Protein–RNA interactions for Protein: P43562

YFL040W, Probable metabolite transport protein YFL040W, yeastyeast

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
YFL040WP43562 YML009W-BYML009W-B 477 nt22.49■■□□□ 1.19
YFL040WP43562 NOP1YDL014W 984 nt22.24■■□□□ 1.15
YFL040WP43562 NSR1YGR159C 1245 nt21.72■■□□□ 1.07
YFL040WP43562 YKL036CYKL036C 393 nt21.11■□□□□ 0.97
YFL040WP43562 YJL027CYJL027C 417 nt19.86■□□□□ 0.77
YFL040WP43562 Q0297Q0297 156 nt19.58■□□□□ 0.72
YFL040WP43562 SCS3YGL126W 1143 nt19.5■□□□□ 0.71
YFL040WP43562 SRX1YKL086W 384 nt19.33■□□□□ 0.68
YFL040WP43562 MDJ1YFL016C 1536 nt18.53■□□□□ 0.56
YFL040WP43562 YCR051WYCR051W 669 nt18.46■□□□□ 0.55
YFL040WP43562 SCJ1YMR214W 1134 nt18.26■□□□□ 0.51
YFL040WP43562 YOL085CYOL085C 342 nt18.2■□□□□ 0.5
YFL040WP43562 PKP1YIL042C 1185 nt17.85■□□□□ 0.45
YFL040WP43562 ATS1YAL020C 1002 nt17.66■□□□□ 0.42
YFL040WP43562 RPP1BYDL130W 321 nt17.59■□□□□ 0.41
YFL040WP43562 TRN1tP(UGG)A 72 nt17.01■□□□□ 0.31
YFL040WP43562 SUF9tP(UGG)F 72 nt17.01■□□□□ 0.31
YFL040WP43562 SUF8tP(UGG)H 72 nt17.01■□□□□ 0.31
YFL040WP43562 tP(UGG)LtP(UGG)L 72 nt17.01■□□□□ 0.31
YFL040WP43562 SUF7tP(UGG)M 72 nt17.01■□□□□ 0.31
YFL040WP43562 tP(UGG)N1tP(UGG)N1 72 nt17.01■□□□□ 0.31
YFL040WP43562 tP(UGG)N2tP(UGG)N2 72 nt17.01■□□□□ 0.31
YFL040WP43562 tP(UGG)O1tP(UGG)O1 72 nt17.01■□□□□ 0.31
YFL040WP43562 SUF11tP(UGG)O2 72 nt17.01■□□□□ 0.31
YFL040WP43562 CCC1YLR220W 969 nt16.93■□□□□ 0.3
YFL040WP43562 SCR1SCR1 522 nt16.86■□□□□ 0.29
YFL040WP43562 PET122YER153C 765 nt16.67■□□□□ 0.26
YFL040WP43562 DBP2YNL112W 1641 nt16.59■□□□□ 0.25
YFL040WP43562 RTC3YHR087W 336 nt16.57■□□□□ 0.24
YFL040WP43562 tP(UGG)O3tP(UGG)O3 72 nt16.37■□□□□ 0.21
YFL040WP43562 RRN5YLR141W 1092 nt16.29■□□□□ 0.2
YFL040WP43562 RSB1YOR049C 1065 nt16.24■□□□□ 0.19
YFL040WP43562 PST2YDR032C 597 nt16.2■□□□□ 0.18
YFL040WP43562 YKL097CYKL097C 411 nt16.04■□□□□ 0.16
YFL040WP43562 RVS167YDR388W 1449 nt16.03■□□□□ 0.16
YFL040WP43562 YER088W-BYER088W-B 147 nt15.96■□□□□ 0.15
YFL040WP43562 YDJ1YNL064C 1230 nt15.83■□□□□ 0.12
YFL040WP43562 YBR190WYBR190W 312 nt15.67■□□□□ 0.1
YFL040WP43562 SHR5YOL110W 714 nt15.54■□□□□ 0.08
YFL040WP43562 GAR1YHR089C 618 nt15.38■□□□□ 0.05
YFL040WP43562 SHU1YHL006C 453 nt15.36■□□□□ 0.05
YFL040WP43562 YOR139CYOR139C 393 nt15.11■□□□□ 0.01
YFL040WP43562 NPL3YDR432W 1245 nt15.01□□□□□ -0.01
YFL040WP43562 YAL037C-BYAL037C-B 975 nt14.91□□□□□ -0.02
YFL040WP43562 DEP1YAL013W 1218 nt14.83□□□□□ -0.04
YFL040WP43562 TIR1YER011W 765 nt14.82□□□□□ -0.04
YFL040WP43562 YNL208WYNL208W 600 nt14.74□□□□□ -0.05
YFL040WP43562 RPN10YHR200W 807 nt14.73□□□□□ -0.05
YFL040WP43562 URN1YPR152C 1398 nt14.65□□□□□ -0.06
YFL040WP43562 YOL037CYOL037C 354 nt14.54□□□□□ -0.08
YFL040WP43562 tM(CAU)CtM(CAU)C 72 nt14.51□□□□□ -0.09
YFL040WP43562 IMT4tM(CAU)E 72 nt14.51□□□□□ -0.09
YFL040WP43562 IMT3tM(CAU)J3 72 nt14.51□□□□□ -0.09
YFL040WP43562 IMT1tM(CAU)O1 72 nt14.51□□□□□ -0.09
YFL040WP43562 IMT2tM(CAU)P 72 nt14.51□□□□□ -0.09
YFL040WP43562 YGR021WYGR021W 873 nt14.49□□□□□ -0.09
YFL040WP43562 BSC6YOL137W 1494 nt14.45□□□□□ -0.1
YFL040WP43562 SSA1YAL005C 1929 nt14.41□□□□□ -0.1
YFL040WP43562 MNP1YGL068W 585 nt14.38□□□□□ -0.11
YFL040WP43562 HOM6YJR139C 1080 nt14.37□□□□□ -0.11
YFL040WP43562 PUT4YOR348C 1884 nt14.37□□□□□ -0.11
YFL040WP43562 OPI9YLR338W 858 nt14.27□□□□□ -0.13
YFL040WP43562 MOT3YMR070W 1473 nt14.26□□□□□ -0.13
YFL040WP43562 WWM1YFL010C 636 nt14.25□□□□□ -0.13
YFL040WP43562 PUS2YGL063W 1113 nt14.22□□□□□ -0.13
YFL040WP43562 RKM5YLR137W 1104 nt14.19□□□□□ -0.14
YFL040WP43562 SRB2YHR041C 633 nt14.17□□□□□ -0.14
YFL040WP43562 SSA3YBL075C 1950 nt14.14□□□□□ -0.15
YFL040WP43562 YLR281CYLR281C 468 nt14.08□□□□□ -0.16
YFL040WP43562 YFL021C-AYFL021C-A 855 nt14.07□□□□□ -0.16
YFL040WP43562 RPP2BYDR382W 333 nt14.06□□□□□ -0.16
YFL040WP43562 YJR018WYJR018W 363 nt14.04□□□□□ -0.16
YFL040WP43562 ARE1YCR048W 1833 nt14.02□□□□□ -0.16
YFL040WP43562 MRPL8YJL063C 717 nt14.01□□□□□ -0.17
YFL040WP43562 SAH1YER043C 1350 nt13.97□□□□□ -0.17
YFL040WP43562 WHI5YOR083W 888 nt13.94□□□□□ -0.18
YFL040WP43562 PUN1YLR414C 792 nt13.93□□□□□ -0.18
YFL040WP43562 FMP45YDL222C 930 nt13.86□□□□□ -0.19
YFL040WP43562 ADO1YJR105W 1023 nt13.82□□□□□ -0.2
YFL040WP43562 POA1YBR022W 534 nt13.82□□□□□ -0.2
YFL040WP43562 BDH2YAL061W 1254 nt13.79□□□□□ -0.2
YFL040WP43562 YCH1YGR203W 447 nt13.78□□□□□ -0.2
YFL040WP43562 YJR120WYJR120W 351 nt13.78□□□□□ -0.2
YFL040WP43562 LSM3YLR438C-A 270 nt13.78□□□□□ -0.2
YFL040WP43562 YHR049C-AYHR049C-A 297 nt13.76□□□□□ -0.21
YFL040WP43562 DSK2YMR276W 1122 nt13.75□□□□□ -0.21
YFL040WP43562 IMP2'YIL154C 1041 nt13.74□□□□□ -0.21
YFL040WP43562 UBX6YJL048C 1191 nt13.68□□□□□ -0.22
YFL040WP43562 YEL076C-AYEL076C-A 651 nt13.59□□□□□ -0.23
YFL040WP43562 YEL076CYEL076C 651 nt13.59□□□□□ -0.23
YFL040WP43562 YLR464WYLR464W 651 nt13.59□□□□□ -0.23
YFL040WP43562 YPR011CYPR011C 981 nt13.59□□□□□ -0.23
YFL040WP43562 PTC2YER089C 1395 nt13.58□□□□□ -0.23
YFL040WP43562 YLR236CYLR236C 324 nt13.55□□□□□ -0.24
YFL040WP43562 INM2YDR287W 879 nt13.5□□□□□ -0.25
YFL040WP43562 TRM9YML014W 840 nt13.48□□□□□ -0.25
YFL040WP43562 YLR154C-GYLR154C-G 150 nt13.46□□□□□ -0.25
YFL040WP43562 YBL100CYBL100C 315 nt13.45□□□□□ -0.26
YFL040WP43562 SIS1YNL007C 1059 nt13.43□□□□□ -0.26
YFL040WP43562 SPT5YML010W 3192 nt13.4□□□□□ -0.26
Retrieved 100 of 7,029 protein–RNA pairs in 12.5 ms