RNA–Protein interactions for RNA: YDL091C

UBX3, Transcript of Subunit of the DSC ubiquitin ligase complex, yeastyeast

Gene UBX3, Length 1,368 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBX3YDL091C MTC1P47018 478 aaKnown RBP13.93□□□□□ -0.18
UBX3YDL091C FAP1P53971 965 aa13□□□□□ -0.33
UBX3YDL091C DRS1P32892 752 aaKnown RBP12.56□□□□□ -0.4
UBX3YDL091C PRY3P47033 881 aa12.24□□□□□ -0.45
UBX3YDL091C PRI1P10363 409 aa11.99□□□□□ -0.49
UBX3YDL091C AAD16Q02895 342 aa11.95□□□□□ -0.5
UBX3YDL091C ISW2Q08773 1120 aa11.62□□□□□ -0.55
UBX3YDL091C YCK3P39962 524 aa11.59□□□□□ -0.55
UBX3YDL091C RPG1P38249 964 aaKnown RBP11.54□□□□□ -0.56
UBX3YDL091C HAA1Q12753 694 aaKnown RBP11.46□□□□□ -0.57
UBX3YDL091C TSR3Q12094 313 aaKnown RBP11.3□□□□□ -0.6
UBX3YDL091C DIP2Q12220 943 aaPredicted RBP11.18□□□□□ -0.62
UBX3YDL091C RSE1Q04693 1361 aaKnown RBP10.92□□□□□ -0.66
UBX3YDL091C MRPL32P25348 183 aa10.86□□□□□ -0.67
UBX3YDL091C AVT3P36062 692 aa10.65□□□□□ -0.7
UBX3YDL091C RPL17AP05740 184 aaKnown RBP10.61□□□□□ -0.71
UBX3YDL091C RPL17BP46990 184 aaKnown RBP10.61□□□□□ -0.71
UBX3YDL091C REB1P21538 810 aa10.58□□□□□ -0.72
UBX3YDL091C YGL015CP33199 130 aa10.54□□□□□ -0.72
UBX3YDL091C BFR2Q06631 534 aaKnown RBP10.36□□□□□ -0.75
UBX3YDL091C CDC27P38042 758 aa10.26□□□□□ -0.77
UBX3YDL091C SPT21P35209 758 aa10.13□□□□□ -0.79
UBX3YDL091C YKR023WP36119 530 aaKnown RBP10.13□□□□□ -0.79
UBX3YDL091C BUD31P25337 157 aaPredicted RBP10.05□□□□□ -0.8
UBX3YDL091C UBP10P53874 792 aaPredicted RBP10□□□□□ -0.81
UBX3YDL091C MAP2P38174 421 aaKnown RBP9.98□□□□□ -0.81
UBX3YDL091C TFC8Q12308 588 aa9.91□□□□□ -0.82
UBX3YDL091C HOP09932 586 aa9.9□□□□□ -0.82
UBX3YDL091C DCD1P06773 312 aa9.88□□□□□ -0.83
UBX3YDL091C RIM101P33400 625 aa9.69□□□□□ -0.86
UBX3YDL091C SCY1P53009 804 aa9.69□□□□□ -0.86
UBX3YDL091C SLX5P32828 619 aaKnown RBP9.59□□□□□ -0.87
UBX3YDL091C TIF4632P39936 914 aaKnown RBP9.59□□□□□ -0.87
UBX3YDL091C BCH2P36122 765 aa9.57□□□□□ -0.88
UBX3YDL091C TGL3P40308 642 aa9.57□□□□□ -0.88
UBX3YDL091C TFA1P36100 482 aa9.49□□□□□ -0.89
UBX3YDL091C SIS1P25294 352 aaKnown RBP9.41□□□□□ -0.9
UBX3YDL091C UBP9P39967 754 aa9.38□□□□□ -0.91
UBX3YDL091C OXP1P28273 1286 aa9.36□□□□□ -0.91
UBX3YDL091C EPS1P40557 701 aa9.29□□□□□ -0.92
UBX3YDL091C BDF1P35817 686 aa9.27□□□□□ -0.93
UBX3YDL091C YIL055CP40523 627 aaKnown RBP9.2□□□□□ -0.94
UBX3YDL091C PTP3P40048 928 aa9.19□□□□□ -0.94
UBX3YDL091C MST1P07236 462 aa9.12□□□□□ -0.95
UBX3YDL091C RSM7P47150 247 aa9.07□□□□□ -0.96
UBX3YDL091C YOR238WQ08634 303 aa9.06□□□□□ -0.96
UBX3YDL091C BBC1P47068 1157 aa9.04□□□□□ -0.96
UBX3YDL091C AI2P03876 854 aa9.02□□□□□ -0.97
UBX3YDL091C YBL029C-AQ3E756 94 aa9.02□□□□□ -0.97
UBX3YDL091C NSR1P27476 414 aaKnown RBP RIP-Chip data9.01□□□□□ -0.97not detected
UBX3YDL091C YAH1Q12184 172 aaKnown RBP8.99□□□□□ -0.97
UBX3YDL091C YAP5P40574 245 aa8.93□□□□□ -0.98
UBX3YDL091C VNX1P42839 908 aa8.93□□□□□ -0.98
UBX3YDL091C YLR271WQ06152 274 aa8.85□□□□□ -0.99
UBX3YDL091C WSC3Q12215 556 aa8.83□□□□□ -1
UBX3YDL091C SPP1Q03012 353 aa8.82□□□□□ -1
UBX3YDL091C PSD2P53037 1138 aaKnown RBP8.75□□□□□ -1.01
UBX3YDL091C TIF11P38912 153 aaKnown RBP8.73□□□□□ -1.01
UBX3YDL091C GTT3P39996 337 aa8.73□□□□□ -1.01
UBX3YDL091C AIR2Q12476 344 aaKnown RBP8.69□□□□□ -1.02
UBX3YDL091C MRM1P25270 412 aa8.67□□□□□ -1.02
UBX3YDL091C PIB1Q06651 286 aa8.67□□□□□ -1.02
UBX3YDL091C FKH1P40466 484 aa8.65□□□□□ -1.02
UBX3YDL091C SSP1P38871 571 aa8.61□□□□□ -1.03
UBX3YDL091C YJL171CP46992 396 aa8.61□□□□□ -1.03
UBX3YDL091C ULI1P43604 169 aa8.61□□□□□ -1.03
UBX3YDL091C IOC2Q12072 812 aa8.6□□□□□ -1.03
UBX3YDL091C LDB19Q12502 818 aa8.6□□□□□ -1.03
UBX3YDL091C ARP8Q12386 881 aaKnown RBP RIP-Chip data8.59□□□□□ -1.03not detected
UBX3YDL091C MSB4Q12317 492 aa8.52□□□□□ -1.05
UBX3YDL091C VPS29P38759 282 aa8.51□□□□□ -1.05
UBX3YDL091C CST9Q06032 482 aa8.51□□□□□ -1.05
UBX3YDL091C YMR1P47147 688 aaKnown RBP RIP-Chip data8.49□□□□□ -1.05not detected
UBX3YDL091C DBP1P24784 617 aaKnown RBP8.48□□□□□ -1.05
UBX3YDL091C EAP1P36041 632 aaKnown RBP8.48□□□□□ -1.05
UBX3YDL091C YOL036WQ08206 761 aa8.48□□□□□ -1.05
UBX3YDL091C BMT6Q12291 365 aa8.48□□□□□ -1.05
UBX3YDL091C RTG3P38165 486 aa8.47□□□□□ -1.05
UBX3YDL091C SET4P42948 560 aa8.46□□□□□ -1.06
UBX3YDL091C MGA2P40578 1113 aa8.45□□□□□ -1.06
UBX3YDL091C YFR006WP43590 535 aa8.45□□□□□ -1.06
UBX3YDL091C TRP5P00931 707 aaKnown RBP8.43□□□□□ -1.06
UBX3YDL091C RTG1P32607 177 aa8.41□□□□□ -1.06
UBX3YDL091C STS1P38637 319 aa8.41□□□□□ -1.06
UBX3YDL091C VMA1P17255 1071 aaKnown RBP8.4□□□□□ -1.06
UBX3YDL091C SAM3Q08986 587 aa8.37□□□□□ -1.07
UBX3YDL091C NCR1Q12200 1170 aa8.37□□□□□ -1.07
UBX3YDL091C RCR1P38212 213 aa8.35□□□□□ -1.07
UBX3YDL091C YNL035CP53962 389 aaKnown RBP8.35□□□□□ -1.07
UBX3YDL091C SEC61P32915 480 aa8.34□□□□□ -1.07
UBX3YDL091C DAN4P47179 1161 aa8.23□□□□□ -1.09
UBX3YDL091C GYP5Q12344 894 aa8.23□□□□□ -1.09
UBX3YDL091C ABP1P15891 592 aaKnown RBP8.22□□□□□ -1.09
UBX3YDL091C TFG1P41895 735 aaPredicted RBP8.22□□□□□ -1.09
UBX3YDL091C JIP4Q03361 876 aa8.22□□□□□ -1.09
UBX3YDL091C HTA1P04911 132 aaKnown RBP8.17□□□□□ -1.1
UBX3YDL091C HTA2P04912 132 aa8.17□□□□□ -1.1
UBX3YDL091C DCW1P36091 449 aa8.17□□□□□ -1.1
UBX3YDL091C SAP30P38429 201 aa8.17□□□□□ -1.1
UBX3YDL091C YDL129WQ07555 291 aa8.15□□□□□ -1.1
Retrieved 100 of 5,963 RNA–protein pairs in 13.2 ms