RNA–Protein interactions for RNA: ENST00000468822.5

SRRM1-207, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 2

Gene SRRM1, Length 768 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-207ENST00000468822 NISCHQ9Y2I1 1504 aa39.41■■■■□ 3.9
SRRM1-207ENST00000468822 ABCC9O60706 1549 aa35.87■■■■□ 3.33
SRRM1-207ENST00000468822 CCDC180Q9P1Z9 1646 aa35.43■■■■□ 3.26
SRRM1-207ENST00000468822 DNAJC5BQ9UF47 199 aa34.05■■■■□ 3.04
SRRM1-207ENST00000468822 RB1CC1Q8TDY2 1594 aa33.89■■■■□ 3.02
SRRM1-207ENST00000468822 NACADO15069 1562 aa33.59■■■□□ 2.97
SRRM1-207ENST00000468822 DCAF8L2P0C7V8 631 aa33.4■■■□□ 2.94
SRRM1-207ENST00000468822 PABPN1Q86U42 306 aaKnown RBP eCLIP33.38■■■□□ 2.93
SRRM1-207ENST00000468822 UNC13AQ9UPW8 1703 aa33.19■■■□□ 2.9
SRRM1-207ENST00000468822 BICRAQ9NZM4 1560 aa33.04■■■□□ 2.88
SRRM1-207ENST00000468822 MYO15BQ96JP2 1530 aa33.02■■■□□ 2.88
SRRM1-207ENST00000468822 ZCCHC6Q5VYS8 1495 aaKnown RBP32.6■■■□□ 2.81
SRRM1-207ENST00000468822 DCAF1Q9Y4B6 1507 aa32.49■■■□□ 2.79
SRRM1-207ENST00000468822 SHROOM4Q9ULL8 1493 aa32.41■■■□□ 2.78
SRRM1-207ENST00000468822 CC2D2AQ9P2K1 1620 aa32.36■■■□□ 2.77
SRRM1-207ENST00000468822 SCRIBQ14160 1630 aa32.35■■■□□ 2.77
SRRM1-207ENST00000468822 CECR2Q9BXF3 1484 aa32.31■■■□□ 2.76
SRRM1-207ENST00000468822 EIF4G1Q04637 1599 aaKnown RBP32.2■■■□□ 2.75
SRRM1-207ENST00000468822 DNAJC5Q9H3Z4 198 aa31.4■■■□□ 2.62
SRRM1-207ENST00000468822 NCAPD3P42695 1498 aa31.07■■■□□ 2.56
SRRM1-207ENST00000468822 CUX2O14529 1486 aa30.96■■■□□ 2.55
SRRM1-207ENST00000468822 ATAD2BQ9ULI0 1458 aa30.95■■■□□ 2.54
SRRM1-207ENST00000468822 ERCC6Q03468 1493 aa30.92■■■□□ 2.54
SRRM1-207ENST00000468822 SMARCA4P51532 1647 aa30.8■■■□□ 2.52
SRRM1-207ENST00000468822 HMGXB3Q12766 1538 aa30.77■■■□□ 2.52
SRRM1-207ENST00000468822 SMARCA2P51531 1590 aa30.76■■■□□ 2.52
SRRM1-207ENST00000468822 NESP48681 1621 aa30.76■■■□□ 2.51
SRRM1-207ENST00000468822 BAZ1BQ9UIG0 1483 aaKnown RBP30.58■■■□□ 2.49
SRRM1-207ENST00000468822 BAZ1AQ9NRL2 1556 aaPredicted RBP30.56■■■□□ 2.48
SRRM1-207ENST00000468822 PEG3Q9GZU2 1588 aa30.49■■■□□ 2.47
SRRM1-207ENST00000468822 THOC2Q8NI27 1593 aaKnown RBP30.45■■■□□ 2.47
SRRM1-207ENST00000468822 MROH2BQ7Z745 1585 aa30.41■■■□□ 2.46
SRRM1-207ENST00000468822 LAMC3Q9Y6N6 1575 aa30.37■■■□□ 2.45
SRRM1-207ENST00000468822 KIF21AQ7Z4S6 1674 aa30.28■■■□□ 2.44
SRRM1-207ENST00000468822 PDS5BQ9NTI5 1447 aa30.2■■■□□ 2.42
SRRM1-207ENST00000468822 CADPSQ9ULU8 1353 aa30.1■■■□□ 2.41
SRRM1-207ENST00000468822 WIZO95785 1651 aa30■■■□□ 2.39
SRRM1-207ENST00000468822 MRC2Q9UBG0 1479 aa29.99■■■□□ 2.39
SRRM1-207ENST00000468822 WDR62O43379 1518 aa29.95■■■□□ 2.38
SRRM1-207ENST00000468822 AEBP2Q6ZN18 517 aaPredicted RBP29.89■■■□□ 2.38
SRRM1-207ENST00000468822 TRIM41Q8WV44 630 aa29.89■■■□□ 2.38
SRRM1-207ENST00000468822 CEP164Q9UPV0 1460 aa29.8■■■□□ 2.36
SRRM1-207ENST00000468822 FANCD2Q9BXW9 1451 aa29.76■■■□□ 2.35
SRRM1-207ENST00000468822 CFTRP13569 1480 aa29.7■■■□□ 2.35
SRRM1-207ENST00000468822 RSF1Q96T23 1441 aaPredicted RBP29.65■■■□□ 2.34
SRRM1-207ENST00000468822 URB2Q14146 1524 aaKnown RBP29.59■■■□□ 2.33
SRRM1-207ENST00000468822 TOP2AP11388 1531 aaKnown RBP29.56■■■□□ 2.32
SRRM1-207ENST00000468822 OSCARQ8IYS5 282 aa29.51■■■□□ 2.31
SRRM1-207ENST00000468822 ZNF608Q9ULD9 1512 aaPredicted RBP29.3■■■□□ 2.28
SRRM1-207ENST00000468822 CCDC88BA6NC98 1476 aa29.28■■■□□ 2.28
SRRM1-207ENST00000468822 PRDM2Q13029 1718 aa29.28■■■□□ 2.28
SRRM1-207ENST00000468822 IFT140Q96RY7 1462 aa29.21■■■□□ 2.27
SRRM1-207ENST00000468822 RIMBP3CA6NJZ7 1639 aa29.2■■■□□ 2.27
SRRM1-207ENST00000468822 RIMBP3BA6NNM3 1639 aa29.2■■■□□ 2.27
SRRM1-207ENST00000468822 RIMBP3Q9UFD9 1639 aa29.2■■■□□ 2.27
SRRM1-207ENST00000468822 TOPBP1Q92547 1522 aa29.17■■■□□ 2.26
SRRM1-207ENST00000468822 ARHGEF11O15085 1522 aa29.08■■■□□ 2.25
SRRM1-207ENST00000468822 EIF4G3O43432 1585 aaKnown RBP29.05■■■□□ 2.24
SRRM1-207ENST00000468822 DNMBPQ6XZF7 1577 aa29.01■■■□□ 2.23
SRRM1-207ENST00000468822 ABCC8Q09428 1581 aa28.99■■■□□ 2.23
SRRM1-207ENST00000468822 AQRO60306 1485 aaKnown RBP eCLIP28.97■■■□□ 2.231e-15■■■□□ 18.4
SRRM1-207ENST00000468822 TARBP1Q13395 1621 aaKnown RBP28.95■■■□□ 2.23
SRRM1-207ENST00000468822 CYB5RLQ6IPT4 315 aa28.89■■■□□ 2.22
SRRM1-207ENST00000468822 CHD1O14646 1710 aa28.89■■■□□ 2.21
SRRM1-207ENST00000468822 POLA1P09884 1462 aaPredicted RBP28.86■■■□□ 2.21
SRRM1-207ENST00000468822 ARAP1Q96P48 1450 aa28.8■■■□□ 2.2
SRRM1-207ENST00000468822 RAD54L2Q9Y4B4 1467 aa28.8■■■□□ 2.2
SRRM1-207ENST00000468822 FBLN2P98095 1184 aa28.79■■■□□ 2.2
SRRM1-207ENST00000468822 TDRD9Q8NDG6 1382 aaKnown RBP28.74■■■□□ 2.19
SRRM1-207ENST00000468822 CHIC1Q5VXU3 224 aa28.72■■■□□ 2.19
SRRM1-207ENST00000468822 SOGA1O94964 1423 aa28.69■■■□□ 2.18
SRRM1-207ENST00000468822 TRHP20396 242 aaPredicted RBP28.63■■■□□ 2.17
SRRM1-207ENST00000468822 SNAPC4Q5SXM2 1469 aa28.63■■■□□ 2.17
SRRM1-207ENST00000468822 FGD5Q6ZNL6 1462 aa28.63■■■□□ 2.17
SRRM1-207ENST00000468822 CUX1P39880 1505 aa28.59■■■□□ 2.17
SRRM1-207ENST00000468822 CLASP1Q7Z460 1538 aa28.58■■■□□ 2.17
SRRM1-207ENST00000468822 WDR97A6NE52 1622 aa28.52■■■□□ 2.16
SRRM1-207ENST00000468822 CHMP7Q8WUX9 453 aaPredicted RBP28.5■■■□□ 2.15
SRRM1-207ENST00000468822 MAGI1Q96QZ7 1491 aaPredicted RBP28.49■■■□□ 2.15
SRRM1-207ENST00000468822 GRIN2BQ13224 1484 aa28.47■■■□□ 2.15
SRRM1-207ENST00000468822 SYNJ1O43426 1573 aa28.45■■■□□ 2.14
SRRM1-207ENST00000468822 SYNJ2O15056 1496 aa28.42■■■□□ 2.14
SRRM1-207ENST00000468822 GAPVD1Q14C86 1478 aa28.34■■■□□ 2.13
SRRM1-207ENST00000468822 PBRM1Q86U86 1689 aa28.32■■■□□ 2.12
SRRM1-207ENST00000468822 ABCA10Q8WWZ4 1543 aa28.27■■■□□ 2.12
SRRM1-207ENST00000468822 ABCA5Q8WWZ7 1642 aa28.26■■■□□ 2.11
SRRM1-207ENST00000468822 ERCC6L2Q5T890 1561 aa28.18■■■□□ 2.1
SRRM1-207ENST00000468822 GRIN2AQ12879 1464 aa28.13■■■□□ 2.09
SRRM1-207ENST00000468822 ADAMTS12P58397 1594 aa28.07■■■□□ 2.08
SRRM1-207ENST00000468822 CEP170Q5SW79 1584 aa28.07■■■□□ 2.08
SRRM1-207ENST00000468822 SUPT5HO00267 1087 aaKnown RBP28.07■■■□□ 2.08
SRRM1-207ENST00000468822 NUP160Q12769 1436 aa28.06■■■□□ 2.08
SRRM1-207ENST00000468822 WRNQ14191 1432 aaPredicted RBP eCLIP28.06■■■□□ 2.08
SRRM1-207ENST00000468822 TOP2BQ02880 1626 aa27.98■■■□□ 2.07
SRRM1-207ENST00000468822 BIVM-ERCC5R4GMW8 1640 aa27.97■■■□□ 2.07
SRRM1-207ENST00000468822 SHROOM2Q13796 1616 aa27.96■■■□□ 2.07
SRRM1-207ENST00000468822 FHAD1B1AJZ9 1412 aa27.95■■■□□ 2.07
SRRM1-207ENST00000468822 ERICH3Q5RHP9 1530 aa27.87■■■□□ 2.05
SRRM1-207ENST00000468822 PRG4Q92954 1404 aaPredicted RBP27.81■■■□□ 2.04
SRRM1-207ENST00000468822 KIF13AQ9H1H9 1805 aa27.76■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms