RNA–Protein interactions for RNA: ENST00000564106.1

UBFD1-203, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 587 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-203ENST00000564106 CROCC2H7BZ55 1655 aa14.84□□□□□ -0.03
UBFD1-203ENST00000564106 KDM5DQ9BY66 1539 aa14.83□□□□□ -0.04
UBFD1-203ENST00000564106 KIF3BO15066 747 aa14.83□□□□□ -0.04
UBFD1-203ENST00000564106 FBXO31Q5XUX0 539 aaPredicted RBP14.83□□□□□ -0.04
UBFD1-203ENST00000564106 PTPRTO14522 1441 aa14.83□□□□□ -0.04
UBFD1-203ENST00000564106 DNMT1P26358 1616 aaKnown RBP14.82□□□□□ -0.04
UBFD1-203ENST00000564106 NCKAP5LQ9HCH0 1330 aa14.82□□□□□ -0.04
UBFD1-203ENST00000564106 PTPN23Q9H3S7 1636 aa14.81□□□□□ -0.04
UBFD1-203ENST00000564106 CEP152O94986 1710 aa14.8□□□□□ -0.04
UBFD1-203ENST00000564106 ABCC5O15440 1437 aa14.8□□□□□ -0.04
UBFD1-203ENST00000564106 MIA2Q96PC5 1412 aa14.8□□□□□ -0.04
UBFD1-203ENST00000564106 PZPP20742 1482 aa14.8□□□□□ -0.04
UBFD1-203ENST00000564106 TCOF1Q13428 1488 aaKnown RBP14.8□□□□□ -0.04
UBFD1-203ENST00000564106 ABCC3O15438 1527 aa14.8□□□□□ -0.04
UBFD1-203ENST00000564106 NEURL4Q96JN8 1562 aa14.79□□□□□ -0.04
UBFD1-203ENST00000564106 EIF2AK4Q9P2K8 1649 aaKnown RBP14.77□□□□□ -0.04
UBFD1-203ENST00000564106 A2ML1A8K2U0 1454 aa14.77□□□□□ -0.04
UBFD1-203ENST00000564106 PLA2R1Q13018 1463 aa14.76□□□□□ -0.05
UBFD1-203ENST00000564106 FGD6Q6ZV73 1430 aa14.75□□□□□ -0.05
UBFD1-203ENST00000564106 TNRQ92752 1358 aa14.75□□□□□ -0.05
UBFD1-203ENST00000564106 ZNF335Q9H4Z2 1342 aaPredicted RBP14.75□□□□□ -0.05
UBFD1-203ENST00000564106 RSPH4AQ5TD94 716 aa14.75□□□□□ -0.05
UBFD1-203ENST00000564106 FAM135AQ9P2D6 1515 aa14.75□□□□□ -0.05
UBFD1-203ENST00000564106 POLR1AO95602 1720 aaPredicted RBP14.75□□□□□ -0.05
UBFD1-203ENST00000564106 DAPK1P53355 1430 aa14.75□□□□□ -0.05
UBFD1-203ENST00000564106 RRBP1Q9P2E9 1410 aaKnown RBP14.75□□□□□ -0.05
UBFD1-203ENST00000564106 CFAP65Q6ZU64 1925 aaKnown RBP14.74□□□□□ -0.05
UBFD1-203ENST00000564106 TSPY4P0CV99 314 aa14.74□□□□□ -0.05
UBFD1-203ENST00000564106 TSPY10P0CW01 314 aa14.74□□□□□ -0.05
UBFD1-203ENST00000564106 PPP6R1Q9UPN7 881 aa14.74□□□□□ -0.05
UBFD1-203ENST00000564106 SHANK2Q9UPX8 1470 aa14.73□□□□□ -0.05
UBFD1-203ENST00000564106 ZC3H13Q5T200 1668 aaKnown RBP14.73□□□□□ -0.05
UBFD1-203ENST00000564106 SPATA31D1Q6ZQQ2 1576 aa14.73□□□□□ -0.05
UBFD1-203ENST00000564106 DUOX2Q9NRD8 1548 aa14.72□□□□□ -0.05
UBFD1-203ENST00000564106 WASHC2CQ9Y4E1 1318 aa14.72□□□□□ -0.05
UBFD1-203ENST00000564106 DMRT2Q9Y5R5 561 aa14.72□□□□□ -0.05
UBFD1-203ENST00000564106 PRDM15P57071 1507 aaPredicted RBP14.71□□□□□ -0.05
UBFD1-203ENST00000564106 ERVK-7P63135 1459 aa14.71□□□□□ -0.05
UBFD1-203ENST00000564106 DEPDC5O75140 1603 aa14.71□□□□□ -0.05
UBFD1-203ENST00000564106 KIF15Q9NS87 1388 aa14.71□□□□□ -0.06
UBFD1-203ENST00000564106 RRP7BPQ9NSQ0 103 aa14.69□□□□□ -0.06
UBFD1-203ENST00000564106 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.69□□□□□ -0.06
UBFD1-203ENST00000564106 CHIC2Q9UKJ5 165 aa14.68□□□□□ -0.06
UBFD1-203ENST00000564106 UGGT1Q9NYU2 1555 aa14.68□□□□□ -0.06
UBFD1-203ENST00000564106 UBR1Q8IWV7 1749 aa14.67□□□□□ -0.06
UBFD1-203ENST00000564106 STRCP1A6NGW2 1772 aa14.67□□□□□ -0.06
UBFD1-203ENST00000564106 VWDEQ8N2E2 1590 aa14.66□□□□□ -0.06
UBFD1-203ENST00000564106 NLRP1Q9C000 1473 aa14.66□□□□□ -0.06
UBFD1-203ENST00000564106 PKD2Q13563 968 aa14.66□□□□□ -0.06
UBFD1-203ENST00000564106 ERBINQ96RT1 1412 aa14.66□□□□□ -0.06
UBFD1-203ENST00000564106 ADGRL2O95490 1459 aa14.63□□□□□ -0.07
UBFD1-203ENST00000564106 SYNMO15061 1565 aa14.63□□□□□ -0.07
UBFD1-203ENST00000564106 IQSEC2Q5JU85 1478 aa14.63□□□□□ -0.07
UBFD1-203ENST00000564106 PIK3C2BO00750 1634 aa14.63□□□□□ -0.07
UBFD1-203ENST00000564106 ALKQ9UM73 1620 aa14.63□□□□□ -0.07
UBFD1-203ENST00000564106 IQGAP1P46940 1657 aa14.61□□□□□ -0.07
UBFD1-203ENST00000564106 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.61□□□□□ -0.07
UBFD1-203ENST00000564106 MED14O60244 1454 aa14.61□□□□□ -0.07
UBFD1-203ENST00000564106 ARHGAP31Q2M1Z3 1444 aa14.6□□□□□ -0.07
UBFD1-203ENST00000564106 LMTK2Q8IWU2 1503 aa14.6□□□□□ -0.07
UBFD1-203ENST00000564106 NPHP4O75161 1426 aaPredicted RBP14.59□□□□□ -0.07
UBFD1-203ENST00000564106 ARHGAP23Q9P227 1491 aa14.58□□□□□ -0.08
UBFD1-203ENST00000564106 EFCAB6Q5THR3 1501 aa14.58□□□□□ -0.08
UBFD1-203ENST00000564106 FAM50AQ14320 339 aaKnown RBP14.58□□□□□ -0.08
UBFD1-203ENST00000564106 ANKRD30AQ9BXX3 1397 aa14.58□□□□□ -0.08
UBFD1-203ENST00000564106 LTKP29376 864 aa14.57□□□□□ -0.08
UBFD1-203ENST00000564106 SLIT1O75093 1534 aa14.56□□□□□ -0.08
UBFD1-203ENST00000564106 ANKLE2Q86XL3 938 aa14.55□□□□□ -0.08
UBFD1-203ENST00000564106 THEMISQ8N1K5 641 aaPredicted RBP14.55□□□□□ -0.08
UBFD1-203ENST00000564106 MYO5BQ9ULV0 1848 aa14.55□□□□□ -0.08
UBFD1-203ENST00000564106 HRCP23327 699 aa14.54□□□□□ -0.08
UBFD1-203ENST00000564106 ZEB1P37275 1124 aaPredicted RBP14.54□□□□□ -0.08
UBFD1-203ENST00000564106 NOS1P29475 1434 aa14.54□□□□□ -0.08
UBFD1-203ENST00000564106 XIRP1Q702N8 1843 aaKnown RBP14.54□□□□□ -0.08
UBFD1-203ENST00000564106 UNC13BO14795 1591 aa14.53□□□□□ -0.08
UBFD1-203ENST00000564106 CPS1P31327 1500 aa14.53□□□□□ -0.08
UBFD1-203ENST00000564106 SCAF11Q99590 1463 aaKnown RBP14.53□□□□□ -0.08
UBFD1-203ENST00000564106 ANKRD50Q9ULJ7 1429 aa14.53□□□□□ -0.08
UBFD1-203ENST00000564106 UBAP1LF5GYI3 381 aa14.53□□□□□ -0.08
UBFD1-203ENST00000564106 LRRC7Q96NW7 1537 aa14.51□□□□□ -0.09
UBFD1-203ENST00000564106 ILDR2Q71H61 639 aa14.51□□□□□ -0.09
UBFD1-203ENST00000564106 E9PCH4 1651 aa14.51□□□□□ -0.09
UBFD1-203ENST00000564106 TET3O43151 1660 aa14.51□□□□□ -0.09
UBFD1-203ENST00000564106 IDI1Q13907 227 aa14.5□□□□□ -0.09
UBFD1-203ENST00000564106 ADGRB3O60242 1522 aa14.5□□□□□ -0.09
UBFD1-203ENST00000564106 KDM5AP29375 1690 aaKnown RBP14.49□□□□□ -0.09
UBFD1-203ENST00000564106 GCC2Q8IWJ2 1684 aa14.49□□□□□ -0.09
UBFD1-203ENST00000564106 KANK1Q14678 1352 aa14.48□□□□□ -0.09
UBFD1-203ENST00000564106 TMEM2Q9UHN6 1383 aa14.48□□□□□ -0.09
UBFD1-203ENST00000564106 IQGAP3Q86VI3 1631 aa14.46□□□□□ -0.09
UBFD1-203ENST00000564106 TXNDC2Q86VQ3 553 aa14.46□□□□□ -0.09
UBFD1-203ENST00000564106 SENP3Q9H4L4 574 aaPredicted RBP14.46□□□□□ -0.09
UBFD1-203ENST00000564106 DISP3Q9P2K9 1392 aa14.46□□□□□ -0.1
UBFD1-203ENST00000564106 TMEM131LA2VDJ0 1609 aa14.45□□□□□ -0.1
UBFD1-203ENST00000564106 ITGAEP38570 1179 aa14.45□□□□□ -0.1
UBFD1-203ENST00000564106 HSPA1LP34931 641 aa14.44□□□□□ -0.1
UBFD1-203ENST00000564106 PIP4K2BP78356 416 aa14.44□□□□□ -0.1
UBFD1-203ENST00000564106 CCER1Q8TC90 406 aaPredicted RBP14.44□□□□□ -0.1
UBFD1-203ENST00000564106 ROCK1Q13464 1354 aa14.44□□□□□ -0.1
UBFD1-203ENST00000564106 ZFYVE9O95405 1425 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms