RNA–Protein interactions for RNA: YGL248W

PDE1, Transcript of Low-affinity cyclic AMP phosphodiesterase, yeastyeast

Gene PDE1, Length 1,110 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PDE1YGL248W TY1A-PR1P0CX58 440 aa7.64□□□□□ -1.19
PDE1YGL248W TY1A-ORP0CX59 440 aa7.64□□□□□ -1.19
PDE1YGL248W TY1A-PR2P0CX60 440 aa7.64□□□□□ -1.19
PDE1YGL248W TY1A-DR5P0CX65 440 aa7.64□□□□□ -1.19
PDE1YGL248W TY1A-ER2P0CX66 440 aa7.64□□□□□ -1.19
PDE1YGL248W TY1A-GR3P0CX67 440 aa7.64□□□□□ -1.19
PDE1YGL248W TY1A-LR1P0CX68 440 aa7.64□□□□□ -1.19
PDE1YGL248W TY1A-MR2P0CX69 440 aa7.64□□□□□ -1.19
PDE1YGL248W RGR1P19263 1082 aa7.64□□□□□ -1.19
PDE1YGL248W TY1A-JR2P47099 440 aa7.64□□□□□ -1.19
PDE1YGL248W TY1A-DR1Q03856 440 aa7.64□□□□□ -1.19
PDE1YGL248W TY1A-ML1Q04706 440 aaKnown RBP7.64□□□□□ -1.19
PDE1YGL248W YPR109WQ06104 294 aa7.64□□□□□ -1.19
PDE1YGL248W TY1A-BRQ12217 440 aa7.64□□□□□ -1.19
PDE1YGL248W TY1A-NL2Q12470 440 aa7.64□□□□□ -1.19
PDE1YGL248W TY1A-GR2Q12485 440 aa7.64□□□□□ -1.19
PDE1YGL248W SPT16P32558 1035 aaKnown RBP7.63□□□□□ -1.19
PDE1YGL248W CKB1P43639 278 aa7.63□□□□□ -1.19
PDE1YGL248W SEC2P17065 759 aa7.62□□□□□ -1.19
PDE1YGL248W RPN1P38764 993 aaKnown RBP7.62□□□□□ -1.19
PDE1YGL248W PBS2P08018 668 aa7.61□□□□□ -1.19
PDE1YGL248W CST6P40535 587 aa7.6□□□□□ -1.19
PDE1YGL248W YRB30P53107 440 aaPredicted RBP7.6□□□□□ -1.19
PDE1YGL248W RRN7P40992 514 aa7.57□□□□□ -1.2
PDE1YGL248W PAT1P25644 796 aaKnown RBP7.56□□□□□ -1.2
PDE1YGL248W LAM6Q08001 693 aa7.56□□□□□ -1.2
PDE1YGL248W PSE1P32337 1089 aaKnown RBP7.54□□□□□ -1.2
PDE1YGL248W RGA1P39083 1007 aa7.54□□□□□ -1.2
PDE1YGL248W AIR1P40507 360 aaKnown RBP7.54□□□□□ -1.2
PDE1YGL248W FRK1Q03002 865 aaPredicted RBP7.54□□□□□ -1.2
PDE1YGL248W KEX2P13134 814 aa7.53□□□□□ -1.2
PDE1YGL248W CLA4P48562 842 aa7.53□□□□□ -1.2
PDE1YGL248W ORC1P54784 914 aaPredicted RBP7.53□□□□□ -1.2
PDE1YGL248W MAM3Q12296 706 aa7.53□□□□□ -1.2
PDE1YGL248W ERF2Q06551 359 aa7.51□□□□□ -1.21
PDE1YGL248W BRE2P43132 505 aa7.5□□□□□ -1.21
PDE1YGL248W BDP1P46678 594 aa7.5□□□□□ -1.21
PDE1YGL248W CLB5P30283 435 aa7.49□□□□□ -1.21
PDE1YGL248W DSF2P38213 736 aa7.47□□□□□ -1.21
PDE1YGL248W IES2P40154 320 aa7.47□□□□□ -1.21
PDE1YGL248W GCR2Q01722 534 aa7.47□□□□□ -1.21
PDE1YGL248W TOP1P04786 769 aa7.46□□□□□ -1.22
PDE1YGL248W CDC4P07834 779 aa7.46□□□□□ -1.22
PDE1YGL248W RGA2Q06407 1009 aa7.45□□□□□ -1.22
PDE1YGL248W PAC1P39946 494 aaKnown RBP7.43□□□□□ -1.22
PDE1YGL248W HED1Q03937 162 aa7.43□□□□□ -1.22
PDE1YGL248W RTF1P53064 558 aa7.42□□□□□ -1.22
PDE1YGL248W TUB4P53378 473 aa7.41□□□□□ -1.22
PDE1YGL248W AGE1Q04412 482 aa7.41□□□□□ -1.22
PDE1YGL248W TEA1P47988 759 aa7.39□□□□□ -1.23
PDE1YGL248W NUP42P49686 430 aaKnown RBP7.39□□□□□ -1.23
PDE1YGL248W YNL115CP53925 644 aa7.39□□□□□ -1.23
PDE1YGL248W MOD5P07884 428 aa7.38□□□□□ -1.23
PDE1YGL248W SPB4P25808 606 aaPredicted RBP7.38□□□□□ -1.23
PDE1YGL248W GAR1P28007 205 aaKnown RBP7.37□□□□□ -1.23
PDE1YGL248W SNU71P53207 620 aaKnown RBP7.37□□□□□ -1.23
PDE1YGL248W SIT4P20604 311 aa7.36□□□□□ -1.23
PDE1YGL248W YPL062WQ02781 134 aa7.36□□□□□ -1.23
PDE1YGL248W GBP2P25555 427 aaKnown RBP RIP-Chip data7.34□□□□□ -1.23not detected
PDE1YGL248W NIS1P53939 407 aa7.34□□□□□ -1.23
PDE1YGL248W YML020WQ03722 664 aa7.34□□□□□ -1.23
PDE1YGL248W PUS5Q06244 254 aa7.34□□□□□ -1.23
PDE1YGL248W DIT2P21595 489 aa7.33□□□□□ -1.24
PDE1YGL248W MET32Q12041 191 aa7.32□□□□□ -1.24
PDE1YGL248W KXD1P53158 218 aa7.31□□□□□ -1.24
PDE1YGL248W ASH1P34233 588 aa7.3□□□□□ -1.24
PDE1YGL248W AFT1P22149 690 aa7.29□□□□□ -1.24
PDE1YGL248W NOP7P53261 605 aaKnown RBP7.29□□□□□ -1.24
PDE1YGL248W HST3P53687 447 aa7.29□□□□□ -1.24
PDE1YGL248W YMR196WQ04336 1088 aa7.29□□□□□ -1.24
PDE1YGL248W MET22P32179 357 aa7.28□□□□□ -1.24
PDE1YGL248W FPK1P53739 893 aa7.28□□□□□ -1.24
PDE1YGL248W NOP8Q08287 484 aaPredicted RBP7.28□□□□□ -1.24
PDE1YGL248W SLY41P22215 453 aa7.27□□□□□ -1.25
PDE1YGL248W HGH1P48362 394 aaKnown RBP7.27□□□□□ -1.25
PDE1YGL248W ENV9Q08651 330 aa7.27□□□□□ -1.25
PDE1YGL248W BRL1P38770 471 aa7.26□□□□□ -1.25
PDE1YGL248W RRD1P40454 393 aaKnown RBP7.26□□□□□ -1.25
PDE1YGL248W HXT10P43581 546 aa7.26□□□□□ -1.25
PDE1YGL248W TPD3P31383 635 aa7.25□□□□□ -1.25
PDE1YGL248W PDC1P06169 563 aaKnown RBP7.24□□□□□ -1.25
PDE1YGL248W YDR444WQ04093 687 aa7.24□□□□□ -1.25
PDE1YGL248W SLX8P40072 274 aa7.22□□□□□ -1.25
PDE1YGL248W TBF1Q02457 562 aa7.22□□□□□ -1.25
PDE1YGL248W SYH1Q02875 849 aaKnown RBP7.22□□□□□ -1.25
PDE1YGL248W PUS6P53294 404 aa7.2□□□□□ -1.26
PDE1YGL248W ALR1Q08269 859 aa7.2□□□□□ -1.26
PDE1YGL248W YJR115WP47152 169 aa7.19□□□□□ -1.26
PDE1YGL248W RPA14P50106 137 aa7.19□□□□□ -1.26
PDE1YGL248W LCB5Q06147 687 aaKnown RBP7.19□□□□□ -1.26
PDE1YGL248W YDL206WQ12424 762 aa7.19□□□□□ -1.26
PDE1YGL248W SCJ1P25303 377 aa7.18□□□□□ -1.26
PDE1YGL248W ATF2P53296 535 aa7.18□□□□□ -1.26
PDE1YGL248W HST2P53686 357 aa7.18□□□□□ -1.26
PDE1YGL248W YPR097WQ06839 1073 aa7.17□□□□□ -1.26
PDE1YGL248W TRM1P15565 570 aaKnown RBP7.16□□□□□ -1.26
PDE1YGL248W KIP2P28743 706 aa7.16□□□□□ -1.26
PDE1YGL248W MSB3P48566 633 aaPredicted RBP7.16□□□□□ -1.26
PDE1YGL248W MMP1Q12372 583 aa7.15□□□□□ -1.26
PDE1YGL248W BUB1P41695 1021 aaKnown RBP RIP-Chip data7.14□□□□□ -1.27not detected
Retrieved 100 of 5,963 RNA–protein pairs in 8.4 ms