RNA–Protein interactions for RNA: ENST00000514528.5

MATR3-225, Transcript of matrin 3, humanhuman

TSL 4

Gene MATR3, Length 532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-225ENST00000514528 NISCHQ9Y2I1 1504 aa43.2■■■■■ 4.51
MATR3-225ENST00000514528 ABCC9O60706 1549 aa39.1■■■■□ 3.85
MATR3-225ENST00000514528 CCDC180Q9P1Z9 1646 aa38.85■■■■□ 3.81
MATR3-225ENST00000514528 RB1CC1Q8TDY2 1594 aa37.11■■■■□ 3.53
MATR3-225ENST00000514528 DNAJC5BQ9UF47 199 aa37.07■■■■□ 3.52
MATR3-225ENST00000514528 NACADO15069 1562 aa36.83■■■■□ 3.49
MATR3-225ENST00000514528 MYO15BQ96JP2 1530 aa36.35■■■■□ 3.41
MATR3-225ENST00000514528 DCAF8L2P0C7V8 631 aa36.35■■■■□ 3.41
MATR3-225ENST00000514528 PABPN1Q86U42 306 aaKnown RBP eCLIP36.35■■■■□ 3.41
MATR3-225ENST00000514528 UNC13AQ9UPW8 1703 aa36.17■■■■□ 3.38
MATR3-225ENST00000514528 BICRAQ9NZM4 1560 aa36.13■■■■□ 3.37
MATR3-225ENST00000514528 ZCCHC6Q5VYS8 1495 aaKnown RBP35.77■■■■□ 3.32
MATR3-225ENST00000514528 DCAF1Q9Y4B6 1507 aa35.74■■■■□ 3.31
MATR3-225ENST00000514528 SHROOM4Q9ULL8 1493 aa35.67■■■■□ 3.3
MATR3-225ENST00000514528 CC2D2AQ9P2K1 1620 aa35.32■■■■□ 3.25
MATR3-225ENST00000514528 CECR2Q9BXF3 1484 aa35.3■■■■□ 3.24
MATR3-225ENST00000514528 SCRIBQ14160 1630 aa35.29■■■■□ 3.24
MATR3-225ENST00000514528 EIF4G1Q04637 1599 aaKnown RBP35.21■■■■□ 3.23
MATR3-225ENST00000514528 DNAJC5Q9H3Z4 198 aa34.26■■■■□ 3.08
MATR3-225ENST00000514528 NCAPD3P42695 1498 aa34.08■■■■□ 3.05
MATR3-225ENST00000514528 CUX2O14529 1486 aa33.91■■■■□ 3.02
MATR3-225ENST00000514528 ATAD2BQ9ULI0 1458 aa33.89■■■■□ 3.02
MATR3-225ENST00000514528 HMGXB3Q12766 1538 aa33.75■■■□□ 2.99
MATR3-225ENST00000514528 ERCC6Q03468 1493 aa33.74■■■□□ 2.99
MATR3-225ENST00000514528 SMARCA2P51531 1590 aa33.73■■■□□ 2.99
MATR3-225ENST00000514528 SMARCA4P51532 1647 aa33.71■■■□□ 2.99
MATR3-225ENST00000514528 NESP48681 1621 aa33.53■■■□□ 2.96
MATR3-225ENST00000514528 BAZ1AQ9NRL2 1556 aaPredicted RBP33.51■■■□□ 2.96
MATR3-225ENST00000514528 PEG3Q9GZU2 1588 aa33.5■■■□□ 2.95
MATR3-225ENST00000514528 BAZ1BQ9UIG0 1483 aaKnown RBP33.47■■■□□ 2.95
MATR3-225ENST00000514528 THOC2Q8NI27 1593 aaKnown RBP33.29■■■□□ 2.92
MATR3-225ENST00000514528 MROH2BQ7Z745 1585 aa33.26■■■□□ 2.92
MATR3-225ENST00000514528 LAMC3Q9Y6N6 1575 aa33.26■■■□□ 2.92
MATR3-225ENST00000514528 PDS5BQ9NTI5 1447 aa33.1■■■□□ 2.89
MATR3-225ENST00000514528 KIF21AQ7Z4S6 1674 aa33.01■■■□□ 2.87
MATR3-225ENST00000514528 CADPSQ9ULU8 1353 aa32.98■■■□□ 2.87
MATR3-225ENST00000514528 MRC2Q9UBG0 1479 aa32.83■■■□□ 2.85
MATR3-225ENST00000514528 WDR62O43379 1518 aa32.79■■■□□ 2.84
MATR3-225ENST00000514528 WIZO95785 1651 aa32.76■■■□□ 2.84
MATR3-225ENST00000514528 CEP164Q9UPV0 1460 aa32.61■■■□□ 2.81
MATR3-225ENST00000514528 CFTRP13569 1480 aa32.57■■■□□ 2.8
MATR3-225ENST00000514528 FANCD2Q9BXW9 1451 aa32.56■■■□□ 2.8
MATR3-225ENST00000514528 RSF1Q96T23 1441 aaPredicted RBP32.5■■■□□ 2.79
MATR3-225ENST00000514528 TRIM41Q8WV44 630 aa32.43■■■□□ 2.78
MATR3-225ENST00000514528 TOP2AP11388 1531 aaKnown RBP32.41■■■□□ 2.78
MATR3-225ENST00000514528 URB2Q14146 1524 aaKnown RBP32.35■■■□□ 2.77
MATR3-225ENST00000514528 OSCARQ8IYS5 282 aa32.25■■■□□ 2.75
MATR3-225ENST00000514528 CCDC88BA6NC98 1476 aa32.05■■■□□ 2.72
MATR3-225ENST00000514528 PRDM2Q13029 1718 aa32.01■■■□□ 2.72
MATR3-225ENST00000514528 IFT140Q96RY7 1462 aa32■■■□□ 2.71
MATR3-225ENST00000514528 ZNF608Q9ULD9 1512 aaPredicted RBP31.98■■■□□ 2.71
MATR3-225ENST00000514528 TOPBP1Q92547 1522 aa31.92■■■□□ 2.7
MATR3-225ENST00000514528 RIMBP3CA6NJZ7 1639 aa31.84■■■□□ 2.69
MATR3-225ENST00000514528 RIMBP3BA6NNM3 1639 aa31.84■■■□□ 2.69
MATR3-225ENST00000514528 RIMBP3Q9UFD9 1639 aa31.84■■■□□ 2.69
MATR3-225ENST00000514528 ABCC8Q09428 1581 aa31.83■■■□□ 2.69
MATR3-225ENST00000514528 ARHGEF11O15085 1522 aa31.76■■■□□ 2.68
MATR3-225ENST00000514528 DNMBPQ6XZF7 1577 aa31.76■■■□□ 2.67
MATR3-225ENST00000514528 EIF4G3O43432 1585 aaKnown RBP31.74■■■□□ 2.67
MATR3-225ENST00000514528 TARBP1Q13395 1621 aaKnown RBP31.67■■■□□ 2.66
MATR3-225ENST00000514528 AQRO60306 1485 aaKnown RBP eCLIP31.63■■■□□ 2.654e-7■■■■□ 24.2
MATR3-225ENST00000514528 POLA1P09884 1462 aaPredicted RBP31.59■■■□□ 2.65
MATR3-225ENST00000514528 CHD1O14646 1710 aa31.47■■■□□ 2.63
MATR3-225ENST00000514528 CYB5RLQ6IPT4 315 aa31.47■■■□□ 2.63
MATR3-225ENST00000514528 ARAP1Q96P48 1450 aa31.46■■■□□ 2.63
MATR3-225ENST00000514528 RAD54L2Q9Y4B4 1467 aa31.45■■■□□ 2.62
MATR3-225ENST00000514528 SOGA1O94964 1423 aa31.41■■■□□ 2.62
MATR3-225ENST00000514528 TDRD9Q8NDG6 1382 aaKnown RBP31.38■■■□□ 2.61
MATR3-225ENST00000514528 WDR97A6NE52 1622 aa31.35■■■□□ 2.61
MATR3-225ENST00000514528 FBLN2P98095 1184 aa31.34■■■□□ 2.61
MATR3-225ENST00000514528 FGD5Q6ZNL6 1462 aa31.32■■■□□ 2.6
MATR3-225ENST00000514528 SNAPC4Q5SXM2 1469 aa31.29■■■□□ 2.6
MATR3-225ENST00000514528 CLASP1Q7Z460 1538 aa31.28■■■□□ 2.6
MATR3-225ENST00000514528 CUX1P39880 1505 aa31.27■■■□□ 2.6
MATR3-225ENST00000514528 MAGI1Q96QZ7 1491 aaPredicted RBP31.23■■■□□ 2.59
MATR3-225ENST00000514528 GRIN2BQ13224 1484 aa31.19■■■□□ 2.58
MATR3-225ENST00000514528 TRHP20396 242 aaPredicted RBP31.14■■■□□ 2.58
MATR3-225ENST00000514528 CHMP7Q8WUX9 453 aaPredicted RBP31.14■■■□□ 2.58
MATR3-225ENST00000514528 SYNJ2O15056 1496 aa31.14■■■□□ 2.57
MATR3-225ENST00000514528 SYNJ1O43426 1573 aa31.13■■■□□ 2.57
MATR3-225ENST00000514528 GAPVD1Q14C86 1478 aa31.02■■■□□ 2.56
MATR3-225ENST00000514528 ABCA10Q8WWZ4 1543 aa31■■■□□ 2.55
MATR3-225ENST00000514528 ABCA5Q8WWZ7 1642 aa30.95■■■□□ 2.54
MATR3-225ENST00000514528 PBRM1Q86U86 1689 aa30.92■■■□□ 2.54
MATR3-225ENST00000514528 GRIN2AQ12879 1464 aa30.79■■■□□ 2.52
MATR3-225ENST00000514528 WRNQ14191 1432 aaPredicted RBP eCLIP30.77■■■□□ 2.526e-9■■■■■ 30.6
MATR3-225ENST00000514528 NUP160Q12769 1436 aa30.76■■■□□ 2.51
MATR3-225ENST00000514528 ADAMTS12P58397 1594 aa30.72■■■□□ 2.51
MATR3-225ENST00000514528 ERCC6L2Q5T890 1561 aa30.71■■■□□ 2.51
MATR3-225ENST00000514528 CEP170Q5SW79 1584 aa30.68■■■□□ 2.5
MATR3-225ENST00000514528 TOP2BQ02880 1626 aa30.66■■■□□ 2.5
MATR3-225ENST00000514528 BIVM-ERCC5R4GMW8 1640 aa30.65■■■□□ 2.5
MATR3-225ENST00000514528 FHAD1B1AJZ9 1412 aa30.64■■■□□ 2.5
MATR3-225ENST00000514528 SUPT5HO00267 1087 aaKnown RBP30.62■■■□□ 2.49
MATR3-225ENST00000514528 SHROOM2Q13796 1616 aa30.62■■■□□ 2.49
MATR3-225ENST00000514528 ERICH3Q5RHP9 1530 aa30.58■■■□□ 2.49
MATR3-225ENST00000514528 AEBP2Q6ZN18 517 aaPredicted RBP30.42■■■□□ 2.46
MATR3-225ENST00000514528 PRG4Q92954 1404 aaPredicted RBP30.4■■■□□ 2.46
MATR3-225ENST00000514528 JPH4Q96JJ6 628 aa30.36■■■□□ 2.45
MATR3-225ENST00000514528 RUSC2Q8N2Y8 1516 aa30.3■■■□□ 2.44
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms