RNA–Protein interactions for RNA: YMR118C

SHH3, Transcript of Putative mitochondrial inner membrane protein of unknown function, yeastyeast

Gene SHH3, Length 591 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHH3YMR118C SEC3P33332 1336 aaKnown RBP4.7□□□□□ -1.66
SHH3YMR118C TRK2P28584 889 aa4.69□□□□□ -1.66
SHH3YMR118C DMA1P38823 416 aa4.69□□□□□ -1.66
SHH3YMR118C RTF1P53064 558 aa4.69□□□□□ -1.66
SHH3YMR118C TEA1P47988 759 aa4.68□□□□□ -1.66
SHH3YMR118C TSC11P40061 1430 aa4.67□□□□□ -1.66
SHH3YMR118C IES2P40154 320 aa4.67□□□□□ -1.66
SHH3YMR118C ACO2P39533 789 aa4.66□□□□□ -1.66
SHH3YMR118C RTT106P40161 455 aa4.66□□□□□ -1.66
SHH3YMR118C YJR115WP47152 169 aa4.66□□□□□ -1.66
SHH3YMR118C KXD1P53158 218 aa4.66□□□□□ -1.66
SHH3YMR118C CAF120P53836 1060 aa4.66□□□□□ -1.66
SHH3YMR118C SPT7P35177 1332 aa4.66□□□□□ -1.66
SHH3YMR118C YCF1P39109 1515 aaKnown RBP4.66□□□□□ -1.66
SHH3YMR118C PDR15Q04182 1529 aaKnown RBP4.66□□□□□ -1.66
SHH3YMR118C PEP1P32319 1579 aa4.65□□□□□ -1.66
SHH3YMR118C SIT4P20604 311 aa4.65□□□□□ -1.67
SHH3YMR118C DSF2P38213 736 aa4.65□□□□□ -1.67
SHH3YMR118C MDS3P53094 1487 aa4.64□□□□□ -1.67
SHH3YMR118C NIS1P53939 407 aa4.64□□□□□ -1.67
SHH3YMR118C KOG1P38873 1557 aa4.64□□□□□ -1.67
SHH3YMR118C HXT10P43581 546 aa4.63□□□□□ -1.67
SHH3YMR118C NUP42P49686 430 aaKnown RBP4.63□□□□□ -1.67
SHH3YMR118C SLY41P22215 453 aa4.62□□□□□ -1.67
SHH3YMR118C SYH1Q02875 849 aaKnown RBP4.62□□□□□ -1.67
SHH3YMR118C SPB4P25808 606 aaPredicted RBP4.61□□□□□ -1.67
SHH3YMR118C TPD3P31383 635 aa4.61□□□□□ -1.67
SHH3YMR118C YGR035CP53222 116 aa4.61□□□□□ -1.67
SHH3YMR118C PDC1P06169 563 aaKnown RBP4.6□□□□□ -1.67
SHH3YMR118C DIT2P21595 489 aa4.6□□□□□ -1.67
SHH3YMR118C YMR196WQ04336 1088 aa4.6□□□□□ -1.67
SHH3YMR118C VPS15P22219 1454 aa4.59□□□□□ -1.67
SHH3YMR118C UGA3P26370 528 aa4.59□□□□□ -1.67
SHH3YMR118C MSB3P48566 633 aaPredicted RBP4.59□□□□□ -1.67
SHH3YMR118C FPK1P53739 893 aa4.59□□□□□ -1.67
SHH3YMR118C ULS1Q08562 1619 aa4.59□□□□□ -1.67
SHH3YMR118C PDR10P51533 1564 aa4.58□□□□□ -1.68
SHH3YMR118C TY3B-GQ99315 1547 aa4.58□□□□□ -1.68
SHH3YMR118C KIP2P28743 706 aa4.58□□□□□ -1.68
SHH3YMR118C PRS1P32895 427 aaKnown RBP4.58□□□□□ -1.68
SHH3YMR118C TBF1Q02457 562 aa4.58□□□□□ -1.68
SHH3YMR118C YLR346CQ06139 101 aa4.58□□□□□ -1.68
SHH3YMR118C RQC2Q12532 1038 aaKnown RBP4.58□□□□□ -1.68
SHH3YMR118C MLP2P40457 1679 aa4.57□□□□□ -1.68
SHH3YMR118C OPT2Q06593 877 aa4.57□□□□□ -1.68
SHH3YMR118C ALR1Q08269 859 aa4.57□□□□□ -1.68
SHH3YMR118C SRF1Q12516 437 aa4.57□□□□□ -1.68
SHH3YMR118C ICP55P40051 511 aa4.56□□□□□ -1.68
SHH3YMR118C PUS6P53294 404 aa4.56□□□□□ -1.68
SHH3YMR118C HPF1Q05164 967 aa4.56□□□□□ -1.68
SHH3YMR118C YDL206WQ12424 762 aa4.56□□□□□ -1.68
SHH3YMR118C NUP159P40477 1460 aa4.56□□□□□ -1.68
SHH3YMR118C SNT2P53127 1403 aa4.55□□□□□ -1.68
SHH3YMR118C IXR1P33417 597 aa4.55□□□□□ -1.68
SHH3YMR118C PTK2P47116 818 aaKnown RBP4.55□□□□□ -1.68
SHH3YMR118C RPA14P50106 137 aa4.55□□□□□ -1.68
SHH3YMR118C VTH1P40438 1549 aa4.55□□□□□ -1.68
SHH3YMR118C VTH2P40890 1549 aa4.55□□□□□ -1.68
SHH3YMR118C LEU3P08638 886 aa4.54□□□□□ -1.68
SHH3YMR118C SCJ1P25303 377 aa4.54□□□□□ -1.68
SHH3YMR118C YPR097WQ06839 1073 aa4.54□□□□□ -1.68
SHH3YMR118C SRB8P25648 1427 aa4.54□□□□□ -1.68
SHH3YMR118C CAT8P39113 1433 aa4.54□□□□□ -1.68
SHH3YMR118C MHP1P43638 1398 aa4.53□□□□□ -1.68
SHH3YMR118C DNF1P32660 1571 aa4.53□□□□□ -1.68
SHH3YMR118C NOP7P53261 605 aaKnown RBP4.53□□□□□ -1.68
SHH3YMR118C YLR419WQ06698 1435 aaKnown RBP4.53□□□□□ -1.68
SHH3YMR118C TRM1P15565 570 aaKnown RBP4.52□□□□□ -1.69
SHH3YMR118C GLY1P37303 387 aaKnown RBP4.52□□□□□ -1.69
SHH3YMR118C YIR007WP40566 764 aa4.52□□□□□ -1.69
SHH3YMR118C LSB3P43603 459 aaKnown RBP4.52□□□□□ -1.69
SHH3YMR118C TY1B-DR3Q99231 1755 aa4.51□□□□□ -1.69
SHH3YMR118C BUB1P41695 1021 aaKnown RBP RIP-Chip data4.51□□□□□ -1.69not detected
SHH3YMR118C HST2P53686 357 aa4.51□□□□□ -1.69
SHH3YMR118C TYW1Q08960 810 aaKnown RBP4.51□□□□□ -1.69
SHH3YMR118C PUS1Q12211 544 aaKnown RBP4.51□□□□□ -1.69
SHH3YMR118C MMP1Q12372 583 aa4.51□□□□□ -1.69
SHH3YMR118C TY2B-LR1P0C2J3 1770 aa4.5□□□□□ -1.69
SHH3YMR118C TY2B-FP0CX63 1770 aa4.5□□□□□ -1.69
SHH3YMR118C TY2B-GR2P0CX64 1770 aa4.5□□□□□ -1.69
SHH3YMR118C TY2B-CP25384 1770 aa4.5□□□□□ -1.69
SHH3YMR118C TY2B-DR2Q03494 1770 aa4.5□□□□□ -1.69
SHH3YMR118C TY1B-DR1Q03855 1755 aa4.5□□□□□ -1.69
SHH3YMR118C TY2B-DR3Q07791 1770 aaKnown RBP4.5□□□□□ -1.69
SHH3YMR118C TY2B-OR1Q12113 1770 aa4.5□□□□□ -1.69
SHH3YMR118C TY2B-DR1Q12472 1770 aa4.5□□□□□ -1.69
SHH3YMR118C TY2B-OR2Q12501 1770 aa4.5□□□□□ -1.69
SHH3YMR118C GEA2P39993 1459 aaKnown RBP4.5□□□□□ -1.69
SHH3YMR118C MRT4P33201 236 aaKnown RBP4.5□□□□□ -1.69
SHH3YMR118C NUP85P46673 744 aa4.5□□□□□ -1.69
SHH3YMR118C YPR204WQ08995 1032 aa4.5□□□□□ -1.69
SHH3YMR118C ESC1Q03661 1658 aaKnown RBP4.49□□□□□ -1.69
SHH3YMR118C CAB3P36076 571 aa4.49□□□□□ -1.69
SHH3YMR118C SCW11P53189 542 aa4.49□□□□□ -1.69
SHH3YMR118C ATF2P53296 535 aa4.49□□□□□ -1.69
SHH3YMR118C GLN1P32288 370 aaKnown RBP4.48□□□□□ -1.69
SHH3YMR118C IRC20Q06554 1556 aa4.48□□□□□ -1.69
SHH3YMR118C PDR5P33302 1511 aaKnown RBP4.47□□□□□ -1.69
SHH3YMR118C MIP1P15801 1254 aa4.47□□□□□ -1.69
SHH3YMR118C ESS1P22696 170 aa4.47□□□□□ -1.69
Retrieved 100 of 5,963 RNA–protein pairs in 60.2 ms