RNA–Protein interactions for RNA: YPR039W

YPR039W, Transcript of Dubious open reading frame, yeast

Gene YPR039W, Length 336 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YPR039W	YPR039W	TY1A-ML1	Q04706	440 aa	Known RBP	6.02	□□□□□ -1.45
YPR039W	YPR039W	TY1A-BR	Q12217	440 aa		6.02	□□□□□ -1.45
YPR039W	YPR039W	TY1A-NL2	Q12470	440 aa		6.02	□□□□□ -1.45
YPR039W	YPR039W	TY1A-GR2	Q12485	440 aa		6.02	□□□□□ -1.45
YPR039W	YPR039W	SAS10	Q12136	610 aa	Predicted RBP	6.01	□□□□□ -1.45
YPR039W	YPR039W	ERF2	Q06551	359 aa		5.99	□□□□□ -1.45
YPR039W	YPR039W	MAM3	Q12296	706 aa		5.98	□□□□□ -1.45
YPR039W	YPR039W	KEX2	P13134	814 aa		5.97	□□□□□ -1.45
YPR039W	YPR039W	MRF1	P30775	413 aa	Predicted RBP	5.97	□□□□□ -1.45
YPR039W	YPR039W	IES2	P40154	320 aa		5.97	□□□□□ -1.45
YPR039W	YPR039W	YEL077C	Q3E7X8	1277 aa		5.97	□□□□□ -1.45
YPR039W	YPR039W	SPB4	P25808	606 aa	Predicted RBP	5.96	□□□□□ -1.46
YPR039W	YPR039W	DSF2	P38213	736 aa		5.95	□□□□□ -1.46
YPR039W	YPR039W	CST6	P40535	587 aa		5.95	□□□□□ -1.46
YPR039W	YPR039W	RRN7	P40992	514 aa		5.95	□□□□□ -1.46
YPR039W	YPR039W	ERG12	P07277	443 aa		5.94	□□□□□ -1.46
YPR039W	YPR039W	PSE1	P32337	1089 aa	Known RBP	5.94	□□□□□ -1.46
YPR039W	YPR039W	SPT16	P32558	1035 aa	Known RBP	5.94	□□□□□ -1.46
YPR039W	YPR039W	CLA4	P48562	842 aa		5.93	□□□□□ -1.46
YPR039W	YPR039W	NUP42	P49686	430 aa	Known RBP	5.93	□□□□□ -1.46
YPR039W	YPR039W	DIT2	P21595	489 aa		5.92	□□□□□ -1.46
YPR039W	YPR039W	TRK1	P12685	1235 aa		5.91	□□□□□ -1.46
YPR039W	YPR039W	FRK1	Q03002	865 aa	Predicted RBP	5.91	□□□□□ -1.46
YPR039W	YPR039W	AIR1	P40507	360 aa	Known RBP	5.9	□□□□□ -1.46
YPR039W	YPR039W	LAM6	Q08001	693 aa		5.88	□□□□□ -1.47
YPR039W	YPR039W	PAC1	P39946	494 aa	Known RBP	5.87	□□□□□ -1.47
YPR039W	YPR039W	BDP1	P46678	594 aa		5.87	□□□□□ -1.47
YPR039W	YPR039W	TEA1	P47988	759 aa		5.86	□□□□□ -1.47
YPR039W	YPR039W	PAT1	P25644	796 aa	Known RBP	5.85	□□□□□ -1.47
YPR039W	YPR039W	CLB5	P30283	435 aa		5.85	□□□□□ -1.47
YPR039W	YPR039W	NIS1	P53939	407 aa		5.85	□□□□□ -1.47
YPR039W	YPR039W	AGE1	Q04412	482 aa		5.85	□□□□□ -1.47
YPR039W	YPR039W	TUB4	P53378	473 aa		5.84	□□□□□ -1.47
YPR039W	YPR039W	YNL115C	P53925	644 aa		5.83	□□□□□ -1.48
YPR039W	YPR039W	SIT4	P20604	311 aa		5.81	□□□□□ -1.48
YPR039W	YPR039W	PUS5	Q06244	254 aa		5.8	□□□□□ -1.48
YPR039W	YPR039W	MOD5	P07884	428 aa		5.79	□□□□□ -1.48
YPR039W	YPR039W	SCJ1	P25303	377 aa		5.79	□□□□□ -1.48
YPR039W	YPR039W	RTF1	P53064	558 aa		5.79	□□□□□ -1.48
YPR039W	YPR039W	FPK1	P53739	893 aa		5.79	□□□□□ -1.48
YPR039W	YPR039W	SLY41	P22215	453 aa		5.77	□□□□□ -1.49
YPR039W	YPR039W	RQC2	Q12532	1038 aa	Known RBP	5.77	□□□□□ -1.49
YPR039W	YPR039W	BRE2	P43132	505 aa		5.75	□□□□□ -1.49
YPR039W	YPR039W	HED1	Q03937	162 aa		5.75	□□□□□ -1.49
YPR039W	YPR039W	YMR196W	Q04336	1088 aa		5.75	□□□□□ -1.49
YPR039W	YPR039W	CDC4	P07834	779 aa		5.74	□□□□□ -1.49
YPR039W	YPR039W	GLC3	P32775	704 aa		5.74	□□□□□ -1.49
YPR039W	YPR039W	ATF2	P53296	535 aa		5.73	□□□□□ -1.49
YPR039W	YPR039W	MET32	Q12041	191 aa		5.72	□□□□□ -1.49
YPR039W	YPR039W	KXD1	P53158	218 aa		5.71	□□□□□ -1.5
YPR039W	YPR039W	TYW1	Q08960	810 aa	Known RBP	5.71	□□□□□ -1.5
YPR039W	YPR039W	PDC1	P06169	563 aa	Known RBP	5.7	□□□□□ -1.5
YPR039W	YPR039W	ASH1	P34233	588 aa		5.7	□□□□□ -1.5
YPR039W	YPR039W	GCR2	Q01722	534 aa		5.7	□□□□□ -1.5
YPR039W	YPR039W	ESS1	P22696	170 aa		5.69	□□□□□ -1.5
YPR039W	YPR039W	GAR1	P28007	205 aa	Known RBP	5.69	□□□□□ -1.5
YPR039W	YPR039W	HXT10	P43581	546 aa		5.69	□□□□□ -1.5
YPR039W	YPR039W	MMP1	Q12372	583 aa		5.69	□□□□□ -1.5
YPR039W	YPR039W	RGA1	P39083	1007 aa		5.68	□□□□□ -1.5
YPR039W	YPR039W	PUS6	P53294	404 aa		5.68	□□□□□ -1.5
YPR039W	YPR039W	HST2	P53686	357 aa		5.68	□□□□□ -1.5
YPR039W	YPR039W	YNR021W	P53723	404 aa	Known RBP	5.68	□□□□□ -1.5
YPR039W	YPR039W	YDL206W	Q12424	762 aa		5.68	□□□□□ -1.5
YPR039W	YPR039W	TRM1	P15565	570 aa	Known RBP	5.67	□□□□□ -1.5
YPR039W	YPR039W	YJU3	P28321	313 aa		5.66	□□□□□ -1.5
YPR039W	YPR039W	GLN1	P32288	370 aa	Known RBP	5.66	□□□□□ -1.5
YPR039W	YPR039W	RRD1	P40454	393 aa	Known RBP	5.66	□□□□□ -1.5
YPR039W	YPR039W	TBF1	Q02457	562 aa		5.66	□□□□□ -1.5
YPR039W	YPR039W	TPD3	P31383	635 aa		5.65	□□□□□ -1.5
YPR039W	YPR039W	KTR1	P27810	393 aa	Known RBP	5.64	□□□□□ -1.51
YPR039W	YPR039W	MET22	P32179	357 aa		5.64	□□□□□ -1.51
YPR039W	YPR039W	RPA14	P50106	137 aa		5.64	□□□□□ -1.51
YPR039W	YPR039W	HST3	P53687	447 aa		5.64	□□□□□ -1.51
YPR039W	YPR039W	AFT1	P22149	690 aa		5.63	□□□□□ -1.51
YPR039W	YPR039W	YPR097W	Q06839	1073 aa		5.63	□□□□□ -1.51
YPR039W	YPR039W	ALR1	Q08269	859 aa		5.63	□□□□□ -1.51
YPR039W	YPR039W	SYH1	Q02875	849 aa	Known RBP	5.62	□□□□□ -1.51
YPR039W	YPR039W	GBP2	P25555	427 aa	Known RBP RIP-Chip data	5.61	□□□□□ -1.51	not detected
YPR039W	YPR039W	KIP2	P28743	706 aa		5.61	□□□□□ -1.51
YPR039W	YPR039W	BUB1	P41695	1021 aa	Known RBP RIP-Chip data	5.61	□□□□□ -1.51	not detected
YPR039W	YPR039W	YJR115W	P47152	169 aa		5.61	□□□□□ -1.51
YPR039W	YPR039W	ITT1	Q04638	464 aa		5.6	□□□□□ -1.51
YPR039W	YPR039W	IXR1	P33417	597 aa		5.59	□□□□□ -1.51
YPR039W	YPR039W	RSC30	P38781	883 aa		5.59	□□□□□ -1.51
YPR039W	YPR039W	YPL062W	Q02781	134 aa		5.59	□□□□□ -1.51
YPR039W	YPR039W	PKH3	Q03306	898 aa	Predicted RBP	5.59	□□□□□ -1.51
YPR039W	YPR039W	RGA2	Q06407	1009 aa		5.58	□□□□□ -1.52
YPR039W	YPR039W	ENV9	Q08651	330 aa		5.58	□□□□□ -1.52
YPR039W	YPR039W	CSN12	P47130	423 aa		5.57	□□□□□ -1.52
YPR039W	YPR039W	YDR444W	Q04093	687 aa		5.57	□□□□□ -1.52
YPR039W	YPR039W	AIM7	Q12156	149 aa		5.57	□□□□□ -1.52
YPR039W	YPR039W	ARG8	P18544	423 aa		5.56	□□□□□ -1.52
YPR039W	YPR039W	UGA3	P26370	528 aa		5.54	□□□□□ -1.52
YPR039W	YPR039W	MSB3	P48566	633 aa	Predicted RBP	5.53	□□□□□ -1.52
YPR039W	YPR039W	LCB5	Q06147	687 aa	Known RBP	5.53	□□□□□ -1.52
YPR039W	YPR039W	VAC17	P25591	423 aa		5.52	□□□□□ -1.53
YPR039W	YPR039W	KIN1	P13185	1064 aa		5.51	□□□□□ -1.53
YPR039W	YPR039W	MRT4	P33201	236 aa	Known RBP	5.51	□□□□□ -1.53
YPR039W	YPR039W	PTK2	P47116	818 aa	Known RBP	5.51	□□□□□ -1.53
YPR039W	YPR039W	APP1	P53933	587 aa		5.51	□□□□□ -1.53

Retrieved 100 of 5,963 RNA–protein pairs in 16.4 ms