RNA–Protein interactions for RNA: YHR066W

SSF1, Transcript of Constituent of 66S pre-ribosomal particles, yeastyeast

Gene SSF1, Length 1,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSF1YHR066W MTC1P47018 478 aaKnown RBP12.39□□□□□ -0.43
SSF1YHR066W FAP1P53971 965 aa12.23□□□□□ -0.45
SSF1YHR066W PRY3P47033 881 aa11.54□□□□□ -0.56
SSF1YHR066W AAD16Q02895 342 aa11.04□□□□□ -0.64
SSF1YHR066W PRI1P10363 409 aa11.01□□□□□ -0.65
SSF1YHR066W YCK3P39962 524 aa10.97□□□□□ -0.65
SSF1YHR066W HAA1Q12753 694 aaKnown RBP10.77□□□□□ -0.69
SSF1YHR066W DRS1P32892 752 aaKnown RBP10.54□□□□□ -0.72
SSF1YHR066W ISW2Q08773 1120 aa10.44□□□□□ -0.74
SSF1YHR066W RPG1P38249 964 aaKnown RBP10.39□□□□□ -0.75
SSF1YHR066W TSR3Q12094 313 aaKnown RBP10.34□□□□□ -0.75
SSF1YHR066W MRPL32P25348 183 aa9.91□□□□□ -0.82
SSF1YHR066W YGL015CP33199 130 aa9.78□□□□□ -0.84
SSF1YHR066W DIP2Q12220 943 aaPredicted RBP9.61□□□□□ -0.87
SSF1YHR066W RSE1Q04693 1361 aaKnown RBP9.56□□□□□ -0.88
SSF1YHR066W BUD31P25337 157 aaPredicted RBP9.43□□□□□ -0.9
SSF1YHR066W REB1P21538 810 aa9.36□□□□□ -0.91
SSF1YHR066W RPL17AP05740 184 aaKnown RBP9.34□□□□□ -0.91
SSF1YHR066W RPL17BP46990 184 aaKnown RBP9.34□□□□□ -0.91
SSF1YHR066W CDC27P38042 758 aa9.29□□□□□ -0.92
SSF1YHR066W UBP10P53874 792 aaPredicted RBP9.12□□□□□ -0.95
SSF1YHR066W MAP2P38174 421 aaKnown RBP9.11□□□□□ -0.95
SSF1YHR066W YKR023WP36119 530 aaKnown RBP9.02□□□□□ -0.97
SSF1YHR066W AVT3P36062 692 aa9.01□□□□□ -0.97
SSF1YHR066W SPT21P35209 758 aa8.9□□□□□ -0.98
SSF1YHR066W SIS1P25294 352 aaKnown RBP8.85□□□□□ -0.99
SSF1YHR066W DCD1P06773 312 aa8.83□□□□□ -1
SSF1YHR066W TFC8Q12308 588 aa8.83□□□□□ -1
SSF1YHR066W HOP09932 586 aa8.82□□□□□ -1
SSF1YHR066W TIF4632P39936 914 aaKnown RBP8.73□□□□□ -1.01
SSF1YHR066W UBP9P39967 754 aa8.73□□□□□ -1.01
SSF1YHR066W TGL3P40308 642 aa8.73□□□□□ -1.01
SSF1YHR066W SCY1P53009 804 aa8.73□□□□□ -1.01
SSF1YHR066W BFR2Q06631 534 aaKnown RBP8.7□□□□□ -1.02
SSF1YHR066W SLX5P32828 619 aaKnown RBP8.66□□□□□ -1.02
SSF1YHR066W BCH2P36122 765 aa8.49□□□□□ -1.05
SSF1YHR066W RIM101P33400 625 aa8.35□□□□□ -1.07
SSF1YHR066W YBL029C-AQ3E756 94 aa8.29□□□□□ -1.08
SSF1YHR066W MST1P07236 462 aa8.27□□□□□ -1.09
SSF1YHR066W EPS1P40557 701 aa8.22□□□□□ -1.09
SSF1YHR066W BDF1P35817 686 aa8.21□□□□□ -1.1
SSF1YHR066W YOR238WQ08634 303 aa8.16□□□□□ -1.1
SSF1YHR066W VNX1P42839 908 aa8.15□□□□□ -1.1
SSF1YHR066W NSR1P27476 414 aaKnown RBP RIP-Chip data8.07□□□□□ -1.12not detected
SSF1YHR066W TFA1P36100 482 aa8.06□□□□□ -1.12
SSF1YHR066W OXP1P28273 1286 aa8.05□□□□□ -1.12
SSF1YHR066W SPP1Q03012 353 aa8.05□□□□□ -1.12
SSF1YHR066W AIR2Q12476 344 aaKnown RBP8.03□□□□□ -1.12
SSF1YHR066W WSC3Q12215 556 aa7.98□□□□□ -1.13
SSF1YHR066W FKH1P40466 484 aa7.97□□□□□ -1.13
SSF1YHR066W YAP5P40574 245 aa7.96□□□□□ -1.14
SSF1YHR066W YJL171CP46992 396 aa7.93□□□□□ -1.14
SSF1YHR066W TIF11P38912 153 aaKnown RBP7.92□□□□□ -1.14
SSF1YHR066W PTP3P40048 928 aa7.92□□□□□ -1.14
SSF1YHR066W YIL055CP40523 627 aaKnown RBP7.86□□□□□ -1.15
SSF1YHR066W BBC1P47068 1157 aa7.84□□□□□ -1.15
SSF1YHR066W LDB19Q12502 818 aa7.82□□□□□ -1.16
SSF1YHR066W AI2P03876 854 aa7.8□□□□□ -1.16
SSF1YHR066W GTT3P39996 337 aa7.8□□□□□ -1.16
SSF1YHR066W RSM7P47150 247 aa7.79□□□□□ -1.16
SSF1YHR066W IOC2Q12072 812 aa7.78□□□□□ -1.16
SSF1YHR066W BMT6Q12291 365 aa7.78□□□□□ -1.16
SSF1YHR066W ULI1P43604 169 aa7.75□□□□□ -1.17
SSF1YHR066W PIB1Q06651 286 aa7.67□□□□□ -1.18
SSF1YHR066W YAH1Q12184 172 aaKnown RBP7.64□□□□□ -1.19
SSF1YHR066W MSB4Q12317 492 aa7.59□□□□□ -1.19
SSF1YHR066W RTG1P32607 177 aa7.58□□□□□ -1.2
SSF1YHR066W EAP1P36041 632 aaKnown RBP7.57□□□□□ -1.2
SSF1YHR066W TRP5P00931 707 aaKnown RBP7.53□□□□□ -1.2
SSF1YHR066W NCR1Q12200 1170 aa7.53□□□□□ -1.2
SSF1YHR066W YOL036WQ08206 761 aa7.52□□□□□ -1.21
SSF1YHR066W SET4P42948 560 aa7.51□□□□□ -1.21
SSF1YHR066W PSD2P53037 1138 aaKnown RBP7.5□□□□□ -1.21
SSF1YHR066W YLR271WQ06152 274 aa7.49□□□□□ -1.21
SSF1YHR066W MRM1P25270 412 aa7.47□□□□□ -1.21
SSF1YHR066W YNL035CP53962 389 aaKnown RBP7.47□□□□□ -1.21
SSF1YHR066W SEC61P32915 480 aa7.46□□□□□ -1.21
SSF1YHR066W BCK2P33306 851 aa7.38□□□□□ -1.23
SSF1YHR066W DBP1P24784 617 aaKnown RBP7.36□□□□□ -1.23
SSF1YHR066W YMR1P47147 688 aaKnown RBP RIP-Chip data7.36□□□□□ -1.23not detected
SSF1YHR066W VMA1P17255 1071 aaKnown RBP7.35□□□□□ -1.23
SSF1YHR066W VPS29P38759 282 aa7.35□□□□□ -1.23
SSF1YHR066W SAP30P38429 201 aa7.34□□□□□ -1.23
SSF1YHR066W SAM3Q08986 587 aa7.34□□□□□ -1.23
SSF1YHR066W YFR006WP43590 535 aa7.33□□□□□ -1.24
SSF1YHR066W TFG1P41895 735 aaPredicted RBP7.33□□□□□ -1.24
SSF1YHR066W DAN4P47179 1161 aa7.33□□□□□ -1.24
SSF1YHR066W CHL1P22516 861 aaPredicted RBP7.3□□□□□ -1.24
SSF1YHR066W STS1P38637 319 aa7.3□□□□□ -1.24
SSF1YHR066W YDL129WQ07555 291 aa7.27□□□□□ -1.25
SSF1YHR066W PRE3P38624 215 aa7.26□□□□□ -1.25
SSF1YHR066W JIP4Q03361 876 aa7.26□□□□□ -1.25
SSF1YHR066W RTG3P38165 486 aa7.23□□□□□ -1.25
SSF1YHR066W ABP1P15891 592 aaKnown RBP7.19□□□□□ -1.26
SSF1YHR066W CST9Q06032 482 aa7.19□□□□□ -1.26
SSF1YHR066W GYP5Q12344 894 aa7.18□□□□□ -1.26
SSF1YHR066W HTA1P04911 132 aaKnown RBP7.16□□□□□ -1.26
SSF1YHR066W HTA2P04912 132 aa7.16□□□□□ -1.26
SSF1YHR066W XDJ1P39102 459 aa7.16□□□□□ -1.26
SSF1YHR066W DCW1P36091 449 aa7.14□□□□□ -1.27
Retrieved 100 of 5,963 RNA–protein pairs in 16.8 ms