RNA–Protein interactions for RNA: ENST00000592314.5

SF3A2-206, Transcript of splicing factor 3a subunit 2, humanhuman

TSL 5

Gene SF3A2, Length 885 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2-206ENST00000592314 CCDC141Q6ZP82 1450 aa23.99■■□□□ 1.43
SF3A2-206ENST00000592314 KDM5DQ9BY66 1539 aa23.99■■□□□ 1.43
SF3A2-206ENST00000592314 PZPP20742 1482 aa23.97■■□□□ 1.43
SF3A2-206ENST00000592314 NCOA2Q15596 1464 aa23.97■■□□□ 1.43
SF3A2-206ENST00000592314 PPP6R1Q9UPN7 881 aa23.97■■□□□ 1.43
SF3A2-206ENST00000592314 UBAP1LF5GYI3 381 aa23.96■■□□□ 1.43
SF3A2-206ENST00000592314 FBXO31Q5XUX0 539 aaPredicted RBP23.95■■□□□ 1.42
SF3A2-206ENST00000592314 FAM135AQ9P2D6 1515 aa23.94■■□□□ 1.42
SF3A2-206ENST00000592314 TNRQ92752 1358 aa23.93■■□□□ 1.42
SF3A2-206ENST00000592314 ARHGEF5Q12774 1597 aa23.91■■□□□ 1.42
SF3A2-206ENST00000592314 KIF3BO15066 747 aa23.9■■□□□ 1.42
SF3A2-206ENST00000592314 VWDEQ8N2E2 1590 aa23.9■■□□□ 1.42
SF3A2-206ENST00000592314 RNF17Q9BXT8 1623 aaKnown RBP23.88■■□□□ 1.41
SF3A2-206ENST00000592314 ALKQ9UM73 1620 aa23.88■■□□□ 1.41
SF3A2-206ENST00000592314 CPS1P31327 1500 aa23.87■■□□□ 1.41
SF3A2-206ENST00000592314 SHANK2Q9UPX8 1470 aa23.87■■□□□ 1.41
SF3A2-206ENST00000592314 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.85■■□□□ 1.413e-8■■□□□ 12.1
SF3A2-206ENST00000592314 DEPDC5O75140 1603 aa23.84■■□□□ 1.41
SF3A2-206ENST00000592314 STRCP1A6NGW2 1772 aa23.84■■□□□ 1.41
SF3A2-206ENST00000592314 MROH1Q8NDA8 1641 aa23.84■■□□□ 1.41
SF3A2-206ENST00000592314 UGGT1Q9NYU2 1555 aa23.83■■□□□ 1.41
SF3A2-206ENST00000592314 ABCC3O15438 1527 aa23.83■■□□□ 1.41
SF3A2-206ENST00000592314 MIA2Q96PC5 1412 aa23.83■■□□□ 1.4
SF3A2-206ENST00000592314 MED1Q15648 1581 aaPredicted RBP23.82■■□□□ 1.4
SF3A2-206ENST00000592314 NLRP1Q9C000 1473 aa23.82■■□□□ 1.4
SF3A2-206ENST00000592314 MAST1Q9Y2H9 1570 aa23.82■■□□□ 1.4
SF3A2-206ENST00000592314 WASHC2CQ9Y4E1 1318 aa23.82■■□□□ 1.4
SF3A2-206ENST00000592314 IQGAP1P46940 1657 aa23.81■■□□□ 1.4
SF3A2-206ENST00000592314 ZC3H13Q5T200 1668 aaKnown RBP23.81■■□□□ 1.4
SF3A2-206ENST00000592314 MED14O60244 1454 aa23.81■■□□□ 1.4
SF3A2-206ENST00000592314 CEP152O94986 1710 aa23.79■■□□□ 1.4
SF3A2-206ENST00000592314 HSPA1LP34931 641 aa23.79■■□□□ 1.4
SF3A2-206ENST00000592314 EIF2AK4Q9P2K8 1649 aaKnown RBP23.78■■□□□ 1.4
SF3A2-206ENST00000592314 LRRC9Q6ZRR7 1453 aa23.78■■□□□ 1.4
SF3A2-206ENST00000592314 NPHP4O75161 1426 aaPredicted RBP23.77■■□□□ 1.4
SF3A2-206ENST00000592314 PIP4K2BP78356 416 aa23.76■■□□□ 1.39
SF3A2-206ENST00000592314 RSPH4AQ5TD94 716 aa23.75■■□□□ 1.39
SF3A2-206ENST00000592314 ERVK-7P63135 1459 aa23.75■■□□□ 1.39
SF3A2-206ENST00000592314 UBR1Q8IWV7 1749 aa23.74■■□□□ 1.39
SF3A2-206ENST00000592314 SCAF1Q9H7N4 1312 aaKnown RBP23.74■■□□□ 1.39
SF3A2-206ENST00000592314 CFAP65Q6ZU64 1925 aaKnown RBP23.74■■□□□ 1.39
SF3A2-206ENST00000592314 ANKLE2Q86XL3 938 aa23.73■■□□□ 1.39
SF3A2-206ENST00000592314 VPS8Q8N3P4 1428 aa23.72■■□□□ 1.39
SF3A2-206ENST00000592314 THEMISQ8N1K5 641 aaPredicted RBP23.71■■□□□ 1.39
SF3A2-206ENST00000592314 SYNMO15061 1565 aa23.69■■□□□ 1.38
SF3A2-206ENST00000592314 LRRC7Q96NW7 1537 aa23.69■■□□□ 1.38
SF3A2-206ENST00000592314 TOM1O60784 492 aa23.68■■□□□ 1.38
SF3A2-206ENST00000592314 TSPY4P0CV99 314 aa23.68■■□□□ 1.38
SF3A2-206ENST00000592314 TSPY10P0CW01 314 aa23.68■■□□□ 1.38
SF3A2-206ENST00000592314 CROCC2H7BZ55 1655 aa23.67■■□□□ 1.38
SF3A2-206ENST00000592314 KANK4Q5T7N3 995 aaPredicted RBP23.66■■□□□ 1.38
SF3A2-206ENST00000592314 XIRP1Q702N8 1843 aaKnown RBP23.66■■□□□ 1.38
SF3A2-206ENST00000592314 MYOM3Q5VTT5 1437 aa23.65■■□□□ 1.38
SF3A2-206ENST00000592314 PRDM15P57071 1507 aaPredicted RBP23.64■■□□□ 1.38
SF3A2-206ENST00000592314 DUOX2Q9NRD8 1548 aa23.63■■□□□ 1.37
SF3A2-206ENST00000592314 MAP3K1Q13233 1512 aa23.62■■□□□ 1.37
SF3A2-206ENST00000592314 ARHGAP23Q9P227 1491 aa23.61■■□□□ 1.37
SF3A2-206ENST00000592314 SCAF11Q99590 1463 aaKnown RBP23.6■■□□□ 1.37
SF3A2-206ENST00000592314 SLIT1O75093 1534 aa23.59■■□□□ 1.37
SF3A2-206ENST00000592314 PIK3C2BO00750 1634 aa23.58■■□□□ 1.36
SF3A2-206ENST00000592314 LOC105371045A0A1W2PR82 267 aa23.57■■□□□ 1.36
SF3A2-206ENST00000592314 LTKP29376 864 aa23.55■■□□□ 1.36
SF3A2-206ENST00000592314 ARHGAP31Q2M1Z3 1444 aa23.55■■□□□ 1.36
SF3A2-206ENST00000592314 PTPN23Q9H3S7 1636 aa23.55■■□□□ 1.36
SF3A2-206ENST00000592314 KIF15Q9NS87 1388 aa23.54■■□□□ 1.36
SF3A2-206ENST00000592314 ABCC5O15440 1437 aa23.54■■□□□ 1.36
SF3A2-206ENST00000592314 SENP3Q9H4L4 574 aaPredicted RBP23.54■■□□□ 1.36
SF3A2-206ENST00000592314 ERBINQ96RT1 1412 aa23.53■■□□□ 1.36
SF3A2-206ENST00000592314 DAPK1P53355 1430 aa23.48■■□□□ 1.35
SF3A2-206ENST00000592314 KDM5AP29375 1690 aaKnown RBP23.48■■□□□ 1.35
SF3A2-206ENST00000592314 RRP7BPQ9NSQ0 103 aa23.46■■□□□ 1.35
SF3A2-206ENST00000592314 TXNDC2Q86VQ3 553 aa23.45■■□□□ 1.34
SF3A2-206ENST00000592314 LMTK2Q8IWU2 1503 aa23.44■■□□□ 1.34
SF3A2-206ENST00000592314 TMEM2Q9UHN6 1383 aa23.43■■□□□ 1.34
SF3A2-206ENST00000592314 PHF23Q9BUL5 403 aaPredicted RBP23.43■■□□□ 1.34
SF3A2-206ENST00000592314 EFCAB6Q5THR3 1501 aa23.43■■□□□ 1.34
SF3A2-206ENST00000592314 FGD6Q6ZV73 1430 aa23.42■■□□□ 1.34
SF3A2-206ENST00000592314 TET3O43151 1660 aa23.41■■□□□ 1.34
SF3A2-206ENST00000592314 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.41■■□□□ 1.341e-6■□□□□ 10
SF3A2-206ENST00000592314 RGS17Q9UGC6 210 aaPredicted RBP23.39■■□□□ 1.33
SF3A2-206ENST00000592314 ADGRB3O60242 1522 aa23.38■■□□□ 1.33
SF3A2-206ENST00000592314 ROBO1Q9Y6N7 1651 aa23.38■■□□□ 1.33
SF3A2-206ENST00000592314 NWD1Q149M9 1564 aa23.37■■□□□ 1.33
SF3A2-206ENST00000592314 MYO5BQ9ULV0 1848 aa23.36■■□□□ 1.33
SF3A2-206ENST00000592314 NOS1P29475 1434 aa23.36■■□□□ 1.33
SF3A2-206ENST00000592314 IDI1Q13907 227 aa23.35■■□□□ 1.33
SF3A2-206ENST00000592314 EID1Q9Y6B2 187 aa23.35■■□□□ 1.33
SF3A2-206ENST00000592314 TMEM94Q12767 1356 aa23.35■■□□□ 1.33
SF3A2-206ENST00000592314 CHIC2Q9UKJ5 165 aa23.34■■□□□ 1.33
SF3A2-206ENST00000592314 KANK1Q14678 1352 aa23.34■■□□□ 1.33
SF3A2-206ENST00000592314 FAM135BQ49AJ0 1406 aa23.33■■□□□ 1.33
SF3A2-206ENST00000592314 ADGRL2O95490 1459 aa23.31■■□□□ 1.32
SF3A2-206ENST00000592314 ANKRD30AQ9BXX3 1397 aa23.3■■□□□ 1.32
SF3A2-206ENST00000592314 GCC2Q8IWJ2 1684 aa23.3■■□□□ 1.32
SF3A2-206ENST00000592314 RBM33Q96EV2 1170 aaKnown RBP23.3■■□□□ 1.32
SF3A2-206ENST00000592314 SLC26A8Q96RN1 970 aa23.3■■□□□ 1.32
SF3A2-206ENST00000592314 NKTRP30414 1462 aaKnown RBP23.29■■□□□ 1.32
SF3A2-206ENST00000592314 STAG3Q9UJ98 1225 aa23.28■■□□□ 1.32
SF3A2-206ENST00000592314 KCNA6P17658 529 aa23.27■■□□□ 1.32
SF3A2-206ENST00000592314 CHD2O14647 1828 aaKnown RBP23.26■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms