RNA–Protein interactions for RNA: ENST00000358394.7

CEACAM1-204, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, humanhuman

TSL 1 (best) BASIC

Gene CEACAM1, Length 1,484 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM1-204ENST00000358394 NISCHQ9Y2I1 1504 aa22.47■■□□□ 1.19
CEACAM1-204ENST00000358394 AEBP2Q6ZN18 517 aaPredicted RBP20.53■□□□□ 0.88
CEACAM1-204ENST00000358394 ABCC9O60706 1549 aa20.31■□□□□ 0.84
CEACAM1-204ENST00000358394 CCDC180Q9P1Z9 1646 aa20.21■□□□□ 0.83
CEACAM1-204ENST00000358394 RB1CC1Q8TDY2 1594 aa19.28■□□□□ 0.68
CEACAM1-204ENST00000358394 DNAJC5BQ9UF47 199 aa19.27■□□□□ 0.67
CEACAM1-204ENST00000358394 CHIC1Q5VXU3 224 aa19.16■□□□□ 0.66
CEACAM1-204ENST00000358394 NACADO15069 1562 aa19.12■□□□□ 0.65
CEACAM1-204ENST00000358394 DCAF8L2P0C7V8 631 aa19.05■□□□□ 0.64
CEACAM1-204ENST00000358394 PABPN1Q86U42 306 aaKnown RBP eCLIP18.9■□□□□ 0.62
CEACAM1-204ENST00000358394 UNC13AQ9UPW8 1703 aa18.89■□□□□ 0.61
CEACAM1-204ENST00000358394 MYO15BQ96JP2 1530 aa18.81■□□□□ 0.6
CEACAM1-204ENST00000358394 BICRAQ9NZM4 1560 aa18.73■□□□□ 0.59
CEACAM1-204ENST00000358394 ZCCHC6Q5VYS8 1495 aaKnown RBP18.6■□□□□ 0.57
CEACAM1-204ENST00000358394 DCAF1Q9Y4B6 1507 aa18.54■□□□□ 0.56
CEACAM1-204ENST00000358394 SHROOM4Q9ULL8 1493 aa18.43■□□□□ 0.54
CEACAM1-204ENST00000358394 SCRIBQ14160 1630 aa18.43■□□□□ 0.54
CEACAM1-204ENST00000358394 CC2D2AQ9P2K1 1620 aa18.34■□□□□ 0.53
CEACAM1-204ENST00000358394 CECR2Q9BXF3 1484 aa18.3■□□□□ 0.52
CEACAM1-204ENST00000358394 EIF4G1Q04637 1599 aaKnown RBP18.27■□□□□ 0.52
CEACAM1-204ENST00000358394 DNAJC5Q9H3Z4 198 aa17.89■□□□□ 0.45
CEACAM1-204ENST00000358394 NCAPD3P42695 1498 aa17.65■□□□□ 0.42
CEACAM1-204ENST00000358394 SENP3Q9H4L4 574 aaPredicted RBP17.62■□□□□ 0.41
CEACAM1-204ENST00000358394 ATAD2BQ9ULI0 1458 aa17.58■□□□□ 0.41
CEACAM1-204ENST00000358394 SMARCA4P51532 1647 aa17.56■□□□□ 0.4
CEACAM1-204ENST00000358394 ERCC6Q03468 1493 aa17.54■□□□□ 0.4
CEACAM1-204ENST00000358394 SMARCA2P51531 1590 aa17.54■□□□□ 0.4
CEACAM1-204ENST00000358394 CUX2O14529 1486 aa17.52■□□□□ 0.4
CEACAM1-204ENST00000358394 HMGXB3Q12766 1538 aa17.51■□□□□ 0.39
CEACAM1-204ENST00000358394 BAZ1AQ9NRL2 1556 aaPredicted RBP17.45■□□□□ 0.38
CEACAM1-204ENST00000358394 BAZ1BQ9UIG0 1483 aaKnown RBP17.42■□□□□ 0.38
CEACAM1-204ENST00000358394 NESP48681 1621 aa17.42■□□□□ 0.38
CEACAM1-204ENST00000358394 PEG3Q9GZU2 1588 aa17.38■□□□□ 0.37
CEACAM1-204ENST00000358394 MROH2BQ7Z745 1585 aa17.32■□□□□ 0.36
CEACAM1-204ENST00000358394 PHF23Q9BUL5 403 aaPredicted RBP17.29■□□□□ 0.36
CEACAM1-204ENST00000358394 LAMC3Q9Y6N6 1575 aa17.27■□□□□ 0.36
CEACAM1-204ENST00000358394 THOC2Q8NI27 1593 aaKnown RBP17.26■□□□□ 0.35
CEACAM1-204ENST00000358394 KIF21AQ7Z4S6 1674 aa17.21■□□□□ 0.35
CEACAM1-204ENST00000358394 PDS5BQ9NTI5 1447 aa17.17■□□□□ 0.34
CEACAM1-204ENST00000358394 WIZO95785 1651 aa17.13■□□□□ 0.33
CEACAM1-204ENST00000358394 CADPSQ9ULU8 1353 aa17.11■□□□□ 0.33
CEACAM1-204ENST00000358394 MRC2Q9UBG0 1479 aa17.04■□□□□ 0.32
CEACAM1-204ENST00000358394 WDR62O43379 1518 aa16.99■□□□□ 0.31
CEACAM1-204ENST00000358394 CEP164Q9UPV0 1460 aa16.95■□□□□ 0.3
CEACAM1-204ENST00000358394 TRIM41Q8WV44 630 aa16.94■□□□□ 0.3
CEACAM1-204ENST00000358394 RSF1Q96T23 1441 aaPredicted RBP16.93■□□□□ 0.3
CEACAM1-204ENST00000358394 FANCD2Q9BXW9 1451 aa16.92■□□□□ 0.3
CEACAM1-204ENST00000358394 CFTRP13569 1480 aa16.9■□□□□ 0.3
CEACAM1-204ENST00000358394 TOP2AP11388 1531 aaKnown RBP16.88■□□□□ 0.29
CEACAM1-204ENST00000358394 URB2Q14146 1524 aaKnown RBP16.8■□□□□ 0.28
CEACAM1-204ENST00000358394 PRDM2Q13029 1718 aa16.76■□□□□ 0.27
CEACAM1-204ENST00000358394 OSCARQ8IYS5 282 aa16.73■□□□□ 0.27
CEACAM1-204ENST00000358394 CCDC88BA6NC98 1476 aa16.7■□□□□ 0.26
CEACAM1-204ENST00000358394 IFT140Q96RY7 1462 aa16.61■□□□□ 0.25
CEACAM1-204ENST00000358394 ZNF608Q9ULD9 1512 aaPredicted RBP16.6■□□□□ 0.25
CEACAM1-204ENST00000358394 TOPBP1Q92547 1522 aa16.59■□□□□ 0.25
CEACAM1-204ENST00000358394 POTEDQ86YR6 584 aa16.56■□□□□ 0.24
CEACAM1-204ENST00000358394 ABCC8Q09428 1581 aa16.55■□□□□ 0.24
CEACAM1-204ENST00000358394 DNMBPQ6XZF7 1577 aa16.53■□□□□ 0.24
CEACAM1-204ENST00000358394 RIMBP3CA6NJZ7 1639 aa16.52■□□□□ 0.24
CEACAM1-204ENST00000358394 RIMBP3BA6NNM3 1639 aa16.52■□□□□ 0.24
CEACAM1-204ENST00000358394 RIMBP3Q9UFD9 1639 aa16.52■□□□□ 0.24
CEACAM1-204ENST00000358394 FOXD1Q16676 465 aa16.51■□□□□ 0.23
CEACAM1-204ENST00000358394 EIF4G3O43432 1585 aaKnown RBP16.51■□□□□ 0.23
CEACAM1-204ENST00000358394 TARBP1Q13395 1621 aaKnown RBP16.45■□□□□ 0.22
CEACAM1-204ENST00000358394 ARHGEF11O15085 1522 aa16.45■□□□□ 0.22
CEACAM1-204ENST00000358394 AQRO60306 1485 aaKnown RBP eCLIP16.45■□□□□ 0.228e-7■■□□□ 12.2
CEACAM1-204ENST00000358394 CHD1O14646 1710 aa16.43■□□□□ 0.22
CEACAM1-204ENST00000358394 POLA1P09884 1462 aaPredicted RBP16.42■□□□□ 0.22
CEACAM1-204ENST00000358394 FBLN2P98095 1184 aa16.37■□□□□ 0.21
CEACAM1-204ENST00000358394 RAD54L2Q9Y4B4 1467 aa16.37■□□□□ 0.21
CEACAM1-204ENST00000358394 CYB5RLQ6IPT4 315 aa16.35■□□□□ 0.21
CEACAM1-204ENST00000358394 SOGA1O94964 1423 aa16.34■□□□□ 0.21
CEACAM1-204ENST00000358394 TDRD9Q8NDG6 1382 aaKnown RBP16.34■□□□□ 0.21
CEACAM1-204ENST00000358394 FGD5Q6ZNL6 1462 aa16.31■□□□□ 0.2
CEACAM1-204ENST00000358394 CUX1P39880 1505 aa16.28■□□□□ 0.2
CEACAM1-204ENST00000358394 ARAP1Q96P48 1450 aa16.28■□□□□ 0.2
CEACAM1-204ENST00000358394 WDR97A6NE52 1622 aa16.27■□□□□ 0.2
CEACAM1-204ENST00000358394 SNAPC4Q5SXM2 1469 aa16.27■□□□□ 0.19
CEACAM1-204ENST00000358394 CHMP7Q8WUX9 453 aaPredicted RBP16.23■□□□□ 0.19
CEACAM1-204ENST00000358394 MAGI1Q96QZ7 1491 aaPredicted RBP16.21■□□□□ 0.19
CEACAM1-204ENST00000358394 TRHP20396 242 aaPredicted RBP16.21■□□□□ 0.19
CEACAM1-204ENST00000358394 GRIN2BQ13224 1484 aa16.21■□□□□ 0.18
CEACAM1-204ENST00000358394 CLASP1Q7Z460 1538 aa16.2■□□□□ 0.18
CEACAM1-204ENST00000358394 SYNJ1O43426 1573 aa16.19■□□□□ 0.18
CEACAM1-204ENST00000358394 SYNJ2O15056 1496 aa16.17■□□□□ 0.18
CEACAM1-204ENST00000358394 PBRM1Q86U86 1689 aa16.17■□□□□ 0.18
CEACAM1-204ENST00000358394 SUPT5HO00267 1087 aaKnown RBP16.15■□□□□ 0.18
CEACAM1-204ENST00000358394 GAPVD1Q14C86 1478 aa16.15■□□□□ 0.18
CEACAM1-204ENST00000358394 ABCA10Q8WWZ4 1543 aa16.11■□□□□ 0.17
CEACAM1-204ENST00000358394 ABCA5Q8WWZ7 1642 aa16.09■□□□□ 0.17
CEACAM1-204ENST00000358394 WRNQ14191 1432 aaPredicted RBP eCLIP16.03■□□□□ 0.16
CEACAM1-204ENST00000358394 BIVM-ERCC5R4GMW8 1640 aa16■□□□□ 0.15
CEACAM1-204ENST00000358394 GRIN2AQ12879 1464 aa16■□□□□ 0.15
CEACAM1-204ENST00000358394 TOP2BQ02880 1626 aa15.99■□□□□ 0.15
CEACAM1-204ENST00000358394 ADAMTS12P58397 1594 aa15.98■□□□□ 0.15
CEACAM1-204ENST00000358394 CEP170Q5SW79 1584 aa15.95■□□□□ 0.14
CEACAM1-204ENST00000358394 ERCC6L2Q5T890 1561 aa15.95■□□□□ 0.14
CEACAM1-204ENST00000358394 NUP160Q12769 1436 aa15.95■□□□□ 0.14
CEACAM1-204ENST00000358394 FHAD1B1AJZ9 1412 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms