RNA–Protein interactions for RNA: ENST00000630858.2

DDX3X-221, Transcript of DEAD-box helicase 3 X-linked, humanhuman

TSL 5

Gene DDX3X, Length 3,181 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX3X-221ENST00000630858 C11orf95C9JLR9 678 aaPredicted RBP13.28□□□□□ -0.28
DDX3X-221ENST00000630858 POLR3GLQ9BT43 218 aa13.28□□□□□ -0.28
DDX3X-221ENST00000630858 PCF11O94913 1555 aaKnown RBP13.27□□□□□ -0.28
DDX3X-221ENST00000630858 EFCAB5A4FU69 1503 aa13.27□□□□□ -0.29
DDX3X-221ENST00000630858 NUDCQ9Y266 331 aa13.26□□□□□ -0.29
DDX3X-221ENST00000630858 SAMD9Q5K651 1589 aa13.25□□□□□ -0.29
DDX3X-221ENST00000630858 MAGI1Q96QZ7 1491 aaPredicted RBP13.25□□□□□ -0.29
DDX3X-221ENST00000630858 RRP7BPQ9NSQ0 103 aa13.25□□□□□ -0.29
DDX3X-221ENST00000630858 FGD6Q6ZV73 1430 aa13.25□□□□□ -0.29
DDX3X-221ENST00000630858 CCDC7Q96M83 1385 aa13.25□□□□□ -0.29
DDX3X-221ENST00000630858 GRIN2AQ12879 1464 aa13.24□□□□□ -0.29
DDX3X-221ENST00000630858 HFM1A2PYH4 1435 aa13.24□□□□□ -0.29
DDX3X-221ENST00000630858 PTPRKQ15262 1439 aa13.24□□□□□ -0.29
DDX3X-221ENST00000630858 EIF5BO60841 1220 aaKnown RBP13.24□□□□□ -0.29
DDX3X-221ENST00000630858 NCOA2Q15596 1464 aa13.24□□□□□ -0.29
DDX3X-221ENST00000630858 MTUS2Q5JR59 1369 aa13.23□□□□□ -0.29
DDX3X-221ENST00000630858 CFAP43Q8NDM7 1665 aa13.23□□□□□ -0.29
DDX3X-221ENST00000630858 IQGAP2Q13576 1575 aa13.23□□□□□ -0.29
DDX3X-221ENST00000630858 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.23□□□□□ -0.292e-8■■□□□ 11.4
DDX3X-221ENST00000630858 SMG6Q86US8 1419 aaKnown RBP13.23□□□□□ -0.29
DDX3X-221ENST00000630858 SYNJ2O15056 1496 aa13.22□□□□□ -0.29
DDX3X-221ENST00000630858 KDM5BQ9UGL1 1544 aa13.22□□□□□ -0.29
DDX3X-221ENST00000630858 L3MBTL2Q969R5 705 aa13.22□□□□□ -0.29
DDX3X-221ENST00000630858 PTPN23Q9H3S7 1636 aa13.21□□□□□ -0.3
DDX3X-221ENST00000630858 FMN1Q68DA7 1419 aa13.21□□□□□ -0.3
DDX3X-221ENST00000630858 NAIPQ13075 1403 aa13.2□□□□□ -0.3
DDX3X-221ENST00000630858 FOXD1Q16676 465 aa13.2□□□□□ -0.3
DDX3X-221ENST00000630858 BRPF3Q9ULD4 1205 aa13.19□□□□□ -0.3
DDX3X-221ENST00000630858 CEP170Q5SW79 1584 aa13.19□□□□□ -0.3
DDX3X-221ENST00000630858 CHMP7Q8WUX9 453 aaPredicted RBP13.19□□□□□ -0.3
DDX3X-221ENST00000630858 USP35Q9P2H5 1018 aa13.18□□□□□ -0.3
DDX3X-221ENST00000630858 NCOA1Q15788 1441 aa13.18□□□□□ -0.3
DDX3X-221ENST00000630858 KIF7Q2M1P5 1343 aa13.18□□□□□ -0.3
DDX3X-221ENST00000630858 KIAA0586Q9BVV6 1533 aa13.18□□□□□ -0.3
DDX3X-221ENST00000630858 FBLN2P98095 1184 aa13.18□□□□□ -0.3
DDX3X-221ENST00000630858 PPM1GO15355 546 aaPredicted RBP13.17□□□□□ -0.3
DDX3X-221ENST00000630858 PDE4AP27815 886 aa13.17□□□□□ -0.3
DDX3X-221ENST00000630858 FYCO1Q9BQS8 1478 aa13.16□□□□□ -0.3
DDX3X-221ENST00000630858 UGGT2Q9NYU1 1516 aa13.16□□□□□ -0.3
DDX3X-221ENST00000630858 CASKIN1Q8WXD9 1431 aa13.15□□□□□ -0.3
DDX3X-221ENST00000630858 RNF123Q5XPI4 1314 aa13.15□□□□□ -0.3
DDX3X-221ENST00000630858 TCERG1O14776 1098 aaKnown RBP13.15□□□□□ -0.3
DDX3X-221ENST00000630858 EXOC6Q8TAG9 804 aa13.15□□□□□ -0.3
DDX3X-221ENST00000630858 LRRIQ1Q96JM4 1722 aa13.14□□□□□ -0.31
DDX3X-221ENST00000630858 NUP160Q12769 1436 aa13.14□□□□□ -0.31
DDX3X-221ENST00000630858 NBPF8Q3BBV2 869 aa13.14□□□□□ -0.31
DDX3X-221ENST00000630858 UBE2Q2Q8WVN8 375 aa13.14□□□□□ -0.31
DDX3X-221ENST00000630858 TMC1Q8TDI8 760 aa13.13□□□□□ -0.31
DDX3X-221ENST00000630858 DISP1Q96F81 1524 aa13.13□□□□□ -0.31
DDX3X-221ENST00000630858 MPHOSPH9Q99550 1183 aa13.13□□□□□ -0.31
DDX3X-221ENST00000630858 WASHC2CQ9Y4E1 1318 aa13.12□□□□□ -0.31
DDX3X-221ENST00000630858 GSE1Q14687 1217 aa13.12□□□□□ -0.31
DDX3X-221ENST00000630858 ZNF326Q5BKZ1 582 aaKnown RBP13.12□□□□□ -0.31
DDX3X-221ENST00000630858 BACH2Q9BYV9 841 aa13.11□□□□□ -0.31
DDX3X-221ENST00000630858 KIAA0556O60303 1618 aa13.1□□□□□ -0.31
DDX3X-221ENST00000630858 DAXXQ9UER7 740 aaPredicted RBP13.1□□□□□ -0.31
DDX3X-221ENST00000630858 CHD1O14646 1710 aa13.1□□□□□ -0.31
DDX3X-221ENST00000630858 RRP1P56182 461 aaKnown RBP13.1□□□□□ -0.31
DDX3X-221ENST00000630858 MYOM3Q5VTT5 1437 aa13.09□□□□□ -0.31
DDX3X-221ENST00000630858 SLC4A3P48751 1232 aa13.09□□□□□ -0.31
DDX3X-221ENST00000630858 SKAP1Q86WV1 359 aa13.08□□□□□ -0.32
DDX3X-221ENST00000630858 DDRGK1Q96HY6 314 aa13.07□□□□□ -0.32
DDX3X-221ENST00000630858 NFKBIBQ15653 356 aa13.06□□□□□ -0.32
DDX3X-221ENST00000630858 RCAN3Q9UKA8 241 aa13.06□□□□□ -0.32
DDX3X-221ENST00000630858 PNISRQ8TF01 805 aaKnown RBP13.06□□□□□ -0.32
DDX3X-221ENST00000630858 FRAT1Q92837 279 aaPredicted RBP13.06□□□□□ -0.32
DDX3X-221ENST00000630858 DENND4BO75064 1496 aaPredicted RBP13.06□□□□□ -0.32
DDX3X-221ENST00000630858 ZNF777Q9ULD5 760 aaPredicted RBP13.06□□□□□ -0.32
DDX3X-221ENST00000630858 JPH4Q96JJ6 628 aa13.05□□□□□ -0.32
DDX3X-221ENST00000630858 MS4A1P11836 297 aa13.05□□□□□ -0.32
DDX3X-221ENST00000630858 DHX29Q7Z478 1369 aaKnown RBP13.04□□□□□ -0.32
DDX3X-221ENST00000630858 HECW1Q76N89 1606 aa13.02□□□□□ -0.33
DDX3X-221ENST00000630858 SLC4A1APQ9BWU0 796 aaKnown RBP13.02□□□□□ -0.33
DDX3X-221ENST00000630858 PLIN1O60240 522 aa13.01□□□□□ -0.33
DDX3X-221ENST00000630858 MAGI3Q5TCQ9 1506 aa13.01□□□□□ -0.33
DDX3X-221ENST00000630858 SPATA31E1Q6ZUB1 1445 aa13□□□□□ -0.33
DDX3X-221ENST00000630858 KDM6BO15054 1643 aa13□□□□□ -0.33
DDX3X-221ENST00000630858 EPRSP07814 1512 aaKnown RBP13□□□□□ -0.33
DDX3X-221ENST00000630858 CDK13Q14004 1512 aaKnown RBP12.99□□□□□ -0.33
DDX3X-221ENST00000630858 USP47Q96K76 1375 aa12.98□□□□□ -0.33
DDX3X-221ENST00000630858 RAPGEF6Q8TEU7 1601 aa12.98□□□□□ -0.33
DDX3X-221ENST00000630858 CARMIL2Q6F5E8 1435 aa12.98□□□□□ -0.33
DDX3X-221ENST00000630858 ZNF644Q9H582 1327 aaPredicted RBP12.97□□□□□ -0.33
DDX3X-221ENST00000630858 NUP153P49790 1475 aaKnown RBP12.97□□□□□ -0.33
DDX3X-221ENST00000630858 RPRD2Q5VT52 1461 aaKnown RBP12.97□□□□□ -0.33
DDX3X-221ENST00000630858 ANKRD30BQ9BXX2 1392 aa12.97□□□□□ -0.33
DDX3X-221ENST00000630858 SUPT6HQ7KZ85 1726 aaKnown RBP12.97□□□□□ -0.33
DDX3X-221ENST00000630858 PLB1Q6P1J6 1458 aa12.97□□□□□ -0.33
DDX3X-221ENST00000630858 PRG4Q92954 1404 aaPredicted RBP12.96□□□□□ -0.33
DDX3X-221ENST00000630858 SHROOM2Q13796 1616 aa12.96□□□□□ -0.33
DDX3X-221ENST00000630858 FRAT2O75474 233 aaPredicted RBP12.95□□□□□ -0.34
DDX3X-221ENST00000630858 CDCA7LQ96GN5 454 aa12.95□□□□□ -0.34
DDX3X-221ENST00000630858 CRBNQ96SW2 442 aa12.95□□□□□ -0.34
DDX3X-221ENST00000630858 TEX14Q8IWB6 1497 aa12.95□□□□□ -0.34
DDX3X-221ENST00000630858 EHBP1L1Q8N3D4 1523 aa12.94□□□□□ -0.34
DDX3X-221ENST00000630858 RSPH6AQ9H0K4 717 aa12.94□□□□□ -0.34
DDX3X-221ENST00000630858 MIA2Q96PC5 1412 aa12.93□□□□□ -0.34
DDX3X-221ENST00000630858 GCC2Q8IWJ2 1684 aa12.93□□□□□ -0.34
DDX3X-221ENST00000630858 MYBBP1AQ9BQG0 1328 aaKnown RBP12.93□□□□□ -0.34
DDX3X-221ENST00000630858 ERCC6L2Q5T890 1561 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms