RNA–Protein interactions for RNA: ENST00000468822.5

SRRM1-207, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 2

Gene SRRM1, Length 768 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-207ENST00000468822 EHBP1L1Q8N3D4 1523 aa25.02■■□□□ 1.6
SRRM1-207ENST00000468822 CEP162Q5TB80 1403 aa25■■□□□ 1.59
SRRM1-207ENST00000468822 NEURL4Q96JN8 1562 aa24.98■■□□□ 1.59
SRRM1-207ENST00000468822 KIF3BO15066 747 aa24.97■■□□□ 1.59
SRRM1-207ENST00000468822 TNRQ92752 1358 aa24.96■■□□□ 1.59
SRRM1-207ENST00000468822 PZPP20742 1482 aa24.94■■□□□ 1.58
SRRM1-207ENST00000468822 CCDC141Q6ZP82 1450 aa24.93■■□□□ 1.58
SRRM1-207ENST00000468822 KDM5DQ9BY66 1539 aa24.92■■□□□ 1.58
SRRM1-207ENST00000468822 CAMSAP2Q08AD1 1489 aa24.92■■□□□ 1.58
SRRM1-207ENST00000468822 POLR1AO95602 1720 aaPredicted RBP24.92■■□□□ 1.58
SRRM1-207ENST00000468822 NCOA2Q15596 1464 aa24.91■■□□□ 1.58
SRRM1-207ENST00000468822 HSPA1LP34931 641 aa24.9■■□□□ 1.58
SRRM1-207ENST00000468822 SHANK2Q9UPX8 1470 aa24.89■■□□□ 1.58
SRRM1-207ENST00000468822 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.89■■□□□ 1.57
SRRM1-207ENST00000468822 WASHC2CQ9Y4E1 1318 aa24.88■■□□□ 1.57
SRRM1-207ENST00000468822 PIP4K2BP78356 416 aa24.88■■□□□ 1.57
SRRM1-207ENST00000468822 MIA2Q96PC5 1412 aa24.86■■□□□ 1.57
SRRM1-207ENST00000468822 CPS1P31327 1500 aa24.86■■□□□ 1.57
SRRM1-207ENST00000468822 VWDEQ8N2E2 1590 aa24.86■■□□□ 1.57
SRRM1-207ENST00000468822 FAM135AQ9P2D6 1515 aa24.86■■□□□ 1.57
SRRM1-207ENST00000468822 SCAF1Q9H7N4 1312 aaKnown RBP24.86■■□□□ 1.57
SRRM1-207ENST00000468822 ANKLE2Q86XL3 938 aa24.83■■□□□ 1.57
SRRM1-207ENST00000468822 ALKQ9UM73 1620 aa24.83■■□□□ 1.56
SRRM1-207ENST00000468822 NLRP1Q9C000 1473 aa24.82■■□□□ 1.56
SRRM1-207ENST00000468822 ARHGEF5Q12774 1597 aa24.81■■□□□ 1.56
SRRM1-207ENST00000468822 MED1Q15648 1581 aaPredicted RBP24.81■■□□□ 1.56
SRRM1-207ENST00000468822 UGGT1Q9NYU2 1555 aa24.81■■□□□ 1.56
SRRM1-207ENST00000468822 RSPH4AQ5TD94 716 aa24.81■■□□□ 1.56
SRRM1-207ENST00000468822 TOM1O60784 492 aa24.8■■□□□ 1.56
SRRM1-207ENST00000468822 THEMISQ8N1K5 641 aaPredicted RBP24.8■■□□□ 1.56
SRRM1-207ENST00000468822 MED14O60244 1454 aa24.8■■□□□ 1.56
SRRM1-207ENST00000468822 NPHP4O75161 1426 aaPredicted RBP24.79■■□□□ 1.56
SRRM1-207ENST00000468822 DEPDC5O75140 1603 aa24.77■■□□□ 1.56
SRRM1-207ENST00000468822 ABCC3O15438 1527 aa24.76■■□□□ 1.55
SRRM1-207ENST00000468822 RNF17Q9BXT8 1623 aaKnown RBP24.75■■□□□ 1.55
SRRM1-207ENST00000468822 TSPY4P0CV99 314 aa24.74■■□□□ 1.55
SRRM1-207ENST00000468822 TSPY10P0CW01 314 aa24.74■■□□□ 1.55
SRRM1-207ENST00000468822 STRCP1A6NGW2 1772 aa24.74■■□□□ 1.55
SRRM1-207ENST00000468822 IQGAP1P46940 1657 aa24.72■■□□□ 1.55
SRRM1-207ENST00000468822 MROH1Q8NDA8 1641 aa24.71■■□□□ 1.55
SRRM1-207ENST00000468822 LRRC9Q6ZRR7 1453 aa24.7■■□□□ 1.55
SRRM1-207ENST00000468822 MAST1Q9Y2H9 1570 aa24.7■■□□□ 1.54
SRRM1-207ENST00000468822 ERVK-7P63135 1459 aa24.7■■□□□ 1.54
SRRM1-207ENST00000468822 LRRC7Q96NW7 1537 aa24.69■■□□□ 1.54
SRRM1-207ENST00000468822 ZC3H13Q5T200 1668 aaKnown RBP24.66■■□□□ 1.54
SRRM1-207ENST00000468822 KANK4Q5T7N3 995 aaPredicted RBP24.66■■□□□ 1.54
SRRM1-207ENST00000468822 EIF2AK4Q9P2K8 1649 aaKnown RBP24.64■■□□□ 1.53
SRRM1-207ENST00000468822 CEP152O94986 1710 aa24.63■■□□□ 1.53
SRRM1-207ENST00000468822 VPS8Q8N3P4 1428 aa24.62■■□□□ 1.53
SRRM1-207ENST00000468822 UBR1Q8IWV7 1749 aa24.62■■□□□ 1.53
SRRM1-207ENST00000468822 LTKP29376 864 aa24.6■■□□□ 1.53
SRRM1-207ENST00000468822 CFAP65Q6ZU64 1925 aaKnown RBP24.6■■□□□ 1.53
SRRM1-207ENST00000468822 SYNMO15061 1565 aa24.59■■□□□ 1.53
SRRM1-207ENST00000468822 MYOM3Q5VTT5 1437 aa24.58■■□□□ 1.53
SRRM1-207ENST00000468822 SCAF11Q99590 1463 aaKnown RBP24.58■■□□□ 1.52
SRRM1-207ENST00000468822 ARHGAP23Q9P227 1491 aa24.57■■□□□ 1.52
SRRM1-207ENST00000468822 LOC105371045A0A1W2PR82 267 aa24.56■■□□□ 1.52
SRRM1-207ENST00000468822 DUOX2Q9NRD8 1548 aa24.56■■□□□ 1.52
SRRM1-207ENST00000468822 SLIT1O75093 1534 aa24.54■■□□□ 1.52
SRRM1-207ENST00000468822 TXNDC2Q86VQ3 553 aa24.53■■□□□ 1.52
SRRM1-207ENST00000468822 PRDM15P57071 1507 aaPredicted RBP24.52■■□□□ 1.52
SRRM1-207ENST00000468822 ARHGAP31Q2M1Z3 1444 aa24.52■■□□□ 1.52
SRRM1-207ENST00000468822 MAP3K1Q13233 1512 aa24.51■■□□□ 1.51
SRRM1-207ENST00000468822 XIRP1Q702N8 1843 aaKnown RBP24.51■■□□□ 1.51
SRRM1-207ENST00000468822 KIF15Q9NS87 1388 aa24.51■■□□□ 1.51
SRRM1-207ENST00000468822 ABCC5O15440 1437 aa24.5■■□□□ 1.51
SRRM1-207ENST00000468822 RRP7BPQ9NSQ0 103 aa24.49■■□□□ 1.51
SRRM1-207ENST00000468822 RGS17Q9UGC6 210 aaPredicted RBP24.48■■□□□ 1.51
SRRM1-207ENST00000468822 PIK3C2BO00750 1634 aa24.47■■□□□ 1.51
SRRM1-207ENST00000468822 ERBINQ96RT1 1412 aa24.46■■□□□ 1.51
SRRM1-207ENST00000468822 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.46■■□□□ 1.516e-7■■■■□ 19.3
SRRM1-207ENST00000468822 CROCC2H7BZ55 1655 aa24.45■■□□□ 1.5
SRRM1-207ENST00000468822 TMEM2Q9UHN6 1383 aa24.44■■□□□ 1.5
SRRM1-207ENST00000468822 EID1Q9Y6B2 187 aa24.42■■□□□ 1.5
SRRM1-207ENST00000468822 PTPN23Q9H3S7 1636 aa24.41■■□□□ 1.5
SRRM1-207ENST00000468822 DAPK1P53355 1430 aa24.4■■□□□ 1.5
SRRM1-207ENST00000468822 IDI1Q13907 227 aa24.39■■□□□ 1.49
SRRM1-207ENST00000468822 TMEM94Q12767 1356 aa24.38■■□□□ 1.49
SRRM1-207ENST00000468822 FAM135BQ49AJ0 1406 aa24.37■■□□□ 1.49
SRRM1-207ENST00000468822 EFCAB6Q5THR3 1501 aa24.37■■□□□ 1.49
SRRM1-207ENST00000468822 RBM33Q96EV2 1170 aaKnown RBP24.37■■□□□ 1.49
SRRM1-207ENST00000468822 SLC26A8Q96RN1 970 aa24.36■■□□□ 1.49
SRRM1-207ENST00000468822 TET3O43151 1660 aa24.36■■□□□ 1.49
SRRM1-207ENST00000468822 LMTK2Q8IWU2 1503 aa24.35■■□□□ 1.49
SRRM1-207ENST00000468822 CHIC2Q9UKJ5 165 aa24.35■■□□□ 1.49
SRRM1-207ENST00000468822 STAG3Q9UJ98 1225 aa24.34■■□□□ 1.49
SRRM1-207ENST00000468822 KANK1Q14678 1352 aa24.33■■□□□ 1.49
SRRM1-207ENST00000468822 KCNA6P17658 529 aa24.33■■□□□ 1.49
SRRM1-207ENST00000468822 FGD6Q6ZV73 1430 aa24.33■■□□□ 1.49
SRRM1-207ENST00000468822 KDM5AP29375 1690 aaKnown RBP24.33■■□□□ 1.49
SRRM1-207ENST00000468822 NOS1P29475 1434 aa24.31■■□□□ 1.48
SRRM1-207ENST00000468822 POTEAQ6S8J7 498 aa24.29■■□□□ 1.48
SRRM1-207ENST00000468822 ROBO1Q9Y6N7 1651 aa24.29■■□□□ 1.48
SRRM1-207ENST00000468822 PROSER2Q86WR7 435 aaPredicted RBP24.28■■□□□ 1.48
SRRM1-207ENST00000468822 ADGRB3O60242 1522 aa24.28■■□□□ 1.48
SRRM1-207ENST00000468822 ANKRD30AQ9BXX3 1397 aa24.28■■□□□ 1.48
SRRM1-207ENST00000468822 NWD1Q149M9 1564 aa24.25■■□□□ 1.47
SRRM1-207ENST00000468822 NKTRP30414 1462 aaKnown RBP24.23■■□□□ 1.47
SRRM1-207ENST00000468822 ZFYVE9O95405 1425 aa24.2■■□□□ 1.46
SRRM1-207ENST00000468822 SLC52A1Q9NWF4 448 aa24.2■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms