RNA–Protein interactions for RNA: ENST00000523283.5

LINC00534-202, long intergenic non-protein coding RNA 534, humanhuman

TSL 2

Gene LINC00534, Length 772 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00534-202ENST00000523283 AEBP2Q6ZN18 517 aaPredicted RBP20.09■□□□□ 0.81
LINC00534-202ENST00000523283 CHIC1Q5VXU3 224 aa19.62■□□□□ 0.73
LINC00534-202ENST00000523283 PHF23Q9BUL5 403 aaPredicted RBP17.2■□□□□ 0.34
LINC00534-202ENST00000523283 SENP3Q9H4L4 574 aaPredicted RBP17.16■□□□□ 0.34
LINC00534-202ENST00000523283 PLPPR3Q6T4P5 718 aa15.93■□□□□ 0.14
LINC00534-202ENST00000523283 FOXD1Q16676 465 aa15.87■□□□□ 0.13
LINC00534-202ENST00000523283 PPP6R1Q9UPN7 881 aa15.19■□□□□ 0.02
LINC00534-202ENST00000523283 ADRA2BP18089 450 aa15.16■□□□□ 0.02
LINC00534-202ENST00000523283 PIAS4Q8N2W9 510 aaPredicted RBP14.93□□□□□ -0.02
LINC00534-202ENST00000523283 MSH5O43196 834 aa14.82□□□□□ -0.04
LINC00534-202ENST00000523283 POTEDQ86YR6 584 aa14.54□□□□□ -0.08
LINC00534-202ENST00000523283 NISCHQ9Y2I1 1504 aa14.06□□□□□ -0.16
LINC00534-202ENST00000523283 SCAF1Q9H7N4 1312 aaKnown RBP14.02□□□□□ -0.17
LINC00534-202ENST00000523283 PPP4R3CPQ6ZMV5 832 aa13.98□□□□□ -0.17
LINC00534-202ENST00000523283 MAPK8IP2Q13387 824 aaPredicted RBP13.76□□□□□ -0.21
LINC00534-202ENST00000523283 NCBP3Q53F19 620 aaKnown RBP13.67□□□□□ -0.22
LINC00534-202ENST00000523283 DMRT2Q9Y5R5 561 aa13.67□□□□□ -0.22
LINC00534-202ENST00000523283 CNKSR2Q8WXI2 1034 aa13.66□□□□□ -0.22
LINC00534-202ENST00000523283 KCNA4P22459 653 aa13.52□□□□□ -0.25
LINC00534-202ENST00000523283 RNF216Q9NWF9 866 aaPredicted RBP13.42□□□□□ -0.26
LINC00534-202ENST00000523283 NPM3O75607 178 aaKnown RBP13.38□□□□□ -0.27
LINC00534-202ENST00000523283 HOXD11P31277 338 aaPredicted RBP13.38□□□□□ -0.27
LINC00534-202ENST00000523283 DNAJC5BQ9UF47 199 aa13.16□□□□□ -0.3
LINC00534-202ENST00000523283 DCAF8L1A6NGE4 600 aa12.99□□□□□ -0.33
LINC00534-202ENST00000523283 SLC4A1APQ9BWU0 796 aaKnown RBP12.89□□□□□ -0.35
LINC00534-202ENST00000523283 CACNB1Q02641 598 aaPredicted RBP12.73□□□□□ -0.37
LINC00534-202ENST00000523283 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.71□□□□□ -0.37
LINC00534-202ENST00000523283 SLC4A2P04920 1241 aa12.65□□□□□ -0.38
LINC00534-202ENST00000523283 RNF39Q9H2S5 420 aa12.63□□□□□ -0.39
LINC00534-202ENST00000523283 FOXD4L1Q9NU39 408 aa12.52□□□□□ -0.41
LINC00534-202ENST00000523283 C1QBPQ07021 282 aaKnown RBP12.49□□□□□ -0.41
LINC00534-202ENST00000523283 U3KPZ7 1027 aaPredicted RBP12.46□□□□□ -0.41
LINC00534-202ENST00000523283 EHMT2Q96KQ7 1210 aa12.43□□□□□ -0.42
LINC00534-202ENST00000523283 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.41□□□□□ -0.42
LINC00534-202ENST00000523283 HNRNPUL2Q1KMD3 747 aaKnown RBP12.41□□□□□ -0.42
LINC00534-202ENST00000523283 ZBTB22O15209 634 aa12.4□□□□□ -0.42
LINC00534-202ENST00000523283 MYCNP04198 464 aaPredicted RBP12.4□□□□□ -0.42
LINC00534-202ENST00000523283 CSRNP3Q8WYN3 585 aa12.33□□□□□ -0.44
LINC00534-202ENST00000523283 SAMD1Q6SPF0 538 aaPredicted RBP12.32□□□□□ -0.44
LINC00534-202ENST00000523283 APLP2Q06481 763 aa12.31□□□□□ -0.44
LINC00534-202ENST00000523283 ATXN8OSP0DMR3 200 aa12.18□□□□□ -0.46
LINC00534-202ENST00000523283 CCDC180Q9P1Z9 1646 aa12.15□□□□□ -0.46
LINC00534-202ENST00000523283 CAPN15O75808 1086 aa12.1□□□□□ -0.47
LINC00534-202ENST00000523283 SPINK5Q9NQ38 1064 aaPredicted RBP12.1□□□□□ -0.47
LINC00534-202ENST00000523283 ZNF219Q9P2Y4 722 aaPredicted RBP12.09□□□□□ -0.47
LINC00534-202ENST00000523283 TRHP20396 242 aaPredicted RBP12.01□□□□□ -0.49
LINC00534-202ENST00000523283 ATF5Q9Y2D1 282 aaPredicted RBP11.98□□□□□ -0.49
LINC00534-202ENST00000523283 DSG3P32926 999 aa11.95□□□□□ -0.5
LINC00534-202ENST00000523283 POLA2Q14181 598 aa11.83□□□□□ -0.52
LINC00534-202ENST00000523283 ZCCHC6Q5VYS8 1495 aaKnown RBP11.8□□□□□ -0.52
LINC00534-202ENST00000523283 ABCB7O75027 752 aa11.79□□□□□ -0.52
LINC00534-202ENST00000523283 DCAF8L2P0C7V8 631 aa11.79□□□□□ -0.52
LINC00534-202ENST00000523283 ZBTB12Q9Y330 459 aaPredicted RBP11.71□□□□□ -0.53
LINC00534-202ENST00000523283 SHROOM4Q9ULL8 1493 aa11.64□□□□□ -0.55
LINC00534-202ENST00000523283 FBLN2P98095 1184 aa11.59□□□□□ -0.55
LINC00534-202ENST00000523283 DCAF1Q9Y4B6 1507 aa11.59□□□□□ -0.55
LINC00534-202ENST00000523283 ABCC9O60706 1549 aa11.54□□□□□ -0.56
LINC00534-202ENST00000523283 MKRN4PQ13434 485 aaPredicted RBP11.48□□□□□ -0.57
LINC00534-202ENST00000523283 RBM42Q9BTD8 480 aaKnown RBP11.44□□□□□ -0.58
LINC00534-202ENST00000523283 MYO15BQ96JP2 1530 aa11.42□□□□□ -0.58
LINC00534-202ENST00000523283 POTEHQ6S545 545 aa11.39□□□□□ -0.59
LINC00534-202ENST00000523283 SPDYE2BA6NHP3 402 aa11.37□□□□□ -0.59
LINC00534-202ENST00000523283 SPDYE6P0CI01 402 aa11.37□□□□□ -0.59
LINC00534-202ENST00000523283 SPDYE2Q495Y8 402 aa11.37□□□□□ -0.59
LINC00534-202ENST00000523283 NACADO15069 1562 aa11.37□□□□□ -0.59
LINC00534-202ENST00000523283 OSCARQ8IYS5 282 aa11.36□□□□□ -0.59
LINC00534-202ENST00000523283 SUPT5HO00267 1087 aaKnown RBP11.29□□□□□ -0.6
LINC00534-202ENST00000523283 AKT1S1Q96B36 256 aa11.28□□□□□ -0.6
LINC00534-202ENST00000523283 ZNF692Q9BU19 519 aaPredicted RBP11.28□□□□□ -0.6
LINC00534-202ENST00000523283 RB1CC1Q8TDY2 1594 aa11.26□□□□□ -0.61
LINC00534-202ENST00000523283 SCRIBQ14160 1630 aa11.26□□□□□ -0.61
LINC00534-202ENST00000523283 SPDYE4A6NLX3 237 aa11.24□□□□□ -0.61
LINC00534-202ENST00000523283 SSUH2Q9Y2M2 353 aa11.23□□□□□ -0.61
LINC00534-202ENST00000523283 SLC24A1O60721 1099 aa11.15□□□□□ -0.62
LINC00534-202ENST00000523283 FKBP8Q14318 412 aa11.12□□□□□ -0.63
LINC00534-202ENST00000523283 REM2Q8IYK8 340 aaPredicted RBP11.12□□□□□ -0.63
LINC00534-202ENST00000523283 PABPN1Q86U42 306 aaKnown RBP eCLIP11.09□□□□□ -0.63
LINC00534-202ENST00000523283 AMER1Q5JTC6 1135 aaPredicted RBP11.07□□□□□ -0.64
LINC00534-202ENST00000523283 PROM2Q8N271 834 aa11.07□□□□□ -0.64
LINC00534-202ENST00000523283 CHRDL2Q6WN34 429 aa11.04□□□□□ -0.64
LINC00534-202ENST00000523283 SPDYE1Q8NFV5 336 aaPredicted RBP11.04□□□□□ -0.64
LINC00534-202ENST00000523283 RTN4Q9NQC3 1192 aaKnown RBP11.04□□□□□ -0.64
LINC00534-202ENST00000523283 STAG3Q9UJ98 1225 aa11□□□□□ -0.65
LINC00534-202ENST00000523283 RSF1Q96T23 1441 aaPredicted RBP10.97□□□□□ -0.65
LINC00534-202ENST00000523283 PITPNM1O00562 1244 aa10.95□□□□□ -0.66
LINC00534-202ENST00000523283 CECR2Q9BXF3 1484 aa10.93□□□□□ -0.66
LINC00534-202ENST00000523283 CLEC11AQ9Y240 323 aa10.92□□□□□ -0.66
LINC00534-202ENST00000523283 UNC13AQ9UPW8 1703 aa10.91□□□□□ -0.66
LINC00534-202ENST00000523283 PRR29P0C7W0 189 aa10.87□□□□□ -0.67
LINC00534-202ENST00000523283 FBXO3Q9UK99 471 aa10.87□□□□□ -0.67
LINC00534-202ENST00000523283 MROH2BQ7Z745 1585 aa10.86□□□□□ -0.67
LINC00534-202ENST00000523283 BAZ1AQ9NRL2 1556 aaPredicted RBP10.86□□□□□ -0.67
LINC00534-202ENST00000523283 BICRAQ9NZM4 1560 aa10.85□□□□□ -0.67
LINC00534-202ENST00000523283 FXR2P51116 673 aaKnown RBP eCLIP10.83□□□□□ -0.68
LINC00534-202ENST00000523283 SMARCA4P51532 1647 aa10.76□□□□□ -0.69
LINC00534-202ENST00000523283 PIP4P2Q8N4L2 257 aa10.76□□□□□ -0.69
LINC00534-202ENST00000523283 WIZO95785 1651 aa10.76□□□□□ -0.69
LINC00534-202ENST00000523283 PLEKHG5O94827 1062 aa10.69□□□□□ -0.7
LINC00534-202ENST00000523283 PRKAR2AP13861 404 aaKnown RBP10.69□□□□□ -0.7
LINC00534-202ENST00000523283 CREBZFQ9NS37 354 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms