RNA–Protein interactions for RNA: ENST00000358394.7

CEACAM1-204, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, humanhuman

TSL 1 (best) BASIC

Gene CEACAM1, Length 1,484 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM1-204ENST00000358394 PKD2Q13563 968 aa14.29□□□□□ -0.12
CEACAM1-204ENST00000358394 ZNF335Q9H4Z2 1342 aaPredicted RBP14.28□□□□□ -0.12
CEACAM1-204ENST00000358394 TCOF1Q13428 1488 aaKnown RBP14.27□□□□□ -0.12
CEACAM1-204ENST00000358394 NCOA2Q15596 1464 aa14.27□□□□□ -0.12
CEACAM1-204ENST00000358394 CAMSAP2Q08AD1 1489 aa14.26□□□□□ -0.13
CEACAM1-204ENST00000358394 CCDC141Q6ZP82 1450 aa14.26□□□□□ -0.13
CEACAM1-204ENST00000358394 KIF3BO15066 747 aa14.26□□□□□ -0.13
CEACAM1-204ENST00000358394 A2ML1A8K2U0 1454 aa14.26□□□□□ -0.13
CEACAM1-204ENST00000358394 DNMT1P26358 1616 aaKnown RBP14.25□□□□□ -0.13
CEACAM1-204ENST00000358394 RSPH4AQ5TD94 716 aa14.25□□□□□ -0.13
CEACAM1-204ENST00000358394 FBXO31Q5XUX0 539 aaPredicted RBP14.24□□□□□ -0.13
CEACAM1-204ENST00000358394 KDM5DQ9BY66 1539 aa14.23□□□□□ -0.13
CEACAM1-204ENST00000358394 TNRQ92752 1358 aa14.23□□□□□ -0.13
CEACAM1-204ENST00000358394 UBAP1LF5GYI3 381 aa14.22□□□□□ -0.13
CEACAM1-204ENST00000358394 POLR1AO95602 1720 aaPredicted RBP14.22□□□□□ -0.13
CEACAM1-204ENST00000358394 WASHC2CQ9Y4E1 1318 aa14.22□□□□□ -0.13
CEACAM1-204ENST00000358394 ARHGEF5Q12774 1597 aa14.21□□□□□ -0.13
CEACAM1-204ENST00000358394 PZPP20742 1482 aa14.21□□□□□ -0.13
CEACAM1-204ENST00000358394 FAM135AQ9P2D6 1515 aa14.21□□□□□ -0.13
CEACAM1-204ENST00000358394 TSPY4P0CV99 314 aa14.2□□□□□ -0.14
CEACAM1-204ENST00000358394 TSPY10P0CW01 314 aa14.2□□□□□ -0.14
CEACAM1-204ENST00000358394 NEURL4Q96JN8 1562 aa14.18□□□□□ -0.14
CEACAM1-204ENST00000358394 LRRC9Q6ZRR7 1453 aa14.17□□□□□ -0.14
CEACAM1-204ENST00000358394 VPS8Q8N3P4 1428 aa14.16□□□□□ -0.14
CEACAM1-204ENST00000358394 MIA2Q96PC5 1412 aa14.16□□□□□ -0.14
CEACAM1-204ENST00000358394 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.16□□□□□ -0.14
CEACAM1-204ENST00000358394 NLRP1Q9C000 1473 aa14.15□□□□□ -0.14
CEACAM1-204ENST00000358394 LOC105371045A0A1W2PR82 267 aa14.15□□□□□ -0.14
CEACAM1-204ENST00000358394 ANKLE2Q86XL3 938 aa14.15□□□□□ -0.14
CEACAM1-204ENST00000358394 THEMISQ8N1K5 641 aaPredicted RBP14.15□□□□□ -0.14
CEACAM1-204ENST00000358394 UGGT1Q9NYU2 1555 aa14.14□□□□□ -0.15
CEACAM1-204ENST00000358394 RNF17Q9BXT8 1623 aaKnown RBP14.14□□□□□ -0.15
CEACAM1-204ENST00000358394 SHANK2Q9UPX8 1470 aa14.14□□□□□ -0.15
CEACAM1-204ENST00000358394 CPS1P31327 1500 aa14.14□□□□□ -0.15
CEACAM1-204ENST00000358394 MAST1Q9Y2H9 1570 aa14.14□□□□□ -0.15
CEACAM1-204ENST00000358394 KANK4Q5T7N3 995 aaPredicted RBP14.13□□□□□ -0.15
CEACAM1-204ENST00000358394 CFAP65Q6ZU64 1925 aaKnown RBP14.13□□□□□ -0.15
CEACAM1-204ENST00000358394 ABCC3O15438 1527 aa14.12□□□□□ -0.15
CEACAM1-204ENST00000358394 ZC3H13Q5T200 1668 aaKnown RBP14.12□□□□□ -0.15
CEACAM1-204ENST00000358394 SCAF1Q9H7N4 1312 aaKnown RBP14.12□□□□□ -0.15
CEACAM1-204ENST00000358394 EIF2AK4Q9P2K8 1649 aaKnown RBP14.11□□□□□ -0.15
CEACAM1-204ENST00000358394 DEPDC5O75140 1603 aa14.11□□□□□ -0.15
CEACAM1-204ENST00000358394 NPHP4O75161 1426 aaPredicted RBP14.11□□□□□ -0.15
CEACAM1-204ENST00000358394 PIP4K2BP78356 416 aa14.11□□□□□ -0.15
CEACAM1-204ENST00000358394 MYOM3Q5VTT5 1437 aa14.11□□□□□ -0.15
CEACAM1-204ENST00000358394 VWDEQ8N2E2 1590 aa14.1□□□□□ -0.15
CEACAM1-204ENST00000358394 MAP3K1Q13233 1512 aa14.1□□□□□ -0.15
CEACAM1-204ENST00000358394 MED14O60244 1454 aa14.1□□□□□ -0.15
CEACAM1-204ENST00000358394 TOM1O60784 492 aa14.1□□□□□ -0.15
CEACAM1-204ENST00000358394 CEP152O94986 1710 aa14.09□□□□□ -0.15
CEACAM1-204ENST00000358394 IQGAP1P46940 1657 aa14.09□□□□□ -0.15
CEACAM1-204ENST00000358394 MROH1Q8NDA8 1641 aa14.09□□□□□ -0.15
CEACAM1-204ENST00000358394 HSPA1LP34931 641 aa14.08□□□□□ -0.16
CEACAM1-204ENST00000358394 ERVK-7P63135 1459 aa14.08□□□□□ -0.16
CEACAM1-204ENST00000358394 DUOX2Q9NRD8 1548 aa14.06□□□□□ -0.16
CEACAM1-204ENST00000358394 STRCP1A6NGW2 1772 aa14.05□□□□□ -0.16
CEACAM1-204ENST00000358394 MED1Q15648 1581 aaPredicted RBP14.05□□□□□ -0.16
CEACAM1-204ENST00000358394 UBR1Q8IWV7 1749 aa14.04□□□□□ -0.16
CEACAM1-204ENST00000358394 CROCC2H7BZ55 1655 aa14.03□□□□□ -0.16
CEACAM1-204ENST00000358394 KIF15Q9NS87 1388 aa14.03□□□□□ -0.16
CEACAM1-204ENST00000358394 RRP7BPQ9NSQ0 103 aa14.02□□□□□ -0.16
CEACAM1-204ENST00000358394 PTPN23Q9H3S7 1636 aa14.02□□□□□ -0.17
CEACAM1-204ENST00000358394 ALKQ9UM73 1620 aa14.02□□□□□ -0.17
CEACAM1-204ENST00000358394 ABCC5O15440 1437 aa14.01□□□□□ -0.17
CEACAM1-204ENST00000358394 PRDM15P57071 1507 aaPredicted RBP14.01□□□□□ -0.17
CEACAM1-204ENST00000358394 APLP2Q06481 763 aa14.01□□□□□ -0.17
CEACAM1-204ENST00000358394 ERBINQ96RT1 1412 aa14.01□□□□□ -0.17
CEACAM1-204ENST00000358394 LRRC7Q96NW7 1537 aa14.01□□□□□ -0.17
CEACAM1-204ENST00000358394 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14□□□□□ -0.174e-8■□□□□ 11.2
CEACAM1-204ENST00000358394 ARHGAP31Q2M1Z3 1444 aa14□□□□□ -0.17
CEACAM1-204ENST00000358394 SYNMO15061 1565 aa14□□□□□ -0.17
CEACAM1-204ENST00000358394 SCAF11Q99590 1463 aaKnown RBP14□□□□□ -0.17
CEACAM1-204ENST00000358394 LTKP29376 864 aa13.99□□□□□ -0.17
CEACAM1-204ENST00000358394 TXNDC2Q86VQ3 553 aa13.99□□□□□ -0.17
CEACAM1-204ENST00000358394 DAPK1P53355 1430 aa13.98□□□□□ -0.17
CEACAM1-204ENST00000358394 SLIT1O75093 1534 aa13.98□□□□□ -0.17
CEACAM1-204ENST00000358394 ARHGAP23Q9P227 1491 aa13.97□□□□□ -0.17
CEACAM1-204ENST00000358394 PIK3C2BO00750 1634 aa13.96□□□□□ -0.17
CEACAM1-204ENST00000358394 KANK1Q14678 1352 aa13.96□□□□□ -0.17
CEACAM1-204ENST00000358394 FGD6Q6ZV73 1430 aa13.96□□□□□ -0.17
CEACAM1-204ENST00000358394 CHIC2Q9UKJ5 165 aa13.96□□□□□ -0.17
CEACAM1-204ENST00000358394 EID1Q9Y6B2 187 aa13.96□□□□□ -0.17
CEACAM1-204ENST00000358394 STAG3Q9UJ98 1225 aa13.95□□□□□ -0.18
CEACAM1-204ENST00000358394 ANKRD30AQ9BXX3 1397 aa13.94□□□□□ -0.18
CEACAM1-204ENST00000358394 XIRP1Q702N8 1843 aaKnown RBP13.94□□□□□ -0.18
CEACAM1-204ENST00000358394 TMEM2Q9UHN6 1383 aa13.93□□□□□ -0.18
CEACAM1-204ENST00000358394 CACNB1Q02641 598 aaPredicted RBP13.93□□□□□ -0.18
CEACAM1-204ENST00000358394 LMTK2Q8IWU2 1503 aa13.92□□□□□ -0.18
CEACAM1-204ENST00000358394 IDI1Q13907 227 aa13.92□□□□□ -0.18
CEACAM1-204ENST00000358394 KDM5AP29375 1690 aaKnown RBP13.92□□□□□ -0.18
CEACAM1-204ENST00000358394 EFCAB6Q5THR3 1501 aa13.91□□□□□ -0.18
CEACAM1-204ENST00000358394 NOS1P29475 1434 aa13.87□□□□□ -0.19
CEACAM1-204ENST00000358394 FAM50AQ14320 339 aaKnown RBP13.87□□□□□ -0.19
CEACAM1-204ENST00000358394 SLC26A8Q96RN1 970 aa13.87□□□□□ -0.19
CEACAM1-204ENST00000358394 TET3O43151 1660 aa13.86□□□□□ -0.19
CEACAM1-204ENST00000358394 ADGRB3O60242 1522 aa13.86□□□□□ -0.19
CEACAM1-204ENST00000358394 ADGRL2O95490 1459 aa13.86□□□□□ -0.19
CEACAM1-204ENST00000358394 TMEM94Q12767 1356 aa13.86□□□□□ -0.19
CEACAM1-204ENST00000358394 KCNA6P17658 529 aa13.86□□□□□ -0.19
CEACAM1-204ENST00000358394 SLC52A1Q9NWF4 448 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms