RNA–Protein interactions for RNA: YHR066W

SSF1, Transcript of Constituent of 66S pre-ribosomal particles, yeastyeast

Gene SSF1, Length 1,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSF1YHR066W TY1A-MR2P0CX69 440 aa6.08□□□□□ -1.44
SSF1YHR066W TY1A-JR2P47099 440 aa6.08□□□□□ -1.44
SSF1YHR066W PEX21P50091 288 aa6.08□□□□□ -1.44
SSF1YHR066W YDR090CQ03193 310 aa6.08□□□□□ -1.44
SSF1YHR066W TY1A-DR1Q03856 440 aa6.08□□□□□ -1.44
SSF1YHR066W TY1A-ML1Q04706 440 aaKnown RBP6.08□□□□□ -1.44
SSF1YHR066W ENV9Q08651 330 aa6.08□□□□□ -1.44
SSF1YHR066W TY1A-BRQ12217 440 aa6.08□□□□□ -1.44
SSF1YHR066W TY1A-NL2Q12470 440 aa6.08□□□□□ -1.44
SSF1YHR066W TY1A-GR2Q12485 440 aa6.08□□□□□ -1.44
SSF1YHR066W SEC2P17065 759 aa6.06□□□□□ -1.44
SSF1YHR066W FRK1Q03002 865 aaPredicted RBP6.06□□□□□ -1.44
SSF1YHR066W PBS2P08018 668 aa6.06□□□□□ -1.44
SSF1YHR066W TUM1Q08686 304 aaKnown RBP6.05□□□□□ -1.44
SSF1YHR066W TFB4Q12004 338 aa6.05□□□□□ -1.44
SSF1YHR066W SPB4P25808 606 aaPredicted RBP6.04□□□□□ -1.44
SSF1YHR066W SPT16P32558 1035 aaKnown RBP6.04□□□□□ -1.44
SSF1YHR066W DSF2P38213 736 aa6.03□□□□□ -1.44
SSF1YHR066W BDP1P46678 594 aa6.03□□□□□ -1.44
SSF1YHR066W CSC1Q06538 782 aa6.03□□□□□ -1.44
SSF1YHR066W COX6P00427 148 aa6.02□□□□□ -1.45
SSF1YHR066W GCD11P32481 527 aaKnown RBP6.02□□□□□ -1.45
SSF1YHR066W NPL4P33755 580 aa6.01□□□□□ -1.45
SSF1YHR066W YDR444WQ04093 687 aa6.01□□□□□ -1.45
SSF1YHR066W YDL176WQ12027 708 aa6.01□□□□□ -1.45
SSF1YHR066W MAK21Q12176 1025 aaKnown RBP6□□□□□ -1.45
SSF1YHR066W KIC1P38692 1080 aa5.99□□□□□ -1.45
SSF1YHR066W HED1Q03937 162 aa5.99□□□□□ -1.45
SSF1YHR066W LEU3P08638 886 aa5.97□□□□□ -1.45
SSF1YHR066W RRN7P40992 514 aa5.97□□□□□ -1.45
SSF1YHR066W MAM3Q12296 706 aa5.97□□□□□ -1.45
SSF1YHR066W LCB5Q06147 687 aaKnown RBP5.96□□□□□ -1.45
SSF1YHR066W ORC6P38826 435 aa5.95□□□□□ -1.46
SSF1YHR066W IES2P40154 320 aa5.94□□□□□ -1.46
SSF1YHR066W NUP42P49686 430 aaKnown RBP5.93□□□□□ -1.46
SSF1YHR066W MET32Q12041 191 aa5.93□□□□□ -1.46
SSF1YHR066W DIT2P21595 489 aa5.92□□□□□ -1.46
SSF1YHR066W ASH1P34233 588 aa5.92□□□□□ -1.46
SSF1YHR066W AFT1P22149 690 aa5.89□□□□□ -1.47
SSF1YHR066W PAT1P25644 796 aaKnown RBP5.89□□□□□ -1.47
SSF1YHR066W MVP1P40959 511 aaKnown RBP5.89□□□□□ -1.47
SSF1YHR066W RRD1P40454 393 aaKnown RBP5.86□□□□□ -1.47
SSF1YHR066W YNR021WP53723 404 aaKnown RBP5.85□□□□□ -1.47
SSF1YHR066W YPR109WQ06104 294 aa5.85□□□□□ -1.47
SSF1YHR066W ERF2Q06551 359 aa5.85□□□□□ -1.47
SSF1YHR066W MOD5P07884 428 aa5.84□□□□□ -1.47
SSF1YHR066W PSE1P32337 1089 aaKnown RBP5.84□□□□□ -1.47
SSF1YHR066W HST3P53687 447 aa5.84□□□□□ -1.47
SSF1YHR066W KEX2P13134 814 aa5.83□□□□□ -1.48
SSF1YHR066W RGR1P19263 1082 aa5.83□□□□□ -1.48
SSF1YHR066W PAC1P39946 494 aaKnown RBP5.83□□□□□ -1.48
SSF1YHR066W MTC5Q03897 1148 aa5.83□□□□□ -1.48
SSF1YHR066W GLC3P32775 704 aa5.82□□□□□ -1.48
SSF1YHR066W RPN1P38764 993 aaKnown RBP5.81□□□□□ -1.48
SSF1YHR066W YJR115WP47152 169 aa5.81□□□□□ -1.48
SSF1YHR066W PUS5Q06244 254 aa5.81□□□□□ -1.48
SSF1YHR066W LEO1P38439 464 aa5.8□□□□□ -1.48
SSF1YHR066W CAF120P53836 1060 aa5.78□□□□□ -1.48
SSF1YHR066W AGE1Q04412 482 aa5.78□□□□□ -1.48
SSF1YHR066W ATF2P53296 535 aa5.77□□□□□ -1.49
SSF1YHR066W AIM7Q12156 149 aa5.77□□□□□ -1.49
SSF1YHR066W ACO2P39533 789 aa5.76□□□□□ -1.49
SSF1YHR066W TEA1P47988 759 aa5.74□□□□□ -1.49
SSF1YHR066W KIN1P13185 1064 aa5.73□□□□□ -1.49
SSF1YHR066W CLB5P30283 435 aa5.73□□□□□ -1.49
SSF1YHR066W TUB4P53378 473 aa5.73□□□□□ -1.49
SSF1YHR066W TRK2P28584 889 aa5.71□□□□□ -1.5
SSF1YHR066W MSB3P48566 633 aaPredicted RBP5.71□□□□□ -1.5
SSF1YHR066W NIS1P53939 407 aa5.7□□□□□ -1.5
SSF1YHR066W OPT2Q06593 877 aa5.69□□□□□ -1.5
SSF1YHR066W YGR035CP53222 116 aa5.67□□□□□ -1.5
SSF1YHR066W SIT4P20604 311 aa5.67□□□□□ -1.5
SSF1YHR066W FPK1P53739 893 aa5.67□□□□□ -1.5
SSF1YHR066W PTK2P47116 818 aaKnown RBP5.65□□□□□ -1.51
SSF1YHR066W KTR1P27810 393 aaKnown RBP5.64□□□□□ -1.51
SSF1YHR066W TPD3P31383 635 aa5.64□□□□□ -1.51
SSF1YHR066W GUA1P38625 525 aaKnown RBP5.64□□□□□ -1.51
SSF1YHR066W YIR007WP40566 764 aa5.64□□□□□ -1.51
SSF1YHR066W HPF1Q05164 967 aa5.64□□□□□ -1.51
SSF1YHR066W SCJ1P25303 377 aa5.63□□□□□ -1.51
SSF1YHR066W RTF1P53064 558 aa5.63□□□□□ -1.51
SSF1YHR066W HST2P53686 357 aa5.63□□□□□ -1.51
SSF1YHR066W YMR196WQ04336 1088 aa5.63□□□□□ -1.51
SSF1YHR066W TYW1Q08960 810 aaKnown RBP5.63□□□□□ -1.51
SSF1YHR066W UGA3P26370 528 aa5.62□□□□□ -1.51
SSF1YHR066W CSN12P47130 423 aa5.62□□□□□ -1.51
SSF1YHR066W YLR346CQ06139 101 aa5.62□□□□□ -1.51
SSF1YHR066W GLY1P37303 387 aaKnown RBP5.61□□□□□ -1.51
SSF1YHR066W YNL115CP53925 644 aa5.61□□□□□ -1.51
SSF1YHR066W SYH1Q02875 849 aaKnown RBP5.61□□□□□ -1.51
SSF1YHR066W GLN1P32288 370 aaKnown RBP5.6□□□□□ -1.51
SSF1YHR066W HXT10P43581 546 aa5.6□□□□□ -1.51
SSF1YHR066W KXD1P53158 218 aa5.6□□□□□ -1.51
SSF1YHR066W MMP1Q12372 583 aa5.6□□□□□ -1.51
SSF1YHR066W ESS1P22696 170 aa5.59□□□□□ -1.51
SSF1YHR066W SLY41P22215 453 aa5.58□□□□□ -1.52
SSF1YHR066W TY1A-BLQ12266 440 aa5.58□□□□□ -1.52
SSF1YHR066W SRF1Q12516 437 aa5.58□□□□□ -1.52
SSF1YHR066W PDC1P06169 563 aaKnown RBP5.56□□□□□ -1.52
SSF1YHR066W YJU3P28321 313 aa5.56□□□□□ -1.52
Retrieved 100 of 5,963 RNA–protein pairs in 8.6 ms