RNA–Protein interactions for RNA: YFR027W

ECO1, Transcript of Acetyltransferase, yeast

Gene ECO1, Length 846 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ECO1	YFR027W	TY1A-ER2	P0CX66	440 aa		5.84	□□□□□ -1.47
ECO1	YFR027W	TY1A-GR3	P0CX67	440 aa		5.84	□□□□□ -1.47
ECO1	YFR027W	TY1A-LR1	P0CX68	440 aa		5.84	□□□□□ -1.47
ECO1	YFR027W	TY1A-MR2	P0CX69	440 aa		5.84	□□□□□ -1.47
ECO1	YFR027W	TY1A-JR2	P47099	440 aa		5.84	□□□□□ -1.47
ECO1	YFR027W	TY1A-DR1	Q03856	440 aa		5.84	□□□□□ -1.47
ECO1	YFR027W	TY1A-ML1	Q04706	440 aa	Known RBP	5.84	□□□□□ -1.47
ECO1	YFR027W	CSC1	Q06538	782 aa		5.84	□□□□□ -1.47
ECO1	YFR027W	LAM6	Q08001	693 aa		5.84	□□□□□ -1.47
ECO1	YFR027W	TUM1	Q08686	304 aa	Known RBP	5.84	□□□□□ -1.47
ECO1	YFR027W	TY1A-BR	Q12217	440 aa		5.84	□□□□□ -1.47
ECO1	YFR027W	TY1A-NL2	Q12470	440 aa		5.84	□□□□□ -1.47
ECO1	YFR027W	TY1A-GR2	Q12485	440 aa		5.84	□□□□□ -1.47
ECO1	YFR027W	MAM3	Q12296	706 aa		5.83	□□□□□ -1.48
ECO1	YFR027W	LEU3	P08638	886 aa		5.82	□□□□□ -1.48
ECO1	YFR027W	SEC2	P17065	759 aa		5.82	□□□□□ -1.48
ECO1	YFR027W	GAR1	P28007	205 aa	Known RBP	5.81	□□□□□ -1.48
ECO1	YFR027W	ORC6	P38826	435 aa		5.81	□□□□□ -1.48
ECO1	YFR027W	GCR2	Q01722	534 aa		5.8	□□□□□ -1.48
ECO1	YFR027W	IES2	P40154	320 aa		5.78	□□□□□ -1.48
ECO1	YFR027W	CDC4	P07834	779 aa		5.77	□□□□□ -1.49
ECO1	YFR027W	GCD11	P32481	527 aa	Known RBP	5.77	□□□□□ -1.49
ECO1	YFR027W	NPL4	P33755	580 aa		5.77	□□□□□ -1.49
ECO1	YFR027W	NUP42	P49686	430 aa	Known RBP	5.77	□□□□□ -1.49
ECO1	YFR027W	FRK1	Q03002	865 aa	Predicted RBP	5.77	□□□□□ -1.49
ECO1	YFR027W	SPT16	P32558	1035 aa	Known RBP	5.76	□□□□□ -1.49
ECO1	YFR027W	BDP1	P46678	594 aa		5.75	□□□□□ -1.49
ECO1	YFR027W	GBP2	P25555	427 aa	Known RBP RIP-Chip data	5.74	□□□□□ -1.49	not detected
ECO1	YFR027W	MET22	P32179	357 aa		5.74	□□□□□ -1.49
ECO1	YFR027W	PSE1	P32337	1089 aa	Known RBP	5.74	□□□□□ -1.49
ECO1	YFR027W	MVP1	P40959	511 aa	Known RBP	5.73	□□□□□ -1.49
ECO1	YFR027W	RRN7	P40992	514 aa		5.73	□□□□□ -1.49
ECO1	YFR027W	DIT2	P21595	489 aa		5.72	□□□□□ -1.49
ECO1	YFR027W	YNR021W	P53723	404 aa	Known RBP	5.72	□□□□□ -1.49
ECO1	YFR027W	ENV9	Q08651	330 aa		5.72	□□□□□ -1.49
ECO1	YFR027W	RGR1	P19263	1082 aa		5.71	□□□□□ -1.5
ECO1	YFR027W	HED1	Q03937	162 aa		5.7	□□□□□ -1.5
ECO1	YFR027W	YPR109W	Q06104	294 aa		5.68	□□□□□ -1.5
ECO1	YFR027W	ERF2	Q06551	359 aa		5.67	□□□□□ -1.5
ECO1	YFR027W	CLB5	P30283	435 aa		5.66	□□□□□ -1.5
ECO1	YFR027W	RPN1	P38764	993 aa	Known RBP	5.66	□□□□□ -1.5
ECO1	YFR027W	YDR444W	Q04093	687 aa		5.65	□□□□□ -1.5
ECO1	YFR027W	YDL176W	Q12027	708 aa		5.65	□□□□□ -1.5
ECO1	YFR027W	MET32	Q12041	191 aa		5.65	□□□□□ -1.5
ECO1	YFR027W	AIM7	Q12156	149 aa		5.65	□□□□□ -1.5
ECO1	YFR027W	MOD5	P07884	428 aa		5.64	□□□□□ -1.51
ECO1	YFR027W	KEX2	P13134	814 aa		5.64	□□□□□ -1.51
ECO1	YFR027W	PAT1	P25644	796 aa	Known RBP	5.64	□□□□□ -1.51
ECO1	YFR027W	GLC3	P32775	704 aa		5.64	□□□□□ -1.51
ECO1	YFR027W	PAC1	P39946	494 aa	Known RBP	5.63	□□□□□ -1.51
ECO1	YFR027W	ASH1	P34233	588 aa		5.62	□□□□□ -1.51
ECO1	YFR027W	ATF2	P53296	535 aa		5.62	□□□□□ -1.51
ECO1	YFR027W	LCB5	Q06147	687 aa	Known RBP	5.62	□□□□□ -1.51
ECO1	YFR027W	TEA1	P47988	759 aa		5.61	□□□□□ -1.51
ECO1	YFR027W	AFT1	P22149	690 aa		5.6	□□□□□ -1.51
ECO1	YFR027W	LEO1	P38439	464 aa		5.6	□□□□□ -1.51
ECO1	YFR027W	AGE1	Q04412	482 aa		5.6	□□□□□ -1.51
ECO1	YFR027W	SIT4	P20604	311 aa		5.57	□□□□□ -1.52
ECO1	YFR027W	PUS5	Q06244	254 aa		5.57	□□□□□ -1.52
ECO1	YFR027W	KIN1	P13185	1064 aa		5.56	□□□□□ -1.52
ECO1	YFR027W	RRD1	P40454	393 aa	Known RBP	5.56	□□□□□ -1.52
ECO1	YFR027W	NIS1	P53939	407 aa		5.56	□□□□□ -1.52
ECO1	YFR027W	RTF1	P53064	558 aa		5.55	□□□□□ -1.52
ECO1	YFR027W	TUB4	P53378	473 aa		5.55	□□□□□ -1.52
ECO1	YFR027W	HST3	P53687	447 aa		5.54	□□□□□ -1.52
ECO1	YFR027W	YJR115W	P47152	169 aa		5.53	□□□□□ -1.52
ECO1	YFR027W	FPK1	P53739	893 aa		5.53	□□□□□ -1.52
ECO1	YFR027W	HST2	P53686	357 aa		5.52	□□□□□ -1.53
ECO1	YFR027W	YNL115C	P53925	644 aa		5.51	□□□□□ -1.53
ECO1	YFR027W	YMR196W	Q04336	1088 aa		5.51	□□□□□ -1.53
ECO1	YFR027W	KTR1	P27810	393 aa	Known RBP	5.47	□□□□□ -1.53
ECO1	YFR027W	GLN1	P32288	370 aa	Known RBP	5.47	□□□□□ -1.53
ECO1	YFR027W	CSN12	P47130	423 aa		5.47	□□□□□ -1.53
ECO1	YFR027W	TPD3	P31383	635 aa		5.46	□□□□□ -1.54
ECO1	YFR027W	MSB3	P48566	633 aa	Predicted RBP	5.46	□□□□□ -1.54
ECO1	YFR027W	MMP1	Q12372	583 aa		5.46	□□□□□ -1.54
ECO1	YFR027W	SSA2	P10592	639 aa	Known RBP	5.45	□□□□□ -1.54
ECO1	YFR027W	SLY41	P22215	453 aa		5.45	□□□□□ -1.54
ECO1	YFR027W	GUA1	P38625	525 aa	Known RBP	5.45	□□□□□ -1.54
ECO1	YFR027W	ACO2	P39533	789 aa		5.45	□□□□□ -1.54
ECO1	YFR027W	SCJ1	P25303	377 aa		5.44	□□□□□ -1.54
ECO1	YFR027W	CAF120	P53836	1060 aa		5.44	□□□□□ -1.54
ECO1	YFR027W	HPC2	Q01448	625 aa		5.44	□□□□□ -1.54
ECO1	YFR027W	TYW1	Q08960	810 aa	Known RBP	5.44	□□□□□ -1.54
ECO1	YFR027W	ESS1	P22696	170 aa		5.43	□□□□□ -1.54
ECO1	YFR027W	BUB1	P41695	1021 aa	Known RBP RIP-Chip data	5.42	□□□□□ -1.54	not detected
ECO1	YFR027W	HXT10	P43581	546 aa		5.42	□□□□□ -1.54
ECO1	YFR027W	PDC1	P06169	563 aa	Known RBP	5.41	□□□□□ -1.54
ECO1	YFR027W	KXD1	P53158	218 aa		5.41	□□□□□ -1.54
ECO1	YFR027W	PUS6	P53294	404 aa		5.41	□□□□□ -1.54
ECO1	YFR027W	OPT2	Q06593	877 aa		5.41	□□□□□ -1.54
ECO1	YFR027W	TRM1	P15565	570 aa	Known RBP	5.4	□□□□□ -1.54
ECO1	YFR027W	YJU3	P28321	313 aa		5.4	□□□□□ -1.54
ECO1	YFR027W	RSC30	P38781	883 aa		5.4	□□□□□ -1.54
ECO1	YFR027W	PTK2	P47116	818 aa	Known RBP	5.4	□□□□□ -1.54
ECO1	YFR027W	SYH1	Q02875	849 aa	Known RBP	5.4	□□□□□ -1.54
ECO1	YFR027W	PKH3	Q03306	898 aa	Predicted RBP	5.39	□□□□□ -1.55
ECO1	YFR027W	MTC5	Q03897	1148 aa		5.39	□□□□□ -1.55
ECO1	YFR027W	UGA3	P26370	528 aa		5.37	□□□□□ -1.55
ECO1	YFR027W	RPA14	P50106	137 aa		5.37	□□□□□ -1.55

Retrieved 100 of 5,963 RNA–protein pairs in 8.9 ms