RNA–Protein interactions for RNA: ENST00000564106.1

UBFD1-203, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 587 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-203ENST00000564106 NISCHQ9Y2I1 1504 aa23.57■■□□□ 1.36
UBFD1-203ENST00000564106 CCDC180Q9P1Z9 1646 aa21.07■□□□□ 0.96
UBFD1-203ENST00000564106 ABCC9O60706 1549 aa21.03■□□□□ 0.96
UBFD1-203ENST00000564106 RB1CC1Q8TDY2 1594 aa19.96■□□□□ 0.79
UBFD1-203ENST00000564106 NACADO15069 1562 aa19.84■□□□□ 0.77
UBFD1-203ENST00000564106 DCAF8L2P0C7V8 631 aa19.74■□□□□ 0.75
UBFD1-203ENST00000564106 UNC13AQ9UPW8 1703 aa19.71■□□□□ 0.75
UBFD1-203ENST00000564106 DNAJC5BQ9UF47 199 aa19.7■□□□□ 0.74
UBFD1-203ENST00000564106 PABPN1Q86U42 306 aaKnown RBP eCLIP19.59■□□□□ 0.73
UBFD1-203ENST00000564106 ZCCHC6Q5VYS8 1495 aaKnown RBP19.59■□□□□ 0.73
UBFD1-203ENST00000564106 MYO15BQ96JP2 1530 aa19.58■□□□□ 0.73
UBFD1-203ENST00000564106 BICRAQ9NZM4 1560 aa19.55■□□□□ 0.72
UBFD1-203ENST00000564106 DCAF1Q9Y4B6 1507 aa19.41■□□□□ 0.7
UBFD1-203ENST00000564106 SCRIBQ14160 1630 aa19.3■□□□□ 0.68
UBFD1-203ENST00000564106 SHROOM4Q9ULL8 1493 aa19.05■□□□□ 0.64
UBFD1-203ENST00000564106 CC2D2AQ9P2K1 1620 aa19■□□□□ 0.63
UBFD1-203ENST00000564106 EIF4G1Q04637 1599 aaKnown RBP18.98■□□□□ 0.63
UBFD1-203ENST00000564106 CECR2Q9BXF3 1484 aa18.88■□□□□ 0.61
UBFD1-203ENST00000564106 SMARCA4P51532 1647 aa18.39■□□□□ 0.53
UBFD1-203ENST00000564106 ATAD2BQ9ULI0 1458 aa18.35■□□□□ 0.53
UBFD1-203ENST00000564106 NCAPD3P42695 1498 aa18.34■□□□□ 0.53
UBFD1-203ENST00000564106 MROH2BQ7Z745 1585 aa18.24■□□□□ 0.51
UBFD1-203ENST00000564106 BAZ1AQ9NRL2 1556 aaPredicted RBP18.23■□□□□ 0.51
UBFD1-203ENST00000564106 HMGXB3Q12766 1538 aa18.23■□□□□ 0.51
UBFD1-203ENST00000564106 SMARCA2P51531 1590 aa18.22■□□□□ 0.51
UBFD1-203ENST00000564106 PEG3Q9GZU2 1588 aa18.17■□□□□ 0.5
UBFD1-203ENST00000564106 NESP48681 1621 aa18.16■□□□□ 0.5
UBFD1-203ENST00000564106 BAZ1BQ9UIG0 1483 aaKnown RBP18.13■□□□□ 0.49
UBFD1-203ENST00000564106 WIZO95785 1651 aa18.04■□□□□ 0.48
UBFD1-203ENST00000564106 ERCC6Q03468 1493 aa18.02■□□□□ 0.48
UBFD1-203ENST00000564106 CUX2O14529 1486 aa17.95■□□□□ 0.46
UBFD1-203ENST00000564106 THOC2Q8NI27 1593 aaKnown RBP17.94■□□□□ 0.46
UBFD1-203ENST00000564106 KIF21AQ7Z4S6 1674 aa17.92■□□□□ 0.46
UBFD1-203ENST00000564106 LAMC3Q9Y6N6 1575 aa17.9■□□□□ 0.46
UBFD1-203ENST00000564106 RSF1Q96T23 1441 aaPredicted RBP17.84■□□□□ 0.45
UBFD1-203ENST00000564106 DNAJC5Q9H3Z4 198 aa17.84■□□□□ 0.45
UBFD1-203ENST00000564106 CADPSQ9ULU8 1353 aa17.78■□□□□ 0.44
UBFD1-203ENST00000564106 TOP2AP11388 1531 aaKnown RBP17.73■□□□□ 0.43
UBFD1-203ENST00000564106 PDS5BQ9NTI5 1447 aa17.72■□□□□ 0.43
UBFD1-203ENST00000564106 MRC2Q9UBG0 1479 aa17.66■□□□□ 0.42
UBFD1-203ENST00000564106 WDR62O43379 1518 aa17.65■□□□□ 0.42
UBFD1-203ENST00000564106 CFTRP13569 1480 aa17.63■□□□□ 0.41
UBFD1-203ENST00000564106 FANCD2Q9BXW9 1451 aa17.61■□□□□ 0.41
UBFD1-203ENST00000564106 CEP164Q9UPV0 1460 aa17.59■□□□□ 0.41
UBFD1-203ENST00000564106 CCDC88BA6NC98 1476 aa17.56■□□□□ 0.4
UBFD1-203ENST00000564106 URB2Q14146 1524 aaKnown RBP17.54■□□□□ 0.4
UBFD1-203ENST00000564106 PRDM2Q13029 1718 aa17.51■□□□□ 0.39
UBFD1-203ENST00000564106 TOPBP1Q92547 1522 aa17.32■□□□□ 0.36
UBFD1-203ENST00000564106 ZNF608Q9ULD9 1512 aaPredicted RBP17.32■□□□□ 0.36
UBFD1-203ENST00000564106 DNMBPQ6XZF7 1577 aa17.24■□□□□ 0.35
UBFD1-203ENST00000564106 IFT140Q96RY7 1462 aa17.21■□□□□ 0.35
UBFD1-203ENST00000564106 TARBP1Q13395 1621 aaKnown RBP17.21■□□□□ 0.35
UBFD1-203ENST00000564106 EIF4G3O43432 1585 aaKnown RBP17.2■□□□□ 0.34
UBFD1-203ENST00000564106 POLA1P09884 1462 aaPredicted RBP17.16■□□□□ 0.34
UBFD1-203ENST00000564106 AQRO60306 1485 aaKnown RBP eCLIP17.13■□□□□ 0.33
UBFD1-203ENST00000564106 RAD54L2Q9Y4B4 1467 aa17.13■□□□□ 0.33
UBFD1-203ENST00000564106 TRIM41Q8WV44 630 aa17.13■□□□□ 0.33
UBFD1-203ENST00000564106 CUX1P39880 1505 aa17.12■□□□□ 0.33
UBFD1-203ENST00000564106 ABCC8Q09428 1581 aa17.12■□□□□ 0.33
UBFD1-203ENST00000564106 OSCARQ8IYS5 282 aa17.1■□□□□ 0.33
UBFD1-203ENST00000564106 SUPT5HO00267 1087 aaKnown RBP17.09■□□□□ 0.33
UBFD1-203ENST00000564106 CHD1O14646 1710 aa17.08■□□□□ 0.32
UBFD1-203ENST00000564106 FGD5Q6ZNL6 1462 aa17.06■□□□□ 0.32
UBFD1-203ENST00000564106 RIMBP3CA6NJZ7 1639 aa17.05■□□□□ 0.32
UBFD1-203ENST00000564106 RIMBP3BA6NNM3 1639 aa17.05■□□□□ 0.32
UBFD1-203ENST00000564106 RIMBP3Q9UFD9 1639 aa17.05■□□□□ 0.32
UBFD1-203ENST00000564106 TDRD9Q8NDG6 1382 aaKnown RBP17.02■□□□□ 0.31
UBFD1-203ENST00000564106 WDR97A6NE52 1622 aa17.01■□□□□ 0.31
UBFD1-203ENST00000564106 SOGA1O94964 1423 aa17.01■□□□□ 0.31
UBFD1-203ENST00000564106 ARHGEF11O15085 1522 aa16.97■□□□□ 0.31
UBFD1-203ENST00000564106 SNAPC4Q5SXM2 1469 aa16.95■□□□□ 0.3
UBFD1-203ENST00000564106 PBRM1Q86U86 1689 aa16.9■□□□□ 0.3
UBFD1-203ENST00000564106 SYNJ1O43426 1573 aa16.89■□□□□ 0.29
UBFD1-203ENST00000564106 ABCA5Q8WWZ7 1642 aa16.88■□□□□ 0.29
UBFD1-203ENST00000564106 FBLN2P98095 1184 aa16.87■□□□□ 0.29
UBFD1-203ENST00000564106 CLASP1Q7Z460 1538 aa16.86■□□□□ 0.29
UBFD1-203ENST00000564106 ARAP1Q96P48 1450 aa16.86■□□□□ 0.29
UBFD1-203ENST00000564106 BIVM-ERCC5R4GMW8 1640 aa16.85■□□□□ 0.29
UBFD1-203ENST00000564106 GRIN2BQ13224 1484 aa16.84■□□□□ 0.29
UBFD1-203ENST00000564106 ABCA10Q8WWZ4 1543 aa16.84■□□□□ 0.29
UBFD1-203ENST00000564106 GAPVD1Q14C86 1478 aa16.82■□□□□ 0.28
UBFD1-203ENST00000564106 MAGI1Q96QZ7 1491 aaPredicted RBP16.82■□□□□ 0.28
UBFD1-203ENST00000564106 TOP2BQ02880 1626 aa16.81■□□□□ 0.28
UBFD1-203ENST00000564106 SYNJ2O15056 1496 aa16.79■□□□□ 0.28
UBFD1-203ENST00000564106 WRNQ14191 1432 aaPredicted RBP eCLIP16.77■□□□□ 0.27
UBFD1-203ENST00000564106 CYB5RLQ6IPT4 315 aa16.76■□□□□ 0.27
UBFD1-203ENST00000564106 ADAMTS12P58397 1594 aa16.73■□□□□ 0.27
UBFD1-203ENST00000564106 CHMP7Q8WUX9 453 aaPredicted RBP16.73■□□□□ 0.27
UBFD1-203ENST00000564106 ERCC6L2Q5T890 1561 aa16.7■□□□□ 0.26
UBFD1-203ENST00000564106 CEP170Q5SW79 1584 aa16.68■□□□□ 0.26
UBFD1-203ENST00000564106 GRIN2AQ12879 1464 aa16.67■□□□□ 0.26
UBFD1-203ENST00000564106 NUP160Q12769 1436 aa16.62■□□□□ 0.25
UBFD1-203ENST00000564106 ERICH3Q5RHP9 1530 aa16.6■□□□□ 0.25
UBFD1-203ENST00000564106 FHAD1B1AJZ9 1412 aa16.58■□□□□ 0.24
UBFD1-203ENST00000564106 SHROOM2Q13796 1616 aa16.57■□□□□ 0.24
UBFD1-203ENST00000564106 RUSC2Q8N2Y8 1516 aa16.5■□□□□ 0.23
UBFD1-203ENST00000564106 TRHP20396 242 aaPredicted RBP16.47■□□□□ 0.23
UBFD1-203ENST00000564106 IGF1RP08069 1367 aa16.45■□□□□ 0.22
UBFD1-203ENST00000564106 PRG4Q92954 1404 aaPredicted RBP16.42■□□□□ 0.22
UBFD1-203ENST00000564106 KIF27Q86VH2 1401 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms