RNA–Protein interactions for RNA: ENST00000469400.1

TRAPPC12-216, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 720 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-216ENST00000469400 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.54□□□□□ -0.242e-10■■■■■ 233.8
TRAPPC12-216ENST00000469400 FMR1Q06787 632 aaKnown RBP eCLIP17.12■□□□□ 0.332e-31■■■■■ 109.2
TRAPPC12-216ENST00000469400 PPIGQ13427 754 aaKnown RBP eCLIP15.45■□□□□ 0.061e-8■■■■■ 35
TRAPPC12-216ENST00000469400 HLTFQ14527 1009 aaKnown RBP eCLIP12.93□□□□□ -0.342e-6■■■■■ 29.3
TRAPPC12-216ENST00000469400 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.15□□□□□ -0.34e-7■■■■■ 28.7
TRAPPC12-216ENST00000469400 QKIQ96PU8 341 aaKnown RBP eCLIP12.29□□□□□ -0.448e-8■■■■□ 26.5
TRAPPC12-216ENST00000469400 HNRNPMP52272 730 aaKnown RBP eCLIP21.01■□□□□ 0.951e-6■■■■□ 26.1
TRAPPC12-216ENST00000469400 SF3B4Q15427 424 aaKnown RBP eCLIP11.75□□□□□ -0.533e-11■■■■□ 25
TRAPPC12-216ENST00000469400 KHSRPQ92945 711 aaKnown RBP eCLIP15.18■□□□□ 0.026e-11■■■□□ 18.6
TRAPPC12-216ENST00000469400 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.48■□□□□ 0.072e-11■■■□□ 17
TRAPPC12-216ENST00000469400 YWHAGP61981 247 aaKnown RBP eCLIP13.39□□□□□ -0.272e-6■■■□□ 16
TRAPPC12-216ENST00000469400 HNRNPCP07910 306 aaKnown RBP eCLIP9.06□□□□□ -0.962e-6■■■□□ 15.9
TRAPPC12-216ENST00000469400 SAFB2Q14151 953 aaKnown RBP eCLIP19.15■□□□□ 0.661e-6■■■□□ 15.7
TRAPPC12-216ENST00000469400 EFTUD2Q15029 972 aaKnown RBP eCLIP11.8□□□□□ -0.523e-7■■■□□ 15.2
TRAPPC12-216ENST00000469400 RBM22Q9NW64 420 aaKnown RBP eCLIP12.59□□□□□ -0.393e-7■■■□□ 14.9
TRAPPC12-216ENST00000469400 SF3A3Q12874 501 aaKnown RBP eCLIP10.31□□□□□ -0.763e-9■□□□□ 10.4
TRAPPC12-216ENST00000469400 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.29■□□□□ 0.844e-9■□□□□ 9.3
TRAPPC12-216ENST00000469400 SRSF9Q13242 221 aaKnown RBP eCLIP7.97□□□□□ -1.131e-7■□□□□ 8.8
Retrieved 18 of 18 RNA–protein pairs in 6.1 ms