RNA–Protein interactions for RNA: ENST00000523283.5

LINC00534-202, long intergenic non-protein coding RNA 534, humanhuman

TSL 2

Gene LINC00534, Length 772 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00534-202ENST00000523283 SPRYD3Q8NCJ5 442 aa9.63□□□□□ -0.87
LINC00534-202ENST00000523283 OTUD5Q96G74 571 aa9.63□□□□□ -0.87
LINC00534-202ENST00000523283 L3MBTL3Q96JM7 780 aaPredicted RBP9.63□□□□□ -0.87
LINC00534-202ENST00000523283 MFRPQ9BY79 579 aa9.62□□□□□ -0.87
LINC00534-202ENST00000523283 PCF11O94913 1555 aaKnown RBP9.62□□□□□ -0.87
LINC00534-202ENST00000523283 TIAM1Q13009 1591 aa9.62□□□□□ -0.87
LINC00534-202ENST00000523283 SAMD9Q5K651 1589 aa9.62□□□□□ -0.87
LINC00534-202ENST00000523283 FBXO22Q8NEZ5 403 aa9.61□□□□□ -0.87
LINC00534-202ENST00000523283 PHF8Q9UPP1 1060 aa9.61□□□□□ -0.87
LINC00534-202ENST00000523283 LRRC9Q6ZRR7 1453 aa9.6□□□□□ -0.87
LINC00534-202ENST00000523283 MAMSTRQ6ZN01 415 aa9.6□□□□□ -0.87
LINC00534-202ENST00000523283 UGGT2Q9NYU1 1516 aa9.59□□□□□ -0.87
LINC00534-202ENST00000523283 MTUS2Q5JR59 1369 aa9.59□□□□□ -0.87
LINC00534-202ENST00000523283 CCNB3Q8WWL7 1395 aa9.59□□□□□ -0.87
LINC00534-202ENST00000523283 JPH4Q96JJ6 628 aa9.58□□□□□ -0.88
LINC00534-202ENST00000523283 RRBP1Q9P2E9 1410 aaKnown RBP9.57□□□□□ -0.88
LINC00534-202ENST00000523283 NKX1-1Q15270 411 aaPredicted RBP9.57□□□□□ -0.88
LINC00534-202ENST00000523283 TSHZ2Q9NRE2 1034 aa9.57□□□□□ -0.88
LINC00534-202ENST00000523283 CARMIL2Q6F5E8 1435 aa9.56□□□□□ -0.88
LINC00534-202ENST00000523283 ITGAEP38570 1179 aa9.56□□□□□ -0.88
LINC00534-202ENST00000523283 FAM50AQ14320 339 aaKnown RBP9.56□□□□□ -0.88
LINC00534-202ENST00000523283 MS4A4AQ96JQ5 239 aa9.56□□□□□ -0.88
LINC00534-202ENST00000523283 NUP160Q12769 1436 aa9.56□□□□□ -0.88
LINC00534-202ENST00000523283 CFAP43Q8NDM7 1665 aa9.55□□□□□ -0.88
LINC00534-202ENST00000523283 DPY19L2Q6NUT2 758 aa9.55□□□□□ -0.88
LINC00534-202ENST00000523283 CCDC18Q5T9S5 1454 aa9.54□□□□□ -0.88
LINC00534-202ENST00000523283 ARID3CA6NKF2 412 aa9.54□□□□□ -0.88
LINC00534-202ENST00000523283 G3V3G9 751 aa9.54□□□□□ -0.88
LINC00534-202ENST00000523283 BOLA1Q9Y3E2 137 aa9.54□□□□□ -0.88
LINC00534-202ENST00000523283 CEP170Q5SW79 1584 aa9.54□□□□□ -0.88
LINC00534-202ENST00000523283 PHLDB1Q86UU1 1377 aa9.53□□□□□ -0.88
LINC00534-202ENST00000523283 DISP1Q96F81 1524 aa9.53□□□□□ -0.88
LINC00534-202ENST00000523283 POTEJP0CG39 1038 aa9.53□□□□□ -0.88
LINC00534-202ENST00000523283 TMEM121BQ9BXQ6 578 aaPredicted RBP9.53□□□□□ -0.88
LINC00534-202ENST00000523283 SCUBE2Q9NQ36 999 aa9.53□□□□□ -0.88
LINC00534-202ENST00000523283 CDK11AQ9UQ88 783 aaPredicted RBP9.53□□□□□ -0.88
LINC00534-202ENST00000523283 KIAA0556O60303 1618 aa9.53□□□□□ -0.88
LINC00534-202ENST00000523283 GTPBP6O43824 516 aaPredicted RBP9.52□□□□□ -0.89
LINC00534-202ENST00000523283 HECW1Q76N89 1606 aa9.52□□□□□ -0.89
LINC00534-202ENST00000523283 EPRSP07814 1512 aaKnown RBP9.5□□□□□ -0.89
LINC00534-202ENST00000523283 EHBP1L1Q8N3D4 1523 aa9.48□□□□□ -0.89
LINC00534-202ENST00000523283 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.48□□□□□ -0.89
LINC00534-202ENST00000523283 PRG4Q92954 1404 aaPredicted RBP9.48□□□□□ -0.89
LINC00534-202ENST00000523283 NCOA2Q15596 1464 aa9.47□□□□□ -0.89
LINC00534-202ENST00000523283 MICALL2Q8IY33 904 aa9.47□□□□□ -0.89
LINC00534-202ENST00000523283 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.47□□□□□ -0.891e-6■□□□□ 9.9
LINC00534-202ENST00000523283 FGD6Q6ZV73 1430 aa9.47□□□□□ -0.89
LINC00534-202ENST00000523283 NBR1Q14596 966 aa9.46□□□□□ -0.9
LINC00534-202ENST00000523283 C3orf67Q6ZVT6 689 aa9.46□□□□□ -0.9
LINC00534-202ENST00000523283 PTPRGP23470 1445 aa9.46□□□□□ -0.9
LINC00534-202ENST00000523283 MYOM3Q5VTT5 1437 aa9.46□□□□□ -0.9
LINC00534-202ENST00000523283 CDK13Q14004 1512 aaKnown RBP9.46□□□□□ -0.9
LINC00534-202ENST00000523283 RAPGEF6Q8TEU7 1601 aa9.45□□□□□ -0.9
LINC00534-202ENST00000523283 SUPT6HQ7KZ85 1726 aaKnown RBP9.45□□□□□ -0.9
LINC00534-202ENST00000523283 PPP1R37O75864 691 aa9.45□□□□□ -0.9
LINC00534-202ENST00000523283 NUP153P49790 1475 aaKnown RBP9.45□□□□□ -0.9
LINC00534-202ENST00000523283 PLEKHD1A6NEE1 506 aa9.44□□□□□ -0.9
LINC00534-202ENST00000523283 PLB1Q6P1J6 1458 aa9.44□□□□□ -0.9
LINC00534-202ENST00000523283 CHD1O14646 1710 aa9.44□□□□□ -0.9
LINC00534-202ENST00000523283 SETD5Q9C0A6 1442 aa9.43□□□□□ -0.9
LINC00534-202ENST00000523283 LRRIQ1Q96JM4 1722 aa9.42□□□□□ -0.9
LINC00534-202ENST00000523283 MAGI3Q5TCQ9 1506 aa9.41□□□□□ -0.9
LINC00534-202ENST00000523283 RAB3GAP2Q9H2M9 1393 aa9.41□□□□□ -0.9
LINC00534-202ENST00000523283 CLSPNQ9HAW4 1339 aa9.41□□□□□ -0.9
LINC00534-202ENST00000523283 TROQ12816 1431 aaPredicted RBP9.4□□□□□ -0.9
LINC00534-202ENST00000523283 POTEMA6NI47 508 aa9.4□□□□□ -0.9
LINC00534-202ENST00000523283 SLAIN1Q8ND83 568 aa9.4□□□□□ -0.9
LINC00534-202ENST00000523283 MIA2Q96PC5 1412 aa9.39□□□□□ -0.91
LINC00534-202ENST00000523283 DHX57Q6P158 1386 aaKnown RBP9.39□□□□□ -0.91
LINC00534-202ENST00000523283 ARHGEF11O15085 1522 aa9.39□□□□□ -0.91
LINC00534-202ENST00000523283 ABCA8O94911 1581 aa9.38□□□□□ -0.91
LINC00534-202ENST00000523283 CFDP1Q9UEE9 299 aaPredicted RBP9.38□□□□□ -0.91
LINC00534-202ENST00000523283 UACAQ9BZF9 1416 aa9.38□□□□□ -0.91
LINC00534-202ENST00000523283 PTPN23Q9H3S7 1636 aa9.38□□□□□ -0.91
LINC00534-202ENST00000523283 POTEGQ6S5H5 508 aa9.37□□□□□ -0.91
LINC00534-202ENST00000523283 PLSCR2Q9NRY7 297 aa9.37□□□□□ -0.91
LINC00534-202ENST00000523283 ATP10BO94823 1461 aa9.36□□□□□ -0.91
LINC00534-202ENST00000523283 CHIC2Q9UKJ5 165 aa9.36□□□□□ -0.91
LINC00534-202ENST00000523283 ZNF777Q9ULD5 760 aaPredicted RBP9.36□□□□□ -0.91
LINC00534-202ENST00000523283 TCOF1Q13428 1488 aaKnown RBP9.35□□□□□ -0.91
LINC00534-202ENST00000523283 SHROOM2Q13796 1616 aa9.35□□□□□ -0.91
LINC00534-202ENST00000523283 SNPHO15079 494 aa9.34□□□□□ -0.91
LINC00534-202ENST00000523283 RRP7BPQ9NSQ0 103 aa9.34□□□□□ -0.91
LINC00534-202ENST00000523283 CLASP1Q7Z460 1538 aa9.34□□□□□ -0.91
LINC00534-202ENST00000523283 HFM1A2PYH4 1435 aa9.33□□□□□ -0.92
LINC00534-202ENST00000523283 PTPRKQ15262 1439 aa9.33□□□□□ -0.92
LINC00534-202ENST00000523283 KIF3CO14782 793 aa9.33□□□□□ -0.92
LINC00534-202ENST00000523283 PDE4AP27815 886 aa9.33□□□□□ -0.92
LINC00534-202ENST00000523283 ZNF644Q9H582 1327 aaPredicted RBP9.32□□□□□ -0.92
LINC00534-202ENST00000523283 TMEM92Q6UXU6 159 aa9.32□□□□□ -0.92
LINC00534-202ENST00000523283 TMC2Q8TDI7 906 aa9.32□□□□□ -0.92
LINC00534-202ENST00000523283 GPHNQ9NQX3 736 aaPredicted RBP9.32□□□□□ -0.92
LINC00534-202ENST00000523283 ACIN1Q9UKV3 1341 aaKnown RBP9.31□□□□□ -0.92
LINC00534-202ENST00000523283 LCE2DQ5TA82 110 aaPredicted RBP9.31□□□□□ -0.92
LINC00534-202ENST00000523283 TRIM52Q96A61 297 aa9.31□□□□□ -0.92
LINC00534-202ENST00000523283 ERCC6L2Q5T890 1561 aa9.31□□□□□ -0.92
LINC00534-202ENST00000523283 KIF14Q15058 1648 aa9.31□□□□□ -0.92
LINC00534-202ENST00000523283 GPATCH8Q9UKJ3 1502 aaKnown RBP9.31□□□□□ -0.92
LINC00534-202ENST00000523283 KCNH8Q96L42 1107 aa9.3□□□□□ -0.92
LINC00534-202ENST00000523283 ABCC2Q92887 1545 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms