RNA–Protein interactions for RNA: ENST00000527442.5

PKP3-205, Transcript of plakophilin 3, humanhuman

TSL 3

Gene PKP3, Length 847 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-205ENST00000527442 DHX29Q7Z478 1369 aaKnown RBP33.22■■■□□ 2.91
PKP3-205ENST00000527442 NEURL4Q96JN8 1562 aa33.21■■■□□ 2.91
PKP3-205ENST00000527442 KDM5DQ9BY66 1539 aa33.18■■■□□ 2.9
PKP3-205ENST00000527442 CCDC141Q6ZP82 1450 aa33.18■■■□□ 2.9
PKP3-205ENST00000527442 CAMSAP2Q08AD1 1489 aa33.17■■■□□ 2.9
PKP3-205ENST00000527442 FAM135AQ9P2D6 1515 aa33.16■■■□□ 2.9
PKP3-205ENST00000527442 PZPP20742 1482 aa33.15■■■□□ 2.9
PKP3-205ENST00000527442 TNRQ92752 1358 aa33.15■■■□□ 2.9
PKP3-205ENST00000527442 FBXO31Q5XUX0 539 aaPredicted RBP33.13■■■□□ 2.89
PKP3-205ENST00000527442 NCOA2Q15596 1464 aa33.12■■■□□ 2.89
PKP3-205ENST00000527442 KIF3BO15066 747 aa33.12■■■□□ 2.89
PKP3-205ENST00000527442 CPS1P31327 1500 aa33.07■■■□□ 2.89
PKP3-205ENST00000527442 ARHGEF5Q12774 1597 aa33.06■■■□□ 2.88
PKP3-205ENST00000527442 SHANK2Q9UPX8 1470 aa33.05■■■□□ 2.88
PKP3-205ENST00000527442 VWDEQ8N2E2 1590 aa33.02■■■□□ 2.88
PKP3-205ENST00000527442 WASHC2CQ9Y4E1 1318 aa33.02■■■□□ 2.88
PKP3-205ENST00000527442 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP33.01■■■□□ 2.882e-6■■■■■ 28.3
PKP3-205ENST00000527442 UGGT1Q9NYU2 1555 aa33■■■□□ 2.87
PKP3-205ENST00000527442 NLRP1Q9C000 1473 aa32.99■■■□□ 2.87
PKP3-205ENST00000527442 DEPDC5O75140 1603 aa32.99■■■□□ 2.87
PKP3-205ENST00000527442 MIA2Q96PC5 1412 aa32.99■■■□□ 2.87
PKP3-205ENST00000527442 RNF17Q9BXT8 1623 aaKnown RBP32.99■■■□□ 2.87
PKP3-205ENST00000527442 MED1Q15648 1581 aaPredicted RBP32.98■■■□□ 2.87
PKP3-205ENST00000527442 SCAF1Q9H7N4 1312 aaKnown RBP32.98■■■□□ 2.87
PKP3-205ENST00000527442 RSPH4AQ5TD94 716 aa32.97■■■□□ 2.87
PKP3-205ENST00000527442 HSPA1LP34931 641 aa32.96■■■□□ 2.87
PKP3-205ENST00000527442 ZC3H13Q5T200 1668 aaKnown RBP32.95■■■□□ 2.87
PKP3-205ENST00000527442 PIP4K2BP78356 416 aa32.95■■■□□ 2.87
PKP3-205ENST00000527442 IQGAP1P46940 1657 aa32.94■■■□□ 2.86
PKP3-205ENST00000527442 MED14O60244 1454 aa32.94■■■□□ 2.86
PKP3-205ENST00000527442 ANKLE2Q86XL3 938 aa32.94■■■□□ 2.86
PKP3-205ENST00000527442 NPHP4O75161 1426 aaPredicted RBP32.93■■■□□ 2.86
PKP3-205ENST00000527442 MAST1Q9Y2H9 1570 aa32.92■■■□□ 2.86
PKP3-205ENST00000527442 ALKQ9UM73 1620 aa32.92■■■□□ 2.86
PKP3-205ENST00000527442 ABCC3O15438 1527 aa32.92■■■□□ 2.86
PKP3-205ENST00000527442 TOM1O60784 492 aa32.91■■■□□ 2.86
PKP3-205ENST00000527442 THEMISQ8N1K5 641 aaPredicted RBP32.91■■■□□ 2.86
PKP3-205ENST00000527442 VPS8Q8N3P4 1428 aa32.9■■■□□ 2.86
PKP3-205ENST00000527442 STRCP1A6NGW2 1772 aa32.9■■■□□ 2.86
PKP3-205ENST00000527442 EIF2AK4Q9P2K8 1649 aaKnown RBP32.89■■■□□ 2.86
PKP3-205ENST00000527442 MROH1Q8NDA8 1641 aa32.88■■■□□ 2.85
PKP3-205ENST00000527442 TSPY4P0CV99 314 aa32.87■■■□□ 2.85
PKP3-205ENST00000527442 TSPY10P0CW01 314 aa32.87■■■□□ 2.85
PKP3-205ENST00000527442 CEP152O94986 1710 aa32.86■■■□□ 2.85
PKP3-205ENST00000527442 LRRC9Q6ZRR7 1453 aa32.85■■■□□ 2.85
PKP3-205ENST00000527442 ERVK-7P63135 1459 aa32.83■■■□□ 2.85
PKP3-205ENST00000527442 UBR1Q8IWV7 1749 aa32.8■■■□□ 2.84
PKP3-205ENST00000527442 SYNMO15061 1565 aa32.8■■■□□ 2.84
PKP3-205ENST00000527442 CFAP65Q6ZU64 1925 aaKnown RBP32.8■■■□□ 2.84
PKP3-205ENST00000527442 LRRC7Q96NW7 1537 aa32.77■■■□□ 2.84
PKP3-205ENST00000527442 DUOX2Q9NRD8 1548 aa32.7■■■□□ 2.83
PKP3-205ENST00000527442 MYOM3Q5VTT5 1437 aa32.69■■■□□ 2.82
PKP3-205ENST00000527442 CROCC2H7BZ55 1655 aa32.68■■■□□ 2.82
PKP3-205ENST00000527442 SCAF11Q99590 1463 aaKnown RBP32.67■■■□□ 2.82
PKP3-205ENST00000527442 MAP3K1Q13233 1512 aa32.67■■■□□ 2.82
PKP3-205ENST00000527442 KANK4Q5T7N3 995 aaPredicted RBP32.66■■■□□ 2.82
PKP3-205ENST00000527442 PRDM15P57071 1507 aaPredicted RBP32.66■■■□□ 2.82
PKP3-205ENST00000527442 XIRP1Q702N8 1843 aaKnown RBP32.64■■■□□ 2.82
PKP3-205ENST00000527442 ARHGAP23Q9P227 1491 aa32.63■■■□□ 2.81
PKP3-205ENST00000527442 SLIT1O75093 1534 aa32.62■■■□□ 2.81
PKP3-205ENST00000527442 SENP3Q9H4L4 574 aaPredicted RBP32.62■■■□□ 2.81
PKP3-205ENST00000527442 PHF23Q9BUL5 403 aaPredicted RBP32.6■■■□□ 2.81
PKP3-205ENST00000527442 ARHGAP31Q2M1Z3 1444 aa32.59■■■□□ 2.81
PKP3-205ENST00000527442 PIK3C2BO00750 1634 aa32.59■■■□□ 2.81
PKP3-205ENST00000527442 KIF15Q9NS87 1388 aa32.57■■■□□ 2.8
PKP3-205ENST00000527442 LTKP29376 864 aa32.56■■■□□ 2.8
PKP3-205ENST00000527442 ERBINQ96RT1 1412 aa32.55■■■□□ 2.8
PKP3-205ENST00000527442 PTPN23Q9H3S7 1636 aa32.53■■■□□ 2.8
PKP3-205ENST00000527442 ABCC5O15440 1437 aa32.52■■■□□ 2.8
PKP3-205ENST00000527442 TXNDC2Q86VQ3 553 aa32.52■■■□□ 2.8
PKP3-205ENST00000527442 KDM5AP29375 1690 aaKnown RBP32.47■■■□□ 2.79
PKP3-205ENST00000527442 RRP7BPQ9NSQ0 103 aa32.47■■■□□ 2.79
PKP3-205ENST00000527442 DAPK1P53355 1430 aa32.44■■■□□ 2.78
PKP3-205ENST00000527442 TMEM2Q9UHN6 1383 aa32.44■■■□□ 2.78
PKP3-205ENST00000527442 EFCAB6Q5THR3 1501 aa32.43■■■□□ 2.78
PKP3-205ENST00000527442 GRWD1Q9BQ67 446 aaKnown RBP eCLIP32.43■■■□□ 2.78
PKP3-205ENST00000527442 EID1Q9Y6B2 187 aa32.43■■■□□ 2.78
PKP3-205ENST00000527442 LMTK2Q8IWU2 1503 aa32.41■■■□□ 2.78
PKP3-205ENST00000527442 KANK1Q14678 1352 aa32.38■■■□□ 2.77
PKP3-205ENST00000527442 FGD6Q6ZV73 1430 aa32.35■■■□□ 2.77
PKP3-205ENST00000527442 TET3O43151 1660 aa32.35■■■□□ 2.77
PKP3-205ENST00000527442 APLP2Q06481 763 aa32.35■■■□□ 2.77
PKP3-205ENST00000527442 RGS17Q9UGC6 210 aaPredicted RBP32.34■■■□□ 2.77
PKP3-205ENST00000527442 STAG3Q9UJ98 1225 aa32.34■■■□□ 2.77
PKP3-205ENST00000527442 TMEM94Q12767 1356 aa32.33■■■□□ 2.77
PKP3-205ENST00000527442 ADGRB3O60242 1522 aa32.33■■■□□ 2.77
PKP3-205ENST00000527442 ROBO1Q9Y6N7 1651 aa32.33■■■□□ 2.77
PKP3-205ENST00000527442 FAM135BQ49AJ0 1406 aa32.33■■■□□ 2.77
PKP3-205ENST00000527442 IDI1Q13907 227 aa32.32■■■□□ 2.76
PKP3-205ENST00000527442 NWD1Q149M9 1564 aa32.3■■■□□ 2.76
PKP3-205ENST00000527442 ANKRD30AQ9BXX3 1397 aa32.3■■■□□ 2.76
PKP3-205ENST00000527442 NOS1P29475 1434 aa32.29■■■□□ 2.76
PKP3-205ENST00000527442 CHIC2Q9UKJ5 165 aa32.28■■■□□ 2.76
PKP3-205ENST00000527442 KCNA6P17658 529 aa32.26■■■□□ 2.75
PKP3-205ENST00000527442 SLC26A8Q96RN1 970 aa32.26■■■□□ 2.75
PKP3-205ENST00000527442 MYO5BQ9ULV0 1848 aa32.25■■■□□ 2.75
PKP3-205ENST00000527442 NKTRP30414 1462 aaKnown RBP32.24■■■□□ 2.75
PKP3-205ENST00000527442 RBM33Q96EV2 1170 aaKnown RBP32.23■■■□□ 2.75
PKP3-205ENST00000527442 PROSER2Q86WR7 435 aaPredicted RBP32.21■■■□□ 2.75
PKP3-205ENST00000527442 ADGRL2O95490 1459 aa32.21■■■□□ 2.75
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms