RNA–Protein interactions for RNA: ENST00000469400.1

TRAPPC12-216, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 720 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-216ENST00000469400 KRTAP5-7Q6L8G8 165 aa4.63□□□□□ -1.67
TRAPPC12-216ENST00000469400 PP632Q6XCG6 107 aa4.63□□□□□ -1.67
TRAPPC12-216ENST00000469400 CAMK2N1Q7Z7J9 78 aa4.63□□□□□ -1.67
TRAPPC12-216ENST00000469400 BRK1Q8WUW1 75 aa4.63□□□□□ -1.67
TRAPPC12-216ENST00000469400 KRTAP5-4Q6L8H1 288 aa4.62□□□□□ -1.67
TRAPPC12-216ENST00000469400 PSPHP1O15172 72 aa4.61□□□□□ -1.67
TRAPPC12-216ENST00000469400 KRTAP19-5Q3LI72 72 aa4.59□□□□□ -1.67
TRAPPC12-216ENST00000469400 MT1MQ8N339 61 aa4.59□□□□□ -1.67
TRAPPC12-216ENST00000469400 KRTAP5-3Q6L8H2 238 aa4.56□□□□□ -1.68
TRAPPC12-216ENST00000469400 A0A0D9SG42 100 aa4.54□□□□□ -1.68
TRAPPC12-216ENST00000469400 KRTAP13-4Q3LI77 160 aa4.54□□□□□ -1.68
TRAPPC12-216ENST00000469400 KRTAP4-12Q9BQ66 201 aa4.53□□□□□ -1.68
TRAPPC12-216ENST00000469400 A0A1B0GU33 70 aa4.52□□□□□ -1.69
TRAPPC12-216ENST00000469400 UQCR11O14957 56 aa4.52□□□□□ -1.69
TRAPPC12-216ENST00000469400 MT1LQ93083 61 aa4.52□□□□□ -1.69
TRAPPC12-216ENST00000469400 KRTAP4-3Q9BYR4 195 aa4.52□□□□□ -1.69
TRAPPC12-216ENST00000469400 KRTAP19-4Q3LI73 84 aa4.51□□□□□ -1.69
TRAPPC12-216ENST00000469400 CDC42SE1Q9NRR8 79 aa4.51□□□□□ -1.69
TRAPPC12-216ENST00000469400 A6NED7 52 aa4.49□□□□□ -1.69
TRAPPC12-216ENST00000469400 SPRR5A0A1B0GTR4 108 aa4.45□□□□□ -1.7
TRAPPC12-216ENST00000469400 SPATA8Q6RVD6 105 aa4.45□□□□□ -1.7
TRAPPC12-216ENST00000469400 MIR22HGQ0VDD5 57 aa4.44□□□□□ -1.7
TRAPPC12-216ENST00000469400 A8MU10 97 aa4.42□□□□□ -1.7
TRAPPC12-216ENST00000469400 PMAIP1Q13794 54 aa4.41□□□□□ -1.7
TRAPPC12-216ENST00000469400 KRTAP20-2Q3LI61 65 aa4.39□□□□□ -1.71
TRAPPC12-216ENST00000469400 KTN1-AS1Q86SY8 53 aa4.34□□□□□ -1.71
TRAPPC12-216ENST00000469400 KRTAP9-9Q9BYP9 154 aa4.33□□□□□ -1.72
TRAPPC12-216ENST00000469400 KRTAP9-4Q9BYQ2 154 aa4.33□□□□□ -1.72
TRAPPC12-216ENST00000469400 C10orf95Q9H7T3 257 aa4.32□□□□□ -1.72
TRAPPC12-216ENST00000469400 SPINT4Q6UDR6 99 aa4.31□□□□□ -1.72
TRAPPC12-216ENST00000469400 KRTAP4-7Q9BYR0 210 aa4.3□□□□□ -1.72
TRAPPC12-216ENST00000469400 K7ERS5 55 aa4.28□□□□□ -1.72
TRAPPC12-216ENST00000469400 LCE3AQ5TA76 89 aa4.28□□□□□ -1.72
TRAPPC12-216ENST00000469400 KRTAP12-1P59990 96 aa4.26□□□□□ -1.73
TRAPPC12-216ENST00000469400 KRTAP5-5Q701N2 237 aaPredicted RBP4.26□□□□□ -1.73
TRAPPC12-216ENST00000469400 KRTAP12-4P60329 112 aa4.24□□□□□ -1.73
TRAPPC12-216ENST00000469400 KRTAP23-1A1A580 65 aa4.23□□□□□ -1.73
TRAPPC12-216ENST00000469400 SYNE1Q8NF91 8797 aaKnown RBP4.19□□□□□ -1.74
TRAPPC12-216ENST00000469400 TNP1P09430 55 aa4.15□□□□□ -1.75
TRAPPC12-216ENST00000469400 KRTAP4-11Q9BYQ6 195 aa4.12□□□□□ -1.75
TRAPPC12-216ENST00000469400 KRTAP12-3P60328 96 aa4.11□□□□□ -1.75
TRAPPC12-216ENST00000469400 ROMO1P60602 79 aa4.08□□□□□ -1.76
TRAPPC12-216ENST00000469400 AHNAKQ09666 5890 aaKnown RBP4.07□□□□□ -1.76
TRAPPC12-216ENST00000469400 PRAC1Q96KF2 57 aa4.06□□□□□ -1.76
TRAPPC12-216ENST00000469400 MUC5ACP98088 5654 aa4.04□□□□□ -1.76
TRAPPC12-216ENST00000469400 MUC5BQ9HC84 5762 aaPredicted RBP4.01□□□□□ -1.77
TRAPPC12-216ENST00000469400 KRTAP5-8O75690 187 aa3.99□□□□□ -1.77
TRAPPC12-216ENST00000469400 KRTAP25-1Q3LHN0 102 aa3.97□□□□□ -1.77
TRAPPC12-216ENST00000469400 KRTAP5-2Q701N4 177 aa3.97□□□□□ -1.77
TRAPPC12-216ENST00000469400 KRTAP4-2Q9BYR5 136 aa3.88□□□□□ -1.79
TRAPPC12-216ENST00000469400 OBSCNQ5VST9 7968 aa3.87□□□□□ -1.79
TRAPPC12-216ENST00000469400 KRTAP6-1Q3LI64 71 aa3.84□□□□□ -1.79
TRAPPC12-216ENST00000469400 MT1AP04731 61 aa3.83□□□□□ -1.8
TRAPPC12-216ENST00000469400 KRTAP6-2Q3LI66 62 aa3.76□□□□□ -1.81
TRAPPC12-216ENST00000469400 KRTAP15-1Q3LI76 137 aa3.76□□□□□ -1.81
TRAPPC12-216ENST00000469400 LCE3CQ5T5A8 94 aa3.74□□□□□ -1.81
TRAPPC12-216ENST00000469400 KRTAP5-1Q6L8H4 278 aa3.65□□□□□ -1.83
TRAPPC12-216ENST00000469400 KRTAP9-6A8MVA2 160 aa3.56□□□□□ -1.84
TRAPPC12-216ENST00000469400 A0A0A0MQY5 61 aa3.55□□□□□ -1.84
TRAPPC12-216ENST00000469400 MT3P25713 68 aa3.52□□□□□ -1.85
TRAPPC12-216ENST00000469400 NDUFAF8A1L188 74 aa3.38□□□□□ -1.87
TRAPPC12-216ENST00000469400 LCE1EQ5T753 118 aa3.33□□□□□ -1.88
TRAPPC12-216ENST00000469400 LUZP6Q538Z0 58 aa3.29□□□□□ -1.88
TRAPPC12-216ENST00000469400 LCE1BQ5T7P3 118 aa3.18□□□□□ -1.9
TRAPPC12-216ENST00000469400 LCE1CQ5T751 118 aa3.1□□□□□ -1.91
TRAPPC12-216ENST00000469400 KRTAP5-11Q6L8G4 156 aa2.9□□□□□ -1.95
TRAPPC12-216ENST00000469400 INE1O15225 51 aa2.89□□□□□ -1.95
TRAPPC12-216ENST00000469400 LCE1FQ5T754 118 aa2.85□□□□□ -1.95
TRAPPC12-216ENST00000469400 PHGR1C9JFL3 82 aa2.79□□□□□ -1.96
TRAPPC12-216ENST00000469400 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.76□□□□□ -1.97
TRAPPC12-216ENST00000469400 LCE3DQ9BYE3 92 aa2.61□□□□□ -1.99
TRAPPC12-216ENST00000469400 KRTAP21-2Q3LI59 83 aa2.54□□□□□ -2
TRAPPC12-216ENST00000469400 LCE3EQ5T5B0 92 aa2.46□□□□□ -2.02
TRAPPC12-216ENST00000469400 MUC19Q7Z5P9 8384 aa2.42□□□□□ -2.02
TRAPPC12-216ENST00000469400 KRTAP4-4Q9BYR3 166 aa2.4□□□□□ -2.03
TRAPPC12-216ENST00000469400 KRTAP21-1Q3LI58 79 aa2.12□□□□□ -2.07
TRAPPC12-216ENST00000469400 PRM1P04553 51 aa2.1□□□□□ -2.07
TRAPPC12-216ENST00000469400 MUC16Q8WXI7 14507 aa1.64□□□□□ -2.15
Retrieved 78 of 20,778 RNA–protein pairs in 13.5 ms