□□□□□ -1.71
SOD1YJR104C YPL034WQ03083 165 aa4.35□□□□□ -1.71
SOD1YJR104C BDF2Q07442 638 aa4.35□□□□□ -1.71
SOD1YJR104C HIP1P06775 603 aa4.34□□□□□ -1.71
SOD1YJR104C MTR4P47047 1073 aaKnown RBP4.34□□□□□ -1.71
SOD1YJR104C TFB4Q12004 338 aa4.34□□□□□ -1.71
SOD1YJR104C DAP1Q12091 152 aa4.34□□□□□ -1.71
SOD1YJR104C GSC2P40989 1895 aa4.33□□□□□ -1.72
SOD1YJR104C OPY1P38271 328 aa4.33□□□□□ -1.72
SOD1YJR104C SNF7P39929 240 aaKnown RBP4.33□□□□□ -1.72
SOD1YJR104C TFG1P41895 735 aaPredicted RBP4.33□□□□□ -1.72
SOD1YJR104C KRI1P42846 591 aaKnown RBP4.33□□□□□ -1.72
SOD1YJR104C YNL035CP53962 389 aaKnown RBP4.33□□□□□ -1.72
SOD1YJR104C PEX29Q03370 554 aa4.33□□□□□ -1.72
SOD1YJR104C YPR109WQ06104 294 aa4.33□□□□□ -1.72
SOD1YJR104C CDC73Q06697 393 aa4.33□□□□□ -1.72
SOD1YJR104C STB3Q12427 513 aa4.33□□□□□ -1.72
SOD1YJR104C SSM4P40318 1319 aa4.32□□□□□ -1.72
SOD1YJR104C RNA1P11745 407 aaKnown RBP4.32□□□□□ -1.72
SOD1YJR104C VID30P53076 958 aa4.32□□□□□ -1.72
SOD1YJR104C RAT1Q02792 1006 aaKnown RBP4.32□□□□□ -1.72
SOD1YJR104C FMP30Q02883 468 aa4.32□□□□□ -1.72
SOD1YJR104C PML39Q03760 334 aa4.32□□□□□ -1.72
SOD1YJR104C PMD1P32634 1753 aa4.32□□□□□ -1.72
SOD1YJR104C LEU2P04173 364 aaPredicted RBP4.31□□□□□ -1.72
SOD1YJR104C RPL40AP0CH08 128 aaKnown RBP4.31□□□□□ -1.72
SOD1YJR104C RPL40BP0CH09 128 aaKnown RBP4.31□□□□□ -1.72
SOD1YJR104C RPC31P17890 251 aa4.31□□□□□ -1.72
SOD1YJR104C IXR1P33417 597 aa4.31□□□□□ -1.72
SOD1YJR104C NIS1P53939 407 aa4.31□□□□□ -1.72
SOD1YJR104C MAP1Q01662 387 aaKnown RBP RIP-Chip data4.31□□□□□ -1.72not detected
SOD1YJR104C FPR4Q06205 392 aaPredicted RBP4.31□□□□□ -1.72
SOD1YJR104C IRA2P19158 3079 aa4.3□□□□□ -1.72
SOD1YJR104C PKC1P24583 1151 aa4.3□□□□□ -1.72
SOD1YJR104C RTG1P32607 177 aa4.3□□□□□ -1.72
SOD1YJR104C PAF1P38351 445 aa4.3□□□□□ -1.72
SOD1YJR104C RPL34BP40525 121 aaKnown RBP4.3□□□□□ -1.72
SOD1YJR104C YJL007CP47080 104 aa4.3□□□□□ -1.72
SOD1YJR104C YBP2P53169 641 aa4.3□□□□□ -1.72
SOD1YJR104C ZDS2P54786 942 aa4.3□□□□□ -1.72
SOD1YJR104C INP54Q08227 384 aaKnown RBP4.3□□□□□ -1.72
SOD1YJR104C IOC2Q12072 812 aa4.3□□□□□ -1.72
SOD1YJR104C MMP1Q12372 583 aa4.3□□□□□ -1.72
SOD1YJR104C LDB19Q12502 818 aa4.3□□□□□ -1.72
SOD1YJR104C FLO1P32768 1537 aa4.3□□□□□ -1.72
SOD1YJR104C IRA1P18963 3092 aa4.29□□□□□ -1.72
SOD1YJR104C HSP104P31539 908 aaKnown RBP4.29□□□□□ -1.72
SOD1YJR104C YBL036CP38197 257 aa4.29□□□□□ -1.72
SOD1YJR104C FUN12P39730 1002 aaKnown RBP4.29□□□□□ -1.72
SOD1YJR104C MID1P41821 548 aa4.29□□□□□ -1.72
SOD1YJR104C ENV11P53246 860 aa4.29□□□□□ -1.72
SOD1YJR104C HST2P53686 357 aa4.29□□□□□ -1.72
SOD1YJR104C PKH3Q03306 898 aaPredicted RBP4.29□□□□□ -1.72
SOD1YJR104C CRF1Q04930 467 aa4.29□□□□□ -1.72
SOD1YJR104C MPC54Q08550 464 aa4.29□□□□□ -1.72
SOD1YJR104C KTR1P27810 393 aaKnown RBP4.28□□□□□ -1.72
SOD1YJR104C SEC61P32915 480 aa4.28□□□□□ -1.72
Retrieved 100 of 5,963 RNA–protein pairs in 45.8 ms