RNA–Protein interactions for RNA: ENST00000590034.2

SF3A2-205, Transcript of splicing factor 3a subunit 2, humanhuman

TSL 3

Gene SF3A2, Length 573 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2-205ENST00000590034 ILDR2Q71H61 639 aa22.31■■□□□ 1.16
SF3A2-205ENST00000590034 SPATA31D1Q6ZQQ2 1576 aa22.3■■□□□ 1.16
SF3A2-205ENST00000590034 PZPP20742 1482 aa22.3■■□□□ 1.16
SF3A2-205ENST00000590034 KIF3BO15066 747 aa22.3■■□□□ 1.16
SF3A2-205ENST00000590034 FAM135AQ9P2D6 1515 aa22.3■■□□□ 1.16
SF3A2-205ENST00000590034 POLR1AO95602 1720 aaPredicted RBP22.29■■□□□ 1.16
SF3A2-205ENST00000590034 FBXO31Q5XUX0 539 aaPredicted RBP22.29■■□□□ 1.16
SF3A2-205ENST00000590034 NEURL4Q96JN8 1562 aa22.29■■□□□ 1.16
SF3A2-205ENST00000590034 TNRQ92752 1358 aa22.27■■□□□ 1.16
SF3A2-205ENST00000590034 LRRC9Q6ZRR7 1453 aa22.26■■□□□ 1.15
SF3A2-205ENST00000590034 VPS8Q8N3P4 1428 aa22.25■■□□□ 1.15
SF3A2-205ENST00000590034 RSPH4AQ5TD94 716 aa22.25■■□□□ 1.15
SF3A2-205ENST00000590034 RNF17Q9BXT8 1623 aaKnown RBP22.23■■□□□ 1.15
SF3A2-205ENST00000590034 WASHC2CQ9Y4E1 1318 aa22.22■■□□□ 1.15
SF3A2-205ENST00000590034 MAST1Q9Y2H9 1570 aa22.21■■□□□ 1.15
SF3A2-205ENST00000590034 UBAP1LF5GYI3 381 aa22.21■■□□□ 1.15
SF3A2-205ENST00000590034 ABCC3O15438 1527 aa22.18■■□□□ 1.14
SF3A2-205ENST00000590034 MIA2Q96PC5 1412 aa22.18■■□□□ 1.14
SF3A2-205ENST00000590034 LOC105371045A0A1W2PR82 267 aa22.18■■□□□ 1.14
SF3A2-205ENST00000590034 MROH1Q8NDA8 1641 aa22.17■■□□□ 1.14
SF3A2-205ENST00000590034 NLRP1Q9C000 1473 aa22.17■■□□□ 1.14
SF3A2-205ENST00000590034 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.17■■□□□ 1.145e-8■□□□□ 8.8
SF3A2-205ENST00000590034 TSPY4P0CV99 314 aa22.17■■□□□ 1.14
SF3A2-205ENST00000590034 TSPY10P0CW01 314 aa22.17■■□□□ 1.14
SF3A2-205ENST00000590034 KANK4Q5T7N3 995 aaPredicted RBP22.17■■□□□ 1.14
SF3A2-205ENST00000590034 ZC3H13Q5T200 1668 aaKnown RBP22.17■■□□□ 1.14
SF3A2-205ENST00000590034 UGGT1Q9NYU2 1555 aa22.16■■□□□ 1.14
SF3A2-205ENST00000590034 EIF2AK4Q9P2K8 1649 aaKnown RBP22.16■■□□□ 1.14
SF3A2-205ENST00000590034 VWDEQ8N2E2 1590 aa22.15■■□□□ 1.14
SF3A2-205ENST00000590034 MAP3K1Q13233 1512 aa22.15■■□□□ 1.14
SF3A2-205ENST00000590034 CPS1P31327 1500 aa22.14■■□□□ 1.13
SF3A2-205ENST00000590034 SHANK2Q9UPX8 1470 aa22.14■■□□□ 1.13
SF3A2-205ENST00000590034 DEPDC5O75140 1603 aa22.13■■□□□ 1.13
SF3A2-205ENST00000590034 SOCS7O14512 581 aa22.13■■□□□ 1.13
SF3A2-205ENST00000590034 CEP152O94986 1710 aa22.13■■□□□ 1.13
SF3A2-205ENST00000590034 MYOM3Q5VTT5 1437 aa22.13■■□□□ 1.13
SF3A2-205ENST00000590034 MED14O60244 1454 aa22.11■■□□□ 1.13
SF3A2-205ENST00000590034 ANKLE2Q86XL3 938 aa22.1■■□□□ 1.13
SF3A2-205ENST00000590034 IQGAP1P46940 1657 aa22.1■■□□□ 1.13
SF3A2-205ENST00000590034 ERVK-7P63135 1459 aa22.09■■□□□ 1.13
SF3A2-205ENST00000590034 NPHP4O75161 1426 aaPredicted RBP22.09■■□□□ 1.13
SF3A2-205ENST00000590034 THEMISQ8N1K5 641 aaPredicted RBP22.09■■□□□ 1.13
SF3A2-205ENST00000590034 CFAP65Q6ZU64 1925 aaKnown RBP22.09■■□□□ 1.13
SF3A2-205ENST00000590034 STRCP1A6NGW2 1772 aa22.07■■□□□ 1.12
SF3A2-205ENST00000590034 CROCC2H7BZ55 1655 aa22.07■■□□□ 1.12
SF3A2-205ENST00000590034 ALKQ9UM73 1620 aa22.06■■□□□ 1.12
SF3A2-205ENST00000590034 UBR1Q8IWV7 1749 aa22.06■■□□□ 1.12
SF3A2-205ENST00000590034 DUOX2Q9NRD8 1548 aa22.06■■□□□ 1.12
SF3A2-205ENST00000590034 PRDM15P57071 1507 aaPredicted RBP22.03■■□□□ 1.12
SF3A2-205ENST00000590034 HSPA1LP34931 641 aa22.02■■□□□ 1.12
SF3A2-205ENST00000590034 PIP4K2BP78356 416 aa22.02■■□□□ 1.12
SF3A2-205ENST00000590034 SCAF1Q9H7N4 1312 aaKnown RBP22.02■■□□□ 1.12
SF3A2-205ENST00000590034 ABCC5O15440 1437 aa22.01■■□□□ 1.11
SF3A2-205ENST00000590034 PTPN23Q9H3S7 1636 aa22.01■■□□□ 1.11
SF3A2-205ENST00000590034 KIF15Q9NS87 1388 aa21.99■■□□□ 1.11
SF3A2-205ENST00000590034 TOM1O60784 492 aa21.99■■□□□ 1.11
SF3A2-205ENST00000590034 MED1Q15648 1581 aaPredicted RBP21.98■■□□□ 1.11
SF3A2-205ENST00000590034 ERBINQ96RT1 1412 aa21.97■■□□□ 1.11
SF3A2-205ENST00000590034 LRRC7Q96NW7 1537 aa21.97■■□□□ 1.11
SF3A2-205ENST00000590034 SYNMO15061 1565 aa21.96■■□□□ 1.11
SF3A2-205ENST00000590034 ARHGAP31Q2M1Z3 1444 aa21.96■■□□□ 1.11
SF3A2-205ENST00000590034 DAPK1P53355 1430 aa21.95■■□□□ 1.1
SF3A2-205ENST00000590034 SCAF11Q99590 1463 aaKnown RBP21.95■■□□□ 1.1
SF3A2-205ENST00000590034 ARHGAP23Q9P227 1491 aa21.95■■□□□ 1.1
SF3A2-205ENST00000590034 SLIT1O75093 1534 aa21.94■■□□□ 1.1
SF3A2-205ENST00000590034 RRP7BPQ9NSQ0 103 aa21.93■■□□□ 1.1
SF3A2-205ENST00000590034 PIK3C2BO00750 1634 aa21.92■■□□□ 1.1
SF3A2-205ENST00000590034 FGD6Q6ZV73 1430 aa21.92■■□□□ 1.1
SF3A2-205ENST00000590034 LTKP29376 864 aa21.91■■□□□ 1.1
SF3A2-205ENST00000590034 XIRP1Q702N8 1843 aaKnown RBP21.9■■□□□ 1.1
SF3A2-205ENST00000590034 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.87■■□□□ 1.092e-6■□□□□ 10.4
SF3A2-205ENST00000590034 LMTK2Q8IWU2 1503 aa21.86■■□□□ 1.09
SF3A2-205ENST00000590034 TXNDC2Q86VQ3 553 aa21.85■■□□□ 1.09
SF3A2-205ENST00000590034 KDM5AP29375 1690 aaKnown RBP21.84■■□□□ 1.09
SF3A2-205ENST00000590034 APLP2Q06481 763 aa21.83■■□□□ 1.09
SF3A2-205ENST00000590034 CHIC2Q9UKJ5 165 aa21.83■■□□□ 1.09
SF3A2-205ENST00000590034 TMEM2Q9UHN6 1383 aa21.83■■□□□ 1.08
SF3A2-205ENST00000590034 KANK1Q14678 1352 aa21.82■■□□□ 1.08
SF3A2-205ENST00000590034 ANKRD30AQ9BXX3 1397 aa21.82■■□□□ 1.08
SF3A2-205ENST00000590034 EFCAB6Q5THR3 1501 aa21.81■■□□□ 1.08
SF3A2-205ENST00000590034 SENP3Q9H4L4 574 aaPredicted RBP21.8■■□□□ 1.08
SF3A2-205ENST00000590034 ADGRL2O95490 1459 aa21.79■■□□□ 1.08
SF3A2-205ENST00000590034 IDI1Q13907 227 aa21.78■■□□□ 1.08
SF3A2-205ENST00000590034 EID1Q9Y6B2 187 aa21.78■■□□□ 1.08
SF3A2-205ENST00000590034 NOS1P29475 1434 aa21.78■■□□□ 1.08
SF3A2-205ENST00000590034 ADGRB3O60242 1522 aa21.76■■□□□ 1.07
SF3A2-205ENST00000590034 TET3O43151 1660 aa21.76■■□□□ 1.07
SF3A2-205ENST00000590034 STAG3Q9UJ98 1225 aa21.74■■□□□ 1.07
SF3A2-205ENST00000590034 MYO5BQ9ULV0 1848 aa21.72■■□□□ 1.07
SF3A2-205ENST00000590034 PHF23Q9BUL5 403 aaPredicted RBP21.7■■□□□ 1.06
SF3A2-205ENST00000590034 TMEM94Q12767 1356 aa21.7■■□□□ 1.06
SF3A2-205ENST00000590034 NWD1Q149M9 1564 aa21.7■■□□□ 1.06
SF3A2-205ENST00000590034 SLC26A8Q96RN1 970 aa21.69■■□□□ 1.06
SF3A2-205ENST00000590034 ANKRD50Q9ULJ7 1429 aa21.69■■□□□ 1.06
SF3A2-205ENST00000590034 RPRD2Q5VT52 1461 aaKnown RBP21.68■■□□□ 1.06
SF3A2-205ENST00000590034 GCC2Q8IWJ2 1684 aa21.67■■□□□ 1.06
SF3A2-205ENST00000590034 KCNA6P17658 529 aa21.67■■□□□ 1.06
SF3A2-205ENST00000590034 FAM50AQ14320 339 aaKnown RBP21.67■■□□□ 1.06
SF3A2-205ENST00000590034 FAM135BQ49AJ0 1406 aa21.66■■□□□ 1.06
SF3A2-205ENST00000590034 ZFYVE9O95405 1425 aa21.65■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 125.9 ms