RNA–Protein interactions for RNA: ENST00000514528.5

MATR3-225, Transcript of matrin 3, humanhuman

TSL 4

Gene MATR3, Length 532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-225ENST00000514528 CCDC141Q6ZP82 1450 aa27.33■■□□□ 1.97
MATR3-225ENST00000514528 PZPP20742 1482 aa27.32■■□□□ 1.96
MATR3-225ENST00000514528 TNRQ92752 1358 aa27.31■■□□□ 1.96
MATR3-225ENST00000514528 KDM5DQ9BY66 1539 aa27.31■■□□□ 1.96
MATR3-225ENST00000514528 NEURL4Q96JN8 1562 aa27.3■■□□□ 1.96
MATR3-225ENST00000514528 RSPH4AQ5TD94 716 aa27.29■■□□□ 1.96
MATR3-225ENST00000514528 FBXO31Q5XUX0 539 aaPredicted RBP27.29■■□□□ 1.96
MATR3-225ENST00000514528 NCOA2Q15596 1464 aa27.29■■□□□ 1.96
MATR3-225ENST00000514528 CAMSAP2Q08AD1 1489 aa27.28■■□□□ 1.96
MATR3-225ENST00000514528 KIF3BO15066 747 aa27.28■■□□□ 1.96
MATR3-225ENST00000514528 CPS1P31327 1500 aa27.23■■□□□ 1.95
MATR3-225ENST00000514528 MIA2Q96PC5 1412 aa27.23■■□□□ 1.95
MATR3-225ENST00000514528 ARHGEF5Q12774 1597 aa27.22■■□□□ 1.95
MATR3-225ENST00000514528 NLRP1Q9C000 1473 aa27.21■■□□□ 1.95
MATR3-225ENST00000514528 SHANK2Q9UPX8 1470 aa27.21■■□□□ 1.95
MATR3-225ENST00000514528 WASHC2CQ9Y4E1 1318 aa27.2■■□□□ 1.95
MATR3-225ENST00000514528 MED14O60244 1454 aa27.19■■□□□ 1.94
MATR3-225ENST00000514528 POLR1AO95602 1720 aaPredicted RBP27.19■■□□□ 1.94
MATR3-225ENST00000514528 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.17■■□□□ 1.948e-25■■■□□ 16.6
MATR3-225ENST00000514528 VWDEQ8N2E2 1590 aa27.17■■□□□ 1.94
MATR3-225ENST00000514528 THEMISQ8N1K5 641 aaPredicted RBP27.16■■□□□ 1.94
MATR3-225ENST00000514528 ANKLE2Q86XL3 938 aa27.15■■□□□ 1.94
MATR3-225ENST00000514528 DEPDC5O75140 1603 aa27.14■■□□□ 1.94
MATR3-225ENST00000514528 UGGT1Q9NYU2 1555 aa27.14■■□□□ 1.93
MATR3-225ENST00000514528 RNF17Q9BXT8 1623 aaKnown RBP27.12■■□□□ 1.93
MATR3-225ENST00000514528 HSPA1LP34931 641 aa27.12■■□□□ 1.93
MATR3-225ENST00000514528 MAST1Q9Y2H9 1570 aa27.11■■□□□ 1.93
MATR3-225ENST00000514528 NPHP4O75161 1426 aaPredicted RBP27.11■■□□□ 1.93
MATR3-225ENST00000514528 ALKQ9UM73 1620 aa27.11■■□□□ 1.93
MATR3-225ENST00000514528 ABCC3O15438 1527 aa27.11■■□□□ 1.93
MATR3-225ENST00000514528 TOM1O60784 492 aa27.1■■□□□ 1.93
MATR3-225ENST00000514528 TSPY4P0CV99 314 aa27.1■■□□□ 1.93
MATR3-225ENST00000514528 TSPY10P0CW01 314 aa27.1■■□□□ 1.93
MATR3-225ENST00000514528 LRRC9Q6ZRR7 1453 aa27.09■■□□□ 1.93
MATR3-225ENST00000514528 MROH1Q8NDA8 1641 aa27.05■■□□□ 1.92
MATR3-225ENST00000514528 VPS8Q8N3P4 1428 aa27.04■■□□□ 1.92
MATR3-225ENST00000514528 ERVK-7P63135 1459 aa27.04■■□□□ 1.92
MATR3-225ENST00000514528 MED1Q15648 1581 aaPredicted RBP27.04■■□□□ 1.92
MATR3-225ENST00000514528 ZC3H13Q5T200 1668 aaKnown RBP27.04■■□□□ 1.92
MATR3-225ENST00000514528 PIP4K2BP78356 416 aa27.03■■□□□ 1.92
MATR3-225ENST00000514528 EIF2AK4Q9P2K8 1649 aaKnown RBP27.03■■□□□ 1.92
MATR3-225ENST00000514528 MAP3K1Q13233 1512 aa27■■□□□ 1.91
MATR3-225ENST00000514528 IQGAP1P46940 1657 aa26.99■■□□□ 1.91
MATR3-225ENST00000514528 SCAF1Q9H7N4 1312 aaKnown RBP26.98■■□□□ 1.91
MATR3-225ENST00000514528 LRRC7Q96NW7 1537 aa26.98■■□□□ 1.91
MATR3-225ENST00000514528 MYOM3Q5VTT5 1437 aa26.96■■□□□ 1.91
MATR3-225ENST00000514528 KANK4Q5T7N3 995 aaPredicted RBP26.95■■□□□ 1.9
MATR3-225ENST00000514528 ARHGAP31Q2M1Z3 1444 aa26.94■■□□□ 1.9
MATR3-225ENST00000514528 STRCP1A6NGW2 1772 aa26.94■■□□□ 1.9
MATR3-225ENST00000514528 ARHGAP23Q9P227 1491 aa26.93■■□□□ 1.9
MATR3-225ENST00000514528 DUOX2Q9NRD8 1548 aa26.93■■□□□ 1.9
MATR3-225ENST00000514528 SYNMO15061 1565 aa26.92■■□□□ 1.9
MATR3-225ENST00000514528 SLIT1O75093 1534 aa26.9■■□□□ 1.9
MATR3-225ENST00000514528 SCAF11Q99590 1463 aaKnown RBP26.9■■□□□ 1.9
MATR3-225ENST00000514528 UBR1Q8IWV7 1749 aa26.9■■□□□ 1.9
MATR3-225ENST00000514528 PRDM15P57071 1507 aaPredicted RBP26.9■■□□□ 1.9
MATR3-225ENST00000514528 LTKP29376 864 aa26.87■■□□□ 1.89
MATR3-225ENST00000514528 ERBINQ96RT1 1412 aa26.86■■□□□ 1.89
MATR3-225ENST00000514528 CEP152O94986 1710 aa26.85■■□□□ 1.89
MATR3-225ENST00000514528 KIF15Q9NS87 1388 aa26.84■■□□□ 1.89
MATR3-225ENST00000514528 ABCC5O15440 1437 aa26.84■■□□□ 1.89
MATR3-225ENST00000514528 LOC105371045A0A1W2PR82 267 aa26.8■■□□□ 1.88
MATR3-225ENST00000514528 TXNDC2Q86VQ3 553 aa26.79■■□□□ 1.88
MATR3-225ENST00000514528 TMEM2Q9UHN6 1383 aa26.77■■□□□ 1.88
MATR3-225ENST00000514528 LMTK2Q8IWU2 1503 aa26.76■■□□□ 1.87
MATR3-225ENST00000514528 CROCC2H7BZ55 1655 aa26.75■■□□□ 1.87
MATR3-225ENST00000514528 RRP7BPQ9NSQ0 103 aa26.74■■□□□ 1.87
MATR3-225ENST00000514528 DAPK1P53355 1430 aa26.73■■□□□ 1.87
MATR3-225ENST00000514528 PHF23Q9BUL5 403 aaPredicted RBP26.72■■□□□ 1.87
MATR3-225ENST00000514528 PIK3C2BO00750 1634 aa26.72■■□□□ 1.87
MATR3-225ENST00000514528 EID1Q9Y6B2 187 aa26.71■■□□□ 1.87
MATR3-225ENST00000514528 PTPN23Q9H3S7 1636 aa26.71■■□□□ 1.87
MATR3-225ENST00000514528 KDM5AP29375 1690 aaKnown RBP26.7■■□□□ 1.87
MATR3-225ENST00000514528 FAM135BQ49AJ0 1406 aa26.7■■□□□ 1.86
MATR3-225ENST00000514528 XIRP1Q702N8 1843 aaKnown RBP26.69■■□□□ 1.86
MATR3-225ENST00000514528 FGD6Q6ZV73 1430 aa26.68■■□□□ 1.86
MATR3-225ENST00000514528 RGS17Q9UGC6 210 aaPredicted RBP26.68■■□□□ 1.86
MATR3-225ENST00000514528 TET3O43151 1660 aa26.67■■□□□ 1.86
MATR3-225ENST00000514528 NOS1P29475 1434 aa26.67■■□□□ 1.86
MATR3-225ENST00000514528 EFCAB6Q5THR3 1501 aa26.67■■□□□ 1.86
MATR3-225ENST00000514528 IDI1Q13907 227 aa26.67■■□□□ 1.86
MATR3-225ENST00000514528 KANK1Q14678 1352 aa26.67■■□□□ 1.86
MATR3-225ENST00000514528 CFAP65Q6ZU64 1925 aaKnown RBP26.65■■□□□ 1.86
MATR3-225ENST00000514528 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.65■■□□□ 1.861e-9■■□□□ 12.3
MATR3-225ENST00000514528 TMEM94Q12767 1356 aa26.64■■□□□ 1.86
MATR3-225ENST00000514528 KCNA6P17658 529 aa26.63■■□□□ 1.85
MATR3-225ENST00000514528 ANKRD30AQ9BXX3 1397 aa26.62■■□□□ 1.85
MATR3-225ENST00000514528 SENP3Q9H4L4 574 aaPredicted RBP26.62■■□□□ 1.85
MATR3-225ENST00000514528 ADGRL2O95490 1459 aa26.59■■□□□ 1.85
MATR3-225ENST00000514528 ADGRB3O60242 1522 aa26.58■■□□□ 1.85
MATR3-225ENST00000514528 STAG3Q9UJ98 1225 aa26.57■■□□□ 1.84
MATR3-225ENST00000514528 NWD1Q149M9 1564 aa26.57■■□□□ 1.84
MATR3-225ENST00000514528 NKTRP30414 1462 aaKnown RBP26.56■■□□□ 1.84
MATR3-225ENST00000514528 SLC26A8Q96RN1 970 aa26.55■■□□□ 1.84
MATR3-225ENST00000514528 SLC52A1Q9NWF4 448 aa26.55■■□□□ 1.84
MATR3-225ENST00000514528 CHIC2Q9UKJ5 165 aa26.55■■□□□ 1.84
MATR3-225ENST00000514528 RPRD2Q5VT52 1461 aaKnown RBP26.53■■□□□ 1.84
MATR3-225ENST00000514528 ZFYVE9O95405 1425 aa26.52■■□□□ 1.84
MATR3-225ENST00000514528 APLP2Q06481 763 aa26.5■■□□□ 1.83
MATR3-225ENST00000514528 PROSER2Q86WR7 435 aaPredicted RBP26.5■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 81.9 ms