RNA–Protein interactions for RNA: YGL238W

CSE1, Transcript of Nuclear envelope protein that mediates the nuclear export of Srp1p, yeastyeast

Gene CSE1, Length 2,883 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CSE1YGL238W TY1A-ER2P0CX66 440 aa2.09□□□□□ -2.08
CSE1YGL238W TY1A-GR3P0CX67 440 aa2.09□□□□□ -2.08
CSE1YGL238W TY1A-LR1P0CX68 440 aa2.09□□□□□ -2.08
CSE1YGL238W TY1A-MR2P0CX69 440 aa2.09□□□□□ -2.08
CSE1YGL238W TY1A-JR2P47099 440 aa2.09□□□□□ -2.08
CSE1YGL238W TY1A-DR1Q03856 440 aa2.09□□□□□ -2.08
CSE1YGL238W TY1A-ML1Q04706 440 aaKnown RBP2.09□□□□□ -2.08
CSE1YGL238W TY1A-BRQ12217 440 aa2.09□□□□□ -2.08
CSE1YGL238W TY1A-NL2Q12470 440 aa2.09□□□□□ -2.08
CSE1YGL238W TY1A-GR2Q12485 440 aa2.09□□□□□ -2.08
CSE1YGL238W FRK1Q03002 865 aaPredicted RBP2.08□□□□□ -2.08
CSE1YGL238W HED1Q03937 162 aa2.08□□□□□ -2.08
CSE1YGL238W IFH1P39520 1085 aa2.08□□□□□ -2.08
CSE1YGL238W BDP1P46678 594 aa2.08□□□□□ -2.08
CSE1YGL238W YDR444WQ04093 687 aa2.08□□□□□ -2.08
CSE1YGL238W PAT1P25644 796 aaKnown RBP2.07□□□□□ -2.08
CSE1YGL238W ORC6P38826 435 aa2.07□□□□□ -2.08
CSE1YGL238W RRN7P40992 514 aa2.06□□□□□ -2.08
CSE1YGL238W YDL176WQ12027 708 aa2.06□□□□□ -2.08
CSE1YGL238W MVP1P40959 511 aaKnown RBP2.06□□□□□ -2.08
CSE1YGL238W LCB5Q06147 687 aaKnown RBP2.06□□□□□ -2.08
CSE1YGL238W ASH1P34233 588 aa2.05□□□□□ -2.08
CSE1YGL238W REF2P42073 533 aaPredicted RBP2.05□□□□□ -2.08
CSE1YGL238W AFT1P22149 690 aa2.04□□□□□ -2.08
CSE1YGL238W YPR109WQ06104 294 aa2.04□□□□□ -2.08
CSE1YGL238W MET32Q12041 191 aa2.04□□□□□ -2.08
CSE1YGL238W MOD5P07884 428 aa2.04□□□□□ -2.08
CSE1YGL238W RGR1P19263 1082 aa2.04□□□□□ -2.08
CSE1YGL238W RRD1P40454 393 aaKnown RBP2.04□□□□□ -2.08
CSE1YGL238W HST3P53687 447 aa2.04□□□□□ -2.08
CSE1YGL238W MTC5Q03897 1148 aa2.03□□□□□ -2.08
CSE1YGL238W COX6P00427 148 aa2.03□□□□□ -2.08
CSE1YGL238W YPR148CQ06523 435 aa2.02□□□□□ -2.09
CSE1YGL238W ERF2Q06551 359 aa2.02□□□□□ -2.09
CSE1YGL238W MAK21Q12176 1025 aaKnown RBP2.02□□□□□ -2.09
CSE1YGL238W KEX2P13134 814 aa2.01□□□□□ -2.09
CSE1YGL238W YJR115WP47152 169 aa2.01□□□□□ -2.09
CSE1YGL238W PAC1P39946 494 aaKnown RBP2.01□□□□□ -2.09
CSE1YGL238W ACO2P39533 789 aa2□□□□□ -2.09
CSE1YGL238W PUS5Q06244 254 aa2□□□□□ -2.09
CSE1YGL238W AGE1Q04412 482 aa2□□□□□ -2.09
CSE1YGL238W TUB4P53378 473 aa1.99□□□□□ -2.09
CSE1YGL238W TRK2P28584 889 aa1.99□□□□□ -2.09
CSE1YGL238W MSB3P48566 633 aaPredicted RBP1.99□□□□□ -2.09
CSE1YGL238W CAF120P53836 1060 aa1.99□□□□□ -2.09
CSE1YGL238W TPD3P31383 635 aa1.97□□□□□ -2.09
CSE1YGL238W VPS70P47161 811 aa1.97□□□□□ -2.09
CSE1YGL238W RTF1P53064 558 aa1.97□□□□□ -2.09
CSE1YGL238W YLR346CQ06139 101 aa1.97□□□□□ -2.09
CSE1YGL238W PSE1P32337 1089 aaKnown RBP1.97□□□□□ -2.09
CSE1YGL238W OPT2Q06593 877 aa1.97□□□□□ -2.09
CSE1YGL238W YNL115CP53925 644 aa1.96□□□□□ -2.09
CSE1YGL238W CLB5P30283 435 aa1.96□□□□□ -2.1
CSE1YGL238W KXD1P53158 218 aa1.96□□□□□ -2.1
CSE1YGL238W YGR035CP53222 116 aa1.96□□□□□ -2.1
CSE1YGL238W SYH1Q02875 849 aaKnown RBP1.96□□□□□ -2.1
CSE1YGL238W UGA3P26370 528 aa1.96□□□□□ -2.1
CSE1YGL238W GLY1P37303 387 aaKnown RBP1.96□□□□□ -2.1
CSE1YGL238W HXT10P43581 546 aa1.96□□□□□ -2.1
CSE1YGL238W PTK2P47116 818 aaKnown RBP1.96□□□□□ -2.1
CSE1YGL238W SIT4P20604 311 aa1.95□□□□□ -2.1
CSE1YGL238W NUP85P46673 744 aa1.95□□□□□ -2.1
CSE1YGL238W HPF1Q05164 967 aa1.95□□□□□ -2.1
CSE1YGL238W YIR007WP40566 764 aa1.94□□□□□ -2.1
CSE1YGL238W SRF1Q12516 437 aa1.94□□□□□ -2.1
CSE1YGL238W ICP55P40051 511 aa1.94□□□□□ -2.1
CSE1YGL238W RTT106P40161 455 aa1.94□□□□□ -2.1
CSE1YGL238W PDC1P06169 563 aaKnown RBP1.93□□□□□ -2.1
CSE1YGL238W SCW11P53189 542 aa1.93□□□□□ -2.1
CSE1YGL238W TY1A-BLQ12266 440 aa1.93□□□□□ -2.1
CSE1YGL238W MRT4P33201 236 aaKnown RBP1.93□□□□□ -2.1
CSE1YGL238W MIP1P15801 1254 aa1.92□□□□□ -2.1
CSE1YGL238W TYW1Q08960 810 aaKnown RBP1.92□□□□□ -2.1
CSE1YGL238W PBS2P08018 668 aa1.92□□□□□ -2.1
CSE1YGL238W KIP2P28743 706 aa1.92□□□□□ -2.1
CSE1YGL238W YPR204WQ08995 1032 aa1.92□□□□□ -2.1
CSE1YGL238W IXR1P33417 597 aa1.91□□□□□ -2.1
CSE1YGL238W CKB1P43639 278 aa1.91□□□□□ -2.1
CSE1YGL238W TEA1P47988 759 aa1.91□□□□□ -2.1
CSE1YGL238W YPR097WQ06839 1073 aa1.91□□□□□ -2.1
CSE1YGL238W LSB3P43603 459 aaKnown RBP1.91□□□□□ -2.1
CSE1YGL238W RPA14P50106 137 aa1.91□□□□□ -2.1
CSE1YGL238W NIS1P53939 407 aa1.91□□□□□ -2.1
CSE1YGL238W UBP2Q01476 1272 aa1.91□□□□□ -2.1
CSE1YGL238W ALR1Q08269 859 aa1.91□□□□□ -2.1
CSE1YGL238W PUS1Q12211 544 aaKnown RBP1.91□□□□□ -2.1
CSE1YGL238W DPH6Q12429 685 aa1.9□□□□□ -2.1
CSE1YGL238W SLY41P22215 453 aa1.9□□□□□ -2.11
CSE1YGL238W PUS6P53294 404 aa1.9□□□□□ -2.11
CSE1YGL238W LSC2P53312 427 aa1.9□□□□□ -2.11
CSE1YGL238W ARG82P07250 355 aa1.89□□□□□ -2.11
CSE1YGL238W PHM7Q12252 991 aa1.89□□□□□ -2.11
CSE1YGL238W MAM3Q12296 706 aa1.89□□□□□ -2.11
CSE1YGL238W BUB1P41695 1021 aaKnown RBP RIP-Chip data1.88□□□□□ -2.11not detected
CSE1YGL238W AAD14P42884 376 aa1.88□□□□□ -2.11
CSE1YGL238W FPK1P53739 893 aa1.88□□□□□ -2.11
CSE1YGL238W YDL206WQ12424 762 aa1.88□□□□□ -2.11
CSE1YGL238W OSH7P38755 437 aa1.88□□□□□ -2.11
CSE1YGL238W ROG3P43602 733 aa1.88□□□□□ -2.11
CSE1YGL238W YJR098CP47139 656 aa1.88□□□□□ -2.11
Retrieved 100 of 5,963 RNA–protein pairs in 16.6 ms