RNA–Protein interactions for RNA: YDL091C

UBX3, Transcript of Subunit of the DSC ubiquitin ligase complex, yeastyeast

Gene UBX3, Length 1,368 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBX3YDL091C TY1A-ER2P0CX66 440 aa7.1□□□□□ -1.27
UBX3YDL091C TY1A-GR3P0CX67 440 aa7.1□□□□□ -1.27
UBX3YDL091C TY1A-LR1P0CX68 440 aa7.1□□□□□ -1.27
UBX3YDL091C TY1A-MR2P0CX69 440 aa7.1□□□□□ -1.27
UBX3YDL091C GCD11P32481 527 aaKnown RBP7.1□□□□□ -1.27
UBX3YDL091C CST6P40535 587 aa7.1□□□□□ -1.27
UBX3YDL091C MVP1P40959 511 aaKnown RBP7.1□□□□□ -1.27
UBX3YDL091C TY1A-JR2P47099 440 aa7.1□□□□□ -1.27
UBX3YDL091C TY1A-DR1Q03856 440 aa7.1□□□□□ -1.27
UBX3YDL091C TY1A-ML1Q04706 440 aaKnown RBP7.1□□□□□ -1.27
UBX3YDL091C TY1A-BRQ12217 440 aa7.1□□□□□ -1.27
UBX3YDL091C MAM3Q12296 706 aa7.1□□□□□ -1.27
UBX3YDL091C TY1A-NL2Q12470 440 aa7.1□□□□□ -1.27
UBX3YDL091C TY1A-GR2Q12485 440 aa7.1□□□□□ -1.27
UBX3YDL091C AIR1P40507 360 aaKnown RBP7.08□□□□□ -1.28
UBX3YDL091C CLA4P48562 842 aa7.08□□□□□ -1.28
UBX3YDL091C YPR109WQ06104 294 aa7.07□□□□□ -1.28
UBX3YDL091C RGR1P19263 1082 aa7.06□□□□□ -1.28
UBX3YDL091C SPT16P32558 1035 aaKnown RBP7.06□□□□□ -1.28
UBX3YDL091C IES2P40154 320 aa7.06□□□□□ -1.28
UBX3YDL091C LAM6Q08001 693 aa7.06□□□□□ -1.28
UBX3YDL091C NUP42P49686 430 aaKnown RBP7.04□□□□□ -1.28
UBX3YDL091C BRE2P43132 505 aa7.03□□□□□ -1.28
UBX3YDL091C PSE1P32337 1089 aaKnown RBP7.02□□□□□ -1.29
UBX3YDL091C RRN7P40992 514 aa7.01□□□□□ -1.29
UBX3YDL091C FRK1Q03002 865 aaPredicted RBP7.01□□□□□ -1.29
UBX3YDL091C YPL062WQ02781 134 aa7□□□□□ -1.29
UBX3YDL091C GCR2Q01722 534 aa6.99□□□□□ -1.29
UBX3YDL091C DIT2P21595 489 aa6.98□□□□□ -1.29
UBX3YDL091C BDP1P46678 594 aa6.98□□□□□ -1.29
UBX3YDL091C PAT1P25644 796 aaKnown RBP6.97□□□□□ -1.29
UBX3YDL091C ERF2Q06551 359 aa6.97□□□□□ -1.29
UBX3YDL091C CDC4P07834 779 aa6.96□□□□□ -1.29
UBX3YDL091C LEU3P08638 886 aa6.96□□□□□ -1.29
UBX3YDL091C KEX2P13134 814 aa6.95□□□□□ -1.3
UBX3YDL091C GAR1P28007 205 aaKnown RBP6.94□□□□□ -1.3
UBX3YDL091C YNR021WP53723 404 aaKnown RBP6.94□□□□□ -1.3
UBX3YDL091C CLB5P30283 435 aa6.93□□□□□ -1.3
UBX3YDL091C HED1Q03937 162 aa6.93□□□□□ -1.3
UBX3YDL091C PAC1P39946 494 aaKnown RBP6.89□□□□□ -1.31
UBX3YDL091C MOD5P07884 428 aa6.87□□□□□ -1.31
UBX3YDL091C GBP2P25555 427 aaKnown RBP RIP-Chip data6.87□□□□□ -1.31not detected
UBX3YDL091C MET22P32179 357 aa6.87□□□□□ -1.31
UBX3YDL091C TEA1P47988 759 aa6.87□□□□□ -1.31
UBX3YDL091C AGE1Q04412 482 aa6.87□□□□□ -1.31
UBX3YDL091C GLC3P32775 704 aa6.85□□□□□ -1.31
UBX3YDL091C TUB4P53378 473 aa6.85□□□□□ -1.31
UBX3YDL091C AIM7Q12156 149 aa6.85□□□□□ -1.31
UBX3YDL091C ATF2P53296 535 aa6.84□□□□□ -1.31
UBX3YDL091C ENV9Q08651 330 aa6.83□□□□□ -1.32
UBX3YDL091C MET32Q12041 191 aa6.83□□□□□ -1.32
UBX3YDL091C ASH1P34233 588 aa6.82□□□□□ -1.32
UBX3YDL091C SIT4P20604 311 aa6.82□□□□□ -1.32
UBX3YDL091C RPN1P38764 993 aaKnown RBP6.81□□□□□ -1.32
UBX3YDL091C RTF1P53064 558 aa6.81□□□□□ -1.32
UBX3YDL091C NIS1P53939 407 aa6.81□□□□□ -1.32
UBX3YDL091C PUS5Q06244 254 aa6.81□□□□□ -1.32
UBX3YDL091C YNL115CP53925 644 aa6.8□□□□□ -1.32
UBX3YDL091C AFT1P22149 690 aa6.79□□□□□ -1.32
UBX3YDL091C YDR444WQ04093 687 aa6.79□□□□□ -1.32
UBX3YDL091C HST3P53687 447 aa6.77□□□□□ -1.33
UBX3YDL091C FPK1P53739 893 aa6.77□□□□□ -1.33
UBX3YDL091C HST2P53686 357 aa6.74□□□□□ -1.33
UBX3YDL091C LCB5Q06147 687 aaKnown RBP6.74□□□□□ -1.33
UBX3YDL091C KIN1P13185 1064 aa6.73□□□□□ -1.33
UBX3YDL091C YMR196WQ04336 1088 aa6.73□□□□□ -1.33
UBX3YDL091C KXD1P53158 218 aa6.72□□□□□ -1.33
UBX3YDL091C TPD3P31383 635 aa6.71□□□□□ -1.33
UBX3YDL091C YDL176WQ12027 708 aa6.71□□□□□ -1.33
UBX3YDL091C HXT10P43581 546 aa6.7□□□□□ -1.34
UBX3YDL091C YJR115WP47152 169 aa6.7□□□□□ -1.34
UBX3YDL091C RRD1P40454 393 aaKnown RBP6.69□□□□□ -1.34
UBX3YDL091C SLY41P22215 453 aa6.69□□□□□ -1.34
UBX3YDL091C GLN1P32288 370 aaKnown RBP6.69□□□□□ -1.34
UBX3YDL091C MMP1Q12372 583 aa6.69□□□□□ -1.34
UBX3YDL091C PDC1P06169 563 aaKnown RBP6.68□□□□□ -1.34
UBX3YDL091C SCJ1P25303 377 aa6.68□□□□□ -1.34
UBX3YDL091C KTR1P27810 393 aaKnown RBP6.67□□□□□ -1.34
UBX3YDL091C CSN12P47130 423 aa6.67□□□□□ -1.34
UBX3YDL091C SYH1Q02875 849 aaKnown RBP6.66□□□□□ -1.34
UBX3YDL091C LEO1P38439 464 aa6.65□□□□□ -1.35
UBX3YDL091C MSB3P48566 633 aaPredicted RBP6.65□□□□□ -1.35
UBX3YDL091C TYW1Q08960 810 aaKnown RBP6.65□□□□□ -1.35
UBX3YDL091C BUB1P41695 1021 aaKnown RBP RIP-Chip data6.64□□□□□ -1.35not detected
UBX3YDL091C ESS1P22696 170 aa6.63□□□□□ -1.35
UBX3YDL091C PUS6P53294 404 aa6.63□□□□□ -1.35
UBX3YDL091C SSA2P10592 639 aaKnown RBP6.61□□□□□ -1.35
UBX3YDL091C TRM1P15565 570 aaKnown RBP6.61□□□□□ -1.35
UBX3YDL091C YJU3P28321 313 aa6.6□□□□□ -1.35
UBX3YDL091C GUA1P38625 525 aaKnown RBP6.6□□□□□ -1.35
UBX3YDL091C RPA14P50106 137 aa6.6□□□□□ -1.35
UBX3YDL091C RSC30P38781 883 aa6.59□□□□□ -1.35
UBX3YDL091C YPR097WQ06839 1073 aa6.59□□□□□ -1.35
UBX3YDL091C ALR1Q08269 859 aa6.59□□□□□ -1.35
UBX3YDL091C YDL206WQ12424 762 aa6.59□□□□□ -1.35
UBX3YDL091C UGA3P26370 528 aa6.58□□□□□ -1.36
UBX3YDL091C TBF1Q02457 562 aa6.58□□□□□ -1.36
UBX3YDL091C PKH3Q03306 898 aaPredicted RBP6.58□□□□□ -1.36
UBX3YDL091C KIP2P28743 706 aa6.57□□□□□ -1.36
UBX3YDL091C PTK2P47116 818 aaKnown RBP6.57□□□□□ -1.36
Retrieved 100 of 5,963 RNA–protein pairs in 16 ms