RNA–Protein interactions for RNA: YML046W

PRP39, Transcript of U1 snRNP protein involved in splicing, yeastyeast

Gene PRP39, Length 1,890 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP39YML046W TY1A-ER2P0CX66 440 aa5.26□□□□□ -1.57
PRP39YML046W TY1A-GR3P0CX67 440 aa5.26□□□□□ -1.57
PRP39YML046W TY1A-LR1P0CX68 440 aa5.26□□□□□ -1.57
PRP39YML046W TY1A-MR2P0CX69 440 aa5.26□□□□□ -1.57
PRP39YML046W TY1A-JR2P47099 440 aa5.26□□□□□ -1.57
PRP39YML046W TY1A-DR1Q03856 440 aa5.26□□□□□ -1.57
PRP39YML046W YDR444WQ04093 687 aa5.26□□□□□ -1.57
PRP39YML046W TY1A-ML1Q04706 440 aaKnown RBP5.26□□□□□ -1.57
PRP39YML046W TY1A-BRQ12217 440 aa5.26□□□□□ -1.57
PRP39YML046W TY1A-NL2Q12470 440 aa5.26□□□□□ -1.57
PRP39YML046W TY1A-GR2Q12485 440 aa5.26□□□□□ -1.57
PRP39YML046W BDP1P46678 594 aa5.25□□□□□ -1.57
PRP39YML046W IFH1P39520 1085 aa5.24□□□□□ -1.57
PRP39YML046W SEC2P17065 759 aa5.23□□□□□ -1.57
PRP39YML046W RRN7P40992 514 aa5.23□□□□□ -1.57
PRP39YML046W HED1Q03937 162 aa5.23□□□□□ -1.57
PRP39YML046W PAT1P25644 796 aaKnown RBP5.22□□□□□ -1.57
PRP39YML046W LCB5Q06147 687 aaKnown RBP5.2□□□□□ -1.58
PRP39YML046W ORC6P38826 435 aa5.19□□□□□ -1.58
PRP39YML046W YDL176WQ12027 708 aa5.17□□□□□ -1.58
PRP39YML046W ASH1P34233 588 aa5.16□□□□□ -1.58
PRP39YML046W HST3P53687 447 aa5.15□□□□□ -1.59
PRP39YML046W AFT1P22149 690 aa5.14□□□□□ -1.59
PRP39YML046W REF2P42073 533 aaPredicted RBP5.14□□□□□ -1.59
PRP39YML046W MET32Q12041 191 aa5.14□□□□□ -1.59
PRP39YML046W MVP1P40959 511 aaKnown RBP5.13□□□□□ -1.59
PRP39YML046W RRD1P40454 393 aaKnown RBP5.11□□□□□ -1.59
PRP39YML046W YPR109WQ06104 294 aa5.11□□□□□ -1.59
PRP39YML046W MTC5Q03897 1148 aa5.09□□□□□ -1.59
PRP39YML046W KEX2P13134 814 aa5.09□□□□□ -1.6
PRP39YML046W MOD5P07884 428 aa5.07□□□□□ -1.6
PRP39YML046W RGR1P19263 1082 aa5.07□□□□□ -1.6
PRP39YML046W PAC1P39946 494 aaKnown RBP5.07□□□□□ -1.6
PRP39YML046W YJR115WP47152 169 aa5.07□□□□□ -1.6
PRP39YML046W ERF2Q06551 359 aa5.07□□□□□ -1.6
PRP39YML046W MAK21Q12176 1025 aaKnown RBP5.07□□□□□ -1.6
PRP39YML046W PUS5Q06244 254 aa5.06□□□□□ -1.6
PRP39YML046W COX6P00427 148 aa5.05□□□□□ -1.6
PRP39YML046W YPR148CQ06523 435 aa5.05□□□□□ -1.6
PRP39YML046W CAF120P53836 1060 aa5.04□□□□□ -1.6
PRP39YML046W TUB4P53378 473 aa5□□□□□ -1.61
PRP39YML046W ACO2P39533 789 aa5□□□□□ -1.61
PRP39YML046W MSB3P48566 633 aaPredicted RBP5□□□□□ -1.61
PRP39YML046W AGE1Q04412 482 aa5□□□□□ -1.61
PRP39YML046W TRK2P28584 889 aa4.98□□□□□ -1.61
PRP39YML046W YGR035CP53222 116 aa4.98□□□□□ -1.61
PRP39YML046W VPS70P47161 811 aa4.96□□□□□ -1.61
PRP39YML046W YLR346CQ06139 101 aa4.96□□□□□ -1.61
PRP39YML046W OPT2Q06593 877 aa4.96□□□□□ -1.62
PRP39YML046W UGA3P26370 528 aa4.95□□□□□ -1.62
PRP39YML046W SYH1Q02875 849 aaKnown RBP4.95□□□□□ -1.62
PRP39YML046W SRF1Q12516 437 aa4.95□□□□□ -1.62
PRP39YML046W RTF1P53064 558 aa4.94□□□□□ -1.62
PRP39YML046W KXD1P53158 218 aa4.94□□□□□ -1.62
PRP39YML046W CLB5P30283 435 aa4.94□□□□□ -1.62
PRP39YML046W PTK2P47116 818 aaKnown RBP4.94□□□□□ -1.62
PRP39YML046W TPD3P31383 635 aa4.92□□□□□ -1.62
PRP39YML046W PSE1P32337 1089 aaKnown RBP4.92□□□□□ -1.62
PRP39YML046W YNL115CP53925 644 aa4.92□□□□□ -1.62
PRP39YML046W GLY1P37303 387 aaKnown RBP4.91□□□□□ -1.62
PRP39YML046W YIR007WP40566 764 aa4.9□□□□□ -1.62
PRP39YML046W HPF1Q05164 967 aa4.9□□□□□ -1.62
PRP39YML046W HXT10P43581 546 aa4.9□□□□□ -1.63
PRP39YML046W SCW11P53189 542 aa4.9□□□□□ -1.63
PRP39YML046W TYW1Q08960 810 aaKnown RBP4.9□□□□□ -1.63
PRP39YML046W NUP85P46673 744 aa4.88□□□□□ -1.63
PRP39YML046W PDC1P06169 563 aaKnown RBP4.86□□□□□ -1.63
PRP39YML046W MIP1P15801 1254 aa4.86□□□□□ -1.63
PRP39YML046W YPR204WQ08995 1032 aa4.86□□□□□ -1.63
PRP39YML046W KIP2P28743 706 aa4.86□□□□□ -1.63
PRP39YML046W TY1A-BLQ12266 440 aa4.86□□□□□ -1.63
PRP39YML046W PUS1Q12211 544 aaKnown RBP4.84□□□□□ -1.63
PRP39YML046W SIT4P20604 311 aa4.83□□□□□ -1.64
PRP39YML046W RTT106P40161 455 aa4.83□□□□□ -1.64
PRP39YML046W ICP55P40051 511 aa4.83□□□□□ -1.64
PRP39YML046W MRT4P33201 236 aaKnown RBP4.82□□□□□ -1.64
PRP39YML046W LSB3P43603 459 aaKnown RBP4.82□□□□□ -1.64
PRP39YML046W IXR1P33417 597 aa4.81□□□□□ -1.64
PRP39YML046W ALR1Q08269 859 aa4.81□□□□□ -1.64
PRP39YML046W PBS2P08018 668 aa4.8□□□□□ -1.64
PRP39YML046W LSC2P53312 427 aa4.79□□□□□ -1.64
PRP39YML046W TEA1P47988 759 aa4.79□□□□□ -1.64
PRP39YML046W UBP2Q01476 1272 aa4.79□□□□□ -1.64
PRP39YML046W RPA14P50106 137 aa4.78□□□□□ -1.64
PRP39YML046W TBF1Q02457 562 aa4.78□□□□□ -1.64
PRP39YML046W DPH6Q12429 685 aa4.78□□□□□ -1.64
PRP39YML046W SLY41P22215 453 aa4.77□□□□□ -1.65
PRP39YML046W NIS1P53939 407 aa4.77□□□□□ -1.65
PRP39YML046W PHM7Q12252 991 aa4.77□□□□□ -1.65
PRP39YML046W ARG82P07250 355 aa4.77□□□□□ -1.65
PRP39YML046W MAM3Q12296 706 aa4.77□□□□□ -1.65
PRP39YML046W YDL206WQ12424 762 aa4.77□□□□□ -1.65
PRP39YML046W CKB1P43639 278 aa4.76□□□□□ -1.65
PRP39YML046W YPR097WQ06839 1073 aa4.76□□□□□ -1.65
PRP39YML046W AAD14P42884 376 aa4.75□□□□□ -1.65
PRP39YML046W ROG3P43602 733 aa4.75□□□□□ -1.65
PRP39YML046W YJR098CP47139 656 aa4.73□□□□□ -1.65
PRP39YML046W PUS6P53294 404 aa4.73□□□□□ -1.65
PRP39YML046W YMR196WQ04336 1088 aa4.73□□□□□ -1.65
PRP39YML046W TCB1Q12466 1186 aa4.73□□□□□ -1.65
Retrieved 100 of 5,963 RNA–protein pairs in 19.6 ms