RNA–Protein interactions for RNA: ENST00000469400.1

TRAPPC12-216, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 720 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-216ENST00000469400 SCAF1Q9H7N4 1312 aaKnown RBP20.74■□□□□ 0.91
TRAPPC12-216ENST00000469400 KIF3BO15066 747 aa20.73■□□□□ 0.91
TRAPPC12-216ENST00000469400 PIP4K2BP78356 416 aa20.73■□□□□ 0.91
TRAPPC12-216ENST00000469400 TOM1O60784 492 aa20.72■□□□□ 0.91
TRAPPC12-216ENST00000469400 SHANK2Q9UPX8 1470 aa20.7■□□□□ 0.9
TRAPPC12-216ENST00000469400 CPS1P31327 1500 aa20.69■□□□□ 0.9
TRAPPC12-216ENST00000469400 NEURL4Q96JN8 1562 aa20.69■□□□□ 0.9
TRAPPC12-216ENST00000469400 ANKLE2Q86XL3 938 aa20.69■□□□□ 0.9
TRAPPC12-216ENST00000469400 WASHC2CQ9Y4E1 1318 aa20.69■□□□□ 0.9
TRAPPC12-216ENST00000469400 CEP162Q5TB80 1403 aa20.69■□□□□ 0.9
TRAPPC12-216ENST00000469400 PZPP20742 1482 aa20.69■□□□□ 0.9
TRAPPC12-216ENST00000469400 EHBP1L1Q8N3D4 1523 aa20.68■□□□□ 0.9
TRAPPC12-216ENST00000469400 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.67■□□□□ 0.9
TRAPPC12-216ENST00000469400 KDM5DQ9BY66 1539 aa20.67■□□□□ 0.9
TRAPPC12-216ENST00000469400 THEMISQ8N1K5 641 aaPredicted RBP20.66■□□□□ 0.9
TRAPPC12-216ENST00000469400 POLR1AO95602 1720 aaPredicted RBP20.65■□□□□ 0.9
TRAPPC12-216ENST00000469400 CCDC141Q6ZP82 1450 aa20.65■□□□□ 0.9
TRAPPC12-216ENST00000469400 MIA2Q96PC5 1412 aa20.65■□□□□ 0.9
TRAPPC12-216ENST00000469400 RSPH4AQ5TD94 716 aa20.65■□□□□ 0.9
TRAPPC12-216ENST00000469400 MED1Q15648 1581 aaPredicted RBP20.64■□□□□ 0.9
TRAPPC12-216ENST00000469400 FAM135AQ9P2D6 1515 aa20.64■□□□□ 0.9
TRAPPC12-216ENST00000469400 VWDEQ8N2E2 1590 aa20.62■□□□□ 0.89
TRAPPC12-216ENST00000469400 CAMSAP2Q08AD1 1489 aa20.62■□□□□ 0.89
TRAPPC12-216ENST00000469400 NLRP1Q9C000 1473 aa20.62■□□□□ 0.89
TRAPPC12-216ENST00000469400 NPHP4O75161 1426 aaPredicted RBP20.61■□□□□ 0.89
TRAPPC12-216ENST00000469400 UGGT1Q9NYU2 1555 aa20.6■□□□□ 0.89
TRAPPC12-216ENST00000469400 MED14O60244 1454 aa20.6■□□□□ 0.89
TRAPPC12-216ENST00000469400 NCOA2Q15596 1464 aa20.6■□□□□ 0.89
TRAPPC12-216ENST00000469400 TSPY4P0CV99 314 aa20.57■□□□□ 0.88
TRAPPC12-216ENST00000469400 TSPY10P0CW01 314 aa20.57■□□□□ 0.88
TRAPPC12-216ENST00000469400 DEPDC5O75140 1603 aa20.56■□□□□ 0.88
TRAPPC12-216ENST00000469400 ALKQ9UM73 1620 aa20.56■□□□□ 0.88
TRAPPC12-216ENST00000469400 PHF23Q9BUL5 403 aaPredicted RBP20.54■□□□□ 0.88
TRAPPC12-216ENST00000469400 ARHGEF5Q12774 1597 aa20.52■□□□□ 0.88
TRAPPC12-216ENST00000469400 IQGAP1P46940 1657 aa20.51■□□□□ 0.87
TRAPPC12-216ENST00000469400 ABCC3O15438 1527 aa20.5■□□□□ 0.87
TRAPPC12-216ENST00000469400 LRRC7Q96NW7 1537 aa20.5■□□□□ 0.87
TRAPPC12-216ENST00000469400 SENP3Q9H4L4 574 aaPredicted RBP20.5■□□□□ 0.87
TRAPPC12-216ENST00000469400 RNF17Q9BXT8 1623 aaKnown RBP20.47■□□□□ 0.87
TRAPPC12-216ENST00000469400 ERVK-7P63135 1459 aa20.47■□□□□ 0.87
TRAPPC12-216ENST00000469400 STRCP1A6NGW2 1772 aa20.46■□□□□ 0.87
TRAPPC12-216ENST00000469400 ZC3H13Q5T200 1668 aaKnown RBP20.43■□□□□ 0.86
TRAPPC12-216ENST00000469400 MAST1Q9Y2H9 1570 aa20.42■□□□□ 0.86
TRAPPC12-216ENST00000469400 LTKP29376 864 aa20.42■□□□□ 0.86
TRAPPC12-216ENST00000469400 SYNMO15061 1565 aa20.42■□□□□ 0.86
TRAPPC12-216ENST00000469400 LRRC9Q6ZRR7 1453 aa20.41■□□□□ 0.86
TRAPPC12-216ENST00000469400 SCAF11Q99590 1463 aaKnown RBP20.41■□□□□ 0.86
TRAPPC12-216ENST00000469400 TXNDC2Q86VQ3 553 aa20.4■□□□□ 0.86
TRAPPC12-216ENST00000469400 MROH1Q8NDA8 1641 aa20.4■□□□□ 0.86
TRAPPC12-216ENST00000469400 EIF2AK4Q9P2K8 1649 aaKnown RBP20.39■□□□□ 0.86
TRAPPC12-216ENST00000469400 UBR1Q8IWV7 1749 aa20.38■□□□□ 0.85
TRAPPC12-216ENST00000469400 RGS17Q9UGC6 210 aaPredicted RBP20.37■□□□□ 0.85
TRAPPC12-216ENST00000469400 ARHGAP23Q9P227 1491 aa20.37■□□□□ 0.85
TRAPPC12-216ENST00000469400 KANK4Q5T7N3 995 aaPredicted RBP20.36■□□□□ 0.85
TRAPPC12-216ENST00000469400 SLIT1O75093 1534 aa20.35■□□□□ 0.85
TRAPPC12-216ENST00000469400 CFAP65Q6ZU64 1925 aaKnown RBP20.35■□□□□ 0.85
TRAPPC12-216ENST00000469400 DUOX2Q9NRD8 1548 aa20.34■□□□□ 0.85
TRAPPC12-216ENST00000469400 CEP152O94986 1710 aa20.34■□□□□ 0.85
TRAPPC12-216ENST00000469400 EID1Q9Y6B2 187 aa20.34■□□□□ 0.85
TRAPPC12-216ENST00000469400 ARHGAP31Q2M1Z3 1444 aa20.34■□□□□ 0.85
TRAPPC12-216ENST00000469400 MYOM3Q5VTT5 1437 aa20.34■□□□□ 0.85
TRAPPC12-216ENST00000469400 VPS8Q8N3P4 1428 aa20.34■□□□□ 0.85
TRAPPC12-216ENST00000469400 KIF15Q9NS87 1388 aa20.31■□□□□ 0.84
TRAPPC12-216ENST00000469400 RRP7BPQ9NSQ0 103 aa20.3■□□□□ 0.84
TRAPPC12-216ENST00000469400 TMEM2Q9UHN6 1383 aa20.3■□□□□ 0.84
TRAPPC12-216ENST00000469400 FAM135BQ49AJ0 1406 aa20.29■□□□□ 0.84
TRAPPC12-216ENST00000469400 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.29■□□□□ 0.844e-9■□□□□ 9.3
TRAPPC12-216ENST00000469400 PRDM15P57071 1507 aaPredicted RBP20.28■□□□□ 0.84
TRAPPC12-216ENST00000469400 STAG3Q9UJ98 1225 aa20.28■□□□□ 0.84
TRAPPC12-216ENST00000469400 ERBINQ96RT1 1412 aa20.27■□□□□ 0.84
TRAPPC12-216ENST00000469400 XIRP1Q702N8 1843 aaKnown RBP20.27■□□□□ 0.84
TRAPPC12-216ENST00000469400 MAP3K1Q13233 1512 aa20.27■□□□□ 0.83
TRAPPC12-216ENST00000469400 TMEM94Q12767 1356 aa20.26■□□□□ 0.83
TRAPPC12-216ENST00000469400 ABCC5O15440 1437 aa20.26■□□□□ 0.83
TRAPPC12-216ENST00000469400 KCNA6P17658 529 aa20.25■□□□□ 0.83
TRAPPC12-216ENST00000469400 PIK3C2BO00750 1634 aa20.24■□□□□ 0.83
TRAPPC12-216ENST00000469400 IDI1Q13907 227 aa20.24■□□□□ 0.83
TRAPPC12-216ENST00000469400 LOC105371045A0A1W2PR82 267 aa20.23■□□□□ 0.83
TRAPPC12-216ENST00000469400 POTEAQ6S8J7 498 aa20.23■□□□□ 0.83
TRAPPC12-216ENST00000469400 KANK1Q14678 1352 aa20.22■□□□□ 0.83
TRAPPC12-216ENST00000469400 RBM33Q96EV2 1170 aaKnown RBP20.22■□□□□ 0.83
TRAPPC12-216ENST00000469400 SLC26A8Q96RN1 970 aa20.22■□□□□ 0.83
TRAPPC12-216ENST00000469400 PROSER2Q86WR7 435 aaPredicted RBP20.21■□□□□ 0.83
TRAPPC12-216ENST00000469400 EFCAB6Q5THR3 1501 aa20.21■□□□□ 0.83
TRAPPC12-216ENST00000469400 DAPK1P53355 1430 aa20.19■□□□□ 0.82
TRAPPC12-216ENST00000469400 TET3O43151 1660 aa20.18■□□□□ 0.82
TRAPPC12-216ENST00000469400 LMTK2Q8IWU2 1503 aa20.17■□□□□ 0.82
TRAPPC12-216ENST00000469400 CROCC2H7BZ55 1655 aa20.16■□□□□ 0.82
TRAPPC12-216ENST00000469400 PTPN23Q9H3S7 1636 aa20.16■□□□□ 0.82
TRAPPC12-216ENST00000469400 KDM5AP29375 1690 aaKnown RBP20.16■□□□□ 0.82
TRAPPC12-216ENST00000469400 ROBO1Q9Y6N7 1651 aa20.16■□□□□ 0.82
TRAPPC12-216ENST00000469400 CHIC2Q9UKJ5 165 aa20.15■□□□□ 0.82
TRAPPC12-216ENST00000469400 NOS1P29475 1434 aa20.14■□□□□ 0.81
TRAPPC12-216ENST00000469400 ANKRD30AQ9BXX3 1397 aa20.14■□□□□ 0.81
TRAPPC12-216ENST00000469400 BCANQ96GW7 911 aa20.13■□□□□ 0.81
TRAPPC12-216ENST00000469400 NKTRP30414 1462 aaKnown RBP20.12■□□□□ 0.81
TRAPPC12-216ENST00000469400 MSH6P52701 1360 aa20.12■□□□□ 0.81
TRAPPC12-216ENST00000469400 SLC52A1Q9NWF4 448 aa20.12■□□□□ 0.81
TRAPPC12-216ENST00000469400 SLAIN2Q9P270 581 aa20.12■□□□□ 0.81
TRAPPC12-216ENST00000469400 FGD6Q6ZV73 1430 aa20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 128.8 ms