RNA–Protein interactions for RNA: YJR055W

HIT1, Transcript of Protein involved in C/D snoRNP assembly, yeastyeast

Gene HIT1, Length 495 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HIT1YJR055W TY1A-ML1Q04706 440 aaKnown RBP6.57□□□□□ -1.36
HIT1YJR055W TY1A-BRQ12217 440 aa6.57□□□□□ -1.36
HIT1YJR055W TY1A-NL2Q12470 440 aa6.57□□□□□ -1.36
HIT1YJR055W TY1A-GR2Q12485 440 aa6.57□□□□□ -1.36
HIT1YJR055W TRK1P12685 1235 aa6.56□□□□□ -1.36
HIT1YJR055W SEC2P17065 759 aa6.56□□□□□ -1.36
HIT1YJR055W GCD11P32481 527 aaKnown RBP6.56□□□□□ -1.36
HIT1YJR055W RGA1P39083 1007 aa6.56□□□□□ -1.36
HIT1YJR055W DMA1P38823 416 aa6.54□□□□□ -1.36
HIT1YJR055W ERG12P07277 443 aa6.53□□□□□ -1.36
HIT1YJR055W SAS10Q12136 610 aaPredicted RBP6.52□□□□□ -1.37
HIT1YJR055W PSE1P32337 1089 aaKnown RBP6.51□□□□□ -1.37
HIT1YJR055W SPT16P32558 1035 aaKnown RBP6.51□□□□□ -1.37
HIT1YJR055W CST6P40535 587 aa6.51□□□□□ -1.37
HIT1YJR055W MAM3Q12296 706 aa6.5□□□□□ -1.37
HIT1YJR055W DSF2P38213 736 aa6.48□□□□□ -1.37
HIT1YJR055W RRN7P40992 514 aa6.48□□□□□ -1.37
HIT1YJR055W ERF2Q06551 359 aa6.48□□□□□ -1.37
HIT1YJR055W KEX2P13134 814 aa6.47□□□□□ -1.37
HIT1YJR055W LAM6Q08001 693 aa6.47□□□□□ -1.37
HIT1YJR055W CLA4P48562 842 aa6.46□□□□□ -1.38
HIT1YJR055W IES2P40154 320 aa6.45□□□□□ -1.38
HIT1YJR055W PAT1P25644 796 aaKnown RBP6.44□□□□□ -1.38
HIT1YJR055W CLB5P30283 435 aa6.44□□□□□ -1.38
HIT1YJR055W AIR1P40507 360 aaKnown RBP6.44□□□□□ -1.38
HIT1YJR055W NUP42P49686 430 aaKnown RBP6.43□□□□□ -1.38
HIT1YJR055W FRK1Q03002 865 aaPredicted RBP6.43□□□□□ -1.38
HIT1YJR055W BDP1P46678 594 aa6.42□□□□□ -1.38
HIT1YJR055W PAC1P39946 494 aaKnown RBP6.4□□□□□ -1.38
HIT1YJR055W AGE1Q04412 482 aa6.39□□□□□ -1.39
HIT1YJR055W SPB4P25808 606 aaPredicted RBP6.38□□□□□ -1.39
HIT1YJR055W BRE2P43132 505 aa6.38□□□□□ -1.39
HIT1YJR055W RTF1P53064 558 aa6.38□□□□□ -1.39
HIT1YJR055W SIT4P20604 311 aa6.37□□□□□ -1.39
HIT1YJR055W DIT2P21595 489 aa6.37□□□□□ -1.39
HIT1YJR055W TEA1P47988 759 aa6.37□□□□□ -1.39
HIT1YJR055W TUB4P53378 473 aa6.37□□□□□ -1.39
HIT1YJR055W CDC4P07834 779 aa6.36□□□□□ -1.39
HIT1YJR055W MOD5P07884 428 aa6.36□□□□□ -1.39
HIT1YJR055W YNL115CP53925 644 aa6.36□□□□□ -1.39
HIT1YJR055W HED1Q03937 162 aa6.35□□□□□ -1.39
HIT1YJR055W NIS1P53939 407 aa6.34□□□□□ -1.39
HIT1YJR055W GCR2Q01722 534 aa6.33□□□□□ -1.4
HIT1YJR055W PUS5Q06244 254 aa6.29□□□□□ -1.4
HIT1YJR055W FPK1P53739 893 aa6.28□□□□□ -1.4
HIT1YJR055W MET32Q12041 191 aa6.28□□□□□ -1.4
HIT1YJR055W SLY41P22215 453 aa6.26□□□□□ -1.41
HIT1YJR055W TPD3P31383 635 aa6.25□□□□□ -1.41
HIT1YJR055W KXD1P53158 218 aa6.25□□□□□ -1.41
HIT1YJR055W YMR196WQ04336 1088 aa6.25□□□□□ -1.41
HIT1YJR055W GAR1P28007 205 aaKnown RBP6.24□□□□□ -1.41
HIT1YJR055W ASH1P34233 588 aa6.24□□□□□ -1.41
HIT1YJR055W HXT10P43581 546 aa6.24□□□□□ -1.41
HIT1YJR055W YPL062WQ02781 134 aa6.24□□□□□ -1.41
HIT1YJR055W PDC1P06169 563 aaKnown RBP6.23□□□□□ -1.41
HIT1YJR055W AFT1P22149 690 aa6.23□□□□□ -1.41
HIT1YJR055W MET22P32179 357 aa6.22□□□□□ -1.41
HIT1YJR055W RRD1P40454 393 aaKnown RBP6.22□□□□□ -1.41
HIT1YJR055W SCJ1P25303 377 aa6.21□□□□□ -1.42
HIT1YJR055W HST2P53686 357 aa6.21□□□□□ -1.42
HIT1YJR055W HST3P53687 447 aa6.21□□□□□ -1.42
HIT1YJR055W PUS6P53294 404 aa6.2□□□□□ -1.42
HIT1YJR055W ENV9Q08651 330 aa6.2□□□□□ -1.42
HIT1YJR055W ATF2P53296 535 aa6.19□□□□□ -1.42
HIT1YJR055W YDL206WQ12424 762 aa6.19□□□□□ -1.42
HIT1YJR055W GBP2P25555 427 aaKnown RBP RIP-Chip data6.18□□□□□ -1.42not detected
HIT1YJR055W RPA14P50106 137 aa6.18□□□□□ -1.42
HIT1YJR055W YNR021WP53723 404 aaKnown RBP6.18□□□□□ -1.42
HIT1YJR055W TBF1Q02457 562 aa6.18□□□□□ -1.42
HIT1YJR055W TRM1P15565 570 aaKnown RBP6.17□□□□□ -1.42
HIT1YJR055W SYH1Q02875 849 aaKnown RBP6.17□□□□□ -1.42
HIT1YJR055W YPR097WQ06839 1073 aa6.17□□□□□ -1.42
HIT1YJR055W ALR1Q08269 859 aa6.17□□□□□ -1.42
HIT1YJR055W MMP1Q12372 583 aa6.17□□□□□ -1.42
HIT1YJR055W GLC3P32775 704 aa6.16□□□□□ -1.42
HIT1YJR055W BUB1P41695 1021 aaKnown RBP RIP-Chip data6.16□□□□□ -1.42not detected
HIT1YJR055W YDR444WQ04093 687 aa6.16□□□□□ -1.42
HIT1YJR055W GLN1P32288 370 aaKnown RBP6.15□□□□□ -1.42
HIT1YJR055W YJR115WP47152 169 aa6.15□□□□□ -1.42
HIT1YJR055W ESS1P22696 170 aa6.13□□□□□ -1.43
HIT1YJR055W MSB3P48566 633 aaPredicted RBP6.13□□□□□ -1.43
HIT1YJR055W LCB5Q06147 687 aaKnown RBP6.13□□□□□ -1.43
HIT1YJR055W KIP2P28743 706 aa6.12□□□□□ -1.43
HIT1YJR055W YJU3P28321 313 aa6.11□□□□□ -1.43
HIT1YJR055W TYW1Q08960 810 aaKnown RBP6.11□□□□□ -1.43
HIT1YJR055W IXR1P33417 597 aa6.1□□□□□ -1.43
HIT1YJR055W UGA3P26370 528 aa6.08□□□□□ -1.44
HIT1YJR055W KTR1P27810 393 aaKnown RBP6.08□□□□□ -1.44
HIT1YJR055W MRT4P33201 236 aaKnown RBP6.08□□□□□ -1.44
HIT1YJR055W RSC30P38781 883 aa6.08□□□□□ -1.44
HIT1YJR055W YDL176WQ12027 708 aa6.08□□□□□ -1.44
HIT1YJR055W AIM7Q12156 149 aa6.08□□□□□ -1.44
HIT1YJR055W PTK2P47116 818 aaKnown RBP6.06□□□□□ -1.44
HIT1YJR055W VAC17P25591 423 aa6.05□□□□□ -1.44
HIT1YJR055W PKH3Q03306 898 aaPredicted RBP6.05□□□□□ -1.44
HIT1YJR055W RTT106P40161 455 aa6.02□□□□□ -1.45
HIT1YJR055W CSN12P47130 423 aa6.02□□□□□ -1.45
HIT1YJR055W OPT2Q06593 877 aa6.02□□□□□ -1.45
HIT1YJR055W SRF1Q12516 437 aa6.02□□□□□ -1.45
HIT1YJR055W ARG8P18544 423 aa6□□□□□ -1.45
Retrieved 100 of 5,963 RNA–protein pairs in 15.3 ms